Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm24551-201ENSMUST00000158645 92 ntBASIC1.68□□□□□ -2.14
Usp47Q8BY87 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC1.68□□□□□ -2.14
Usp47Q8BY87 Gm27511-201ENSMUST00000183502 127 ntBASIC1.68□□□□□ -2.14
Usp47Q8BY87 Mir7667-201ENSMUST00000183866 63 ntBASIC1.68□□□□□ -2.14
Usp47Q8BY87 Gm27942-201ENSMUST00000184669 101 ntBASIC1.68□□□□□ -2.14
Usp47Q8BY87 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Usp47Q8BY87 Gm37743-201ENSMUST00000194645 376 ntBASIC1.68□□□□□ -2.14
Usp47Q8BY87 Gm31520-201ENSMUST00000203048 733 ntBASIC1.68□□□□□ -2.14
Usp47Q8BY87 AC130222.1-201ENSMUST00000221198 256 ntBASIC1.68□□□□□ -2.14
Usp47Q8BY87 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Usp47Q8BY87 CT010480.1-201ENSMUST00000223612 363 ntBASIC1.68□□□□□ -2.14
Usp47Q8BY87 Gm25755-201ENSMUST00000083396 107 ntBASIC1.68□□□□□ -2.14
Usp47Q8BY87 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC1.68□□□□□ -2.14
Usp47Q8BY87 Gm14405-201ENSMUST00000117808 2330 ntBASIC1.68□□□□□ -2.14
Usp47Q8BY87 Gm1980-201ENSMUST00000123131 2306 ntBASIC1.68□□□□□ -2.14
Usp47Q8BY87 AC122887.2-201ENSMUST00000219465 1603 ntBASIC1.67□□□□□ -2.14
Usp47Q8BY87 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Usp47Q8BY87 Gm37761-201ENSMUST00000194989 2098 ntBASIC1.67□□□□□ -2.14
Usp47Q8BY87 Gm24865-201ENSMUST00000103246 96 ntBASIC1.67□□□□□ -2.14
Usp47Q8BY87 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Usp47Q8BY87 Mir873a-201ENSMUST00000104863 77 ntBASIC1.67□□□□□ -2.14
Usp47Q8BY87 Gm11784-201ENSMUST00000118568 474 ntBASIC1.67□□□□□ -2.14
Usp47Q8BY87 Gm15279-201ENSMUST00000155593 288 ntBASIC1.67□□□□□ -2.14
Usp47Q8BY87 Gm25220-201ENSMUST00000157546 95 ntBASIC1.67□□□□□ -2.14
Usp47Q8BY87 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC1.67□□□□□ -2.14
Usp47Q8BY87 Gm18964-201ENSMUST00000193013 563 ntBASIC1.67□□□□□ -2.14
Usp47Q8BY87 Gm43955-201ENSMUST00000204332 142 ntBASIC1.67□□□□□ -2.14
Usp47Q8BY87 AC124182.1-201ENSMUST00000227091 321 ntBASIC1.67□□□□□ -2.14
Usp47Q8BY87 Gm22061-201ENSMUST00000082557 107 ntBASIC1.67□□□□□ -2.14
Usp47Q8BY87 n-R5s79-201ENSMUST00000083071 120 ntBASIC1.67□□□□□ -2.14
Usp47Q8BY87 Gm37061-201ENSMUST00000195066 3243 ntBASIC1.67□□□□□ -2.14
Usp47Q8BY87 Gm15452-201ENSMUST00000119877 240 ntBASIC1.66□□□□□ -2.14
Usp47Q8BY87 Gm11785-201ENSMUST00000120165 601 ntBASIC1.66□□□□□ -2.14
Usp47Q8BY87 Gm12045-201ENSMUST00000122122 573 ntBASIC1.66□□□□□ -2.14
Usp47Q8BY87 n-R5s189-201ENSMUST00000122675 114 ntBASIC1.66□□□□□ -2.14
Usp47Q8BY87 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC1.66□□□□□ -2.14
Usp47Q8BY87 Gm22098-201ENSMUST00000157930 85 ntBASIC1.66□□□□□ -2.14
Usp47Q8BY87 Gm25334-201ENSMUST00000158036 110 ntBASIC1.66□□□□□ -2.14
Usp47Q8BY87 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC1.66□□□□□ -2.14
Usp47Q8BY87 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC1.66□□□□□ -2.14
Usp47Q8BY87 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC1.66□□□□□ -2.14
Usp47Q8BY87 Gm24264-201ENSMUST00000179835 94 ntBASIC1.66□□□□□ -2.14
Usp47Q8BY87 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC1.66□□□□□ -2.14
Usp47Q8BY87 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC1.66□□□□□ -2.14
Usp47Q8BY87 Gm27676-201ENSMUST00000183669 61 ntBASIC1.66□□□□□ -2.14
Usp47Q8BY87 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC1.66□□□□□ -2.14
Usp47Q8BY87 Mir7215-201ENSMUST00000200383 51 ntBASIC1.66□□□□□ -2.14
Usp47Q8BY87 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC1.66□□□□□ -2.14
Usp47Q8BY87 Gm45439-201ENSMUST00000211723 359 ntBASIC1.66□□□□□ -2.14
Usp47Q8BY87 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC1.66□□□□□ -2.14
Usp47Q8BY87 Gm6109-201ENSMUST00000223297 348 ntBASIC1.66□□□□□ -2.14
Usp47Q8BY87 AC168062.2-201ENSMUST00000228907 422 ntBASIC1.66□□□□□ -2.14
Usp47Q8BY87 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
Usp47Q8BY87 Gm22247-201ENSMUST00000082476 131 ntBASIC1.66□□□□□ -2.14
Usp47Q8BY87 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC1.66□□□□□ -2.14
Usp47Q8BY87 Gm37941-201ENSMUST00000192170 2309 ntBASIC1.65□□□□□ -2.14
Usp47Q8BY87 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC1.65□□□□□ -2.15
Usp47Q8BY87 Gm15692-201ENSMUST00000152173 352 ntBASIC1.65□□□□□ -2.15
Usp47Q8BY87 Gm8207-201ENSMUST00000171204 502 ntBASIC1.65□□□□□ -2.15
Usp47Q8BY87 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC1.65□□□□□ -2.15
Usp47Q8BY87 Mir7663-201ENSMUST00000183950 61 ntBASIC1.65□□□□□ -2.15
Usp47Q8BY87 Gm5329-201ENSMUST00000186898 463 ntBASIC1.65□□□□□ -2.15
Usp47Q8BY87 Gm37000-201ENSMUST00000193058 428 ntBASIC1.65□□□□□ -2.15
Usp47Q8BY87 Gm44524-201ENSMUST00000203899 271 ntBASIC1.65□□□□□ -2.15
Usp47Q8BY87 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC1.65□□□□□ -2.15
Usp47Q8BY87 Olfr952-201ENSMUST00000073895 1056 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
Usp47Q8BY87 Gm24261-201ENSMUST00000083744 104 ntBASIC1.65□□□□□ -2.15
Usp47Q8BY87 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
Usp47Q8BY87 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC1.65□□□□□ -2.15
Usp47Q8BY87 Gm11813-201ENSMUST00000118586 291 ntBASIC1.64□□□□□ -2.15
Usp47Q8BY87 Gm14359-201ENSMUST00000118883 424 ntBASIC1.64□□□□□ -2.15
Usp47Q8BY87 Gm14360-201ENSMUST00000120670 393 ntBASIC1.64□□□□□ -2.15
Usp47Q8BY87 Gm9498-201ENSMUST00000140849 291 ntBASIC1.64□□□□□ -2.15
Usp47Q8BY87 Gm14368-201ENSMUST00000145305 415 ntBASIC1.64□□□□□ -2.15
Usp47Q8BY87 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC1.64□□□□□ -2.15
Usp47Q8BY87 Gm22382-201ENSMUST00000158185 130 ntBASIC1.64□□□□□ -2.15
Usp47Q8BY87 Gm24878-201ENSMUST00000158782 104 ntBASIC1.64□□□□□ -2.15
Usp47Q8BY87 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC1.64□□□□□ -2.15
Usp47Q8BY87 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC1.64□□□□□ -2.15
Usp47Q8BY87 Gm28011-201ENSMUST00000184097 175 ntBASIC1.64□□□□□ -2.15
Usp47Q8BY87 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
Usp47Q8BY87 Gm29600-201ENSMUST00000188687 377 ntBASIC1.64□□□□□ -2.15
Usp47Q8BY87 Gm21064-202ENSMUST00000190583 278 ntBASIC1.64□□□□□ -2.15
Usp47Q8BY87 Gm43708-201ENSMUST00000198857 961 ntBASIC1.64□□□□□ -2.15
Usp47Q8BY87 AL669916.3-201ENSMUST00000213855 94 ntBASIC1.64□□□□□ -2.15
Usp47Q8BY87 AL669916.6-201ENSMUST00000214610 94 ntBASIC1.64□□□□□ -2.15
Usp47Q8BY87 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC1.64□□□□□ -2.15
Usp47Q8BY87 AL669916.4-201ENSMUST00000215976 94 ntBASIC1.64□□□□□ -2.15
Usp47Q8BY87 AL669916.1-201ENSMUST00000217640 94 ntBASIC1.64□□□□□ -2.15
Usp47Q8BY87 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.64□□□□□ -2.15
Usp47Q8BY87 Gm35558-202ENSMUST00000221819 499 ntBASIC1.64□□□□□ -2.15
Usp47Q8BY87 Gm22980-201ENSMUST00000082608 70 ntBASIC1.64□□□□□ -2.15
Usp47Q8BY87 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC1.64□□□□□ -2.15
Usp47Q8BY87 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC1.63□□□□□ -2.15
Usp47Q8BY87 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.63□□□□□ -2.15
Usp47Q8BY87 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
Usp47Q8BY87 Gm25213-201ENSMUST00000102388 113 ntBASIC1.63□□□□□ -2.15
Usp47Q8BY87 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
Usp47Q8BY87 Gm14879-201ENSMUST00000117308 507 ntBASIC1.63□□□□□ -2.15
Usp47Q8BY87 Gm15112-201ENSMUST00000120152 860 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 94.5 ms