Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Gm23098-201ENSMUST00000157552 299 ntBASIC3.36□□□□□ -1.87
Prpf18Q8BM39 Gm25438-201ENSMUST00000158281 110 ntBASIC3.36□□□□□ -1.87
Prpf18Q8BM39 Gm23112-201ENSMUST00000158606 125 ntBASIC3.36□□□□□ -1.87
Prpf18Q8BM39 Gm8292-201ENSMUST00000162574 396 ntBASIC3.36□□□□□ -1.87
Prpf18Q8BM39 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Prpf18Q8BM39 Mir7676-1-201ENSMUST00000183491 62 ntBASIC3.36□□□□□ -1.87
Prpf18Q8BM39 Mir7676-2-201ENSMUST00000183523 62 ntBASIC3.36□□□□□ -1.87
Prpf18Q8BM39 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC3.36□□□□□ -1.87
Prpf18Q8BM39 Gm37428-201ENSMUST00000193886 137 ntBASIC3.36□□□□□ -1.87
Prpf18Q8BM39 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC3.36□□□□□ -1.87
Prpf18Q8BM39 Gm42832-201ENSMUST00000196361 745 ntBASIC3.36□□□□□ -1.87
Prpf18Q8BM39 AC132384.5-201ENSMUST00000218562 226 ntBASIC3.36□□□□□ -1.87
Prpf18Q8BM39 Gm10222-201ENSMUST00000088336 294 ntBASIC3.36□□□□□ -1.87
Prpf18Q8BM39 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Prpf18Q8BM39 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
Prpf18Q8BM39 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
Prpf18Q8BM39 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
Prpf18Q8BM39 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
Prpf18Q8BM39 Gm11936-201ENSMUST00000118323 160 ntBASIC3.35□□□□□ -1.87
Prpf18Q8BM39 Gm14352-201ENSMUST00000119250 449 ntBASIC3.35□□□□□ -1.87
Prpf18Q8BM39 Gm15263-201ENSMUST00000121556 642 ntBASIC3.35□□□□□ -1.87
Prpf18Q8BM39 Gm24629-201ENSMUST00000122762 89 ntBASIC3.35□□□□□ -1.87
Prpf18Q8BM39 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC3.35□□□□□ -1.87
Prpf18Q8BM39 Gm25184-201ENSMUST00000157753 163 ntBASIC3.35□□□□□ -1.87
Prpf18Q8BM39 Gm22447-201ENSMUST00000158155 92 ntBASIC3.35□□□□□ -1.87
Prpf18Q8BM39 Gm24348-201ENSMUST00000158710 130 ntBASIC3.35□□□□□ -1.87
Prpf18Q8BM39 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC3.35□□□□□ -1.87
Prpf18Q8BM39 Gm23047-201ENSMUST00000177661 94 ntBASIC3.35□□□□□ -1.87
Prpf18Q8BM39 Gm27648-201ENSMUST00000184315 107 ntBASIC3.35□□□□□ -1.87
Prpf18Q8BM39 Mir6914-201ENSMUST00000184999 69 ntBASIC3.35□□□□□ -1.87
Prpf18Q8BM39 Gm37713-201ENSMUST00000191746 198 ntBASIC3.35□□□□□ -1.87
Prpf18Q8BM39 Gm37343-201ENSMUST00000192542 111 ntBASIC3.35□□□□□ -1.87
Prpf18Q8BM39 Gm42570-201ENSMUST00000195937 292 ntBASIC3.35□□□□□ -1.87
Prpf18Q8BM39 Igkv9-128-201ENSMUST00000196602 353 ntBASIC3.35□□□□□ -1.87
Prpf18Q8BM39 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC3.35□□□□□ -1.87
Prpf18Q8BM39 AC164161.1-201ENSMUST00000214076 639 ntBASIC3.35□□□□□ -1.87
Prpf18Q8BM39 AC125379.1-201ENSMUST00000221928 111 ntBASIC3.35□□□□□ -1.87
Prpf18Q8BM39 AC140344.1-201ENSMUST00000223384 387 ntBASIC3.35□□□□□ -1.87
Prpf18Q8BM39 AC161758.2-201ENSMUST00000228513 218 ntBASIC3.35□□□□□ -1.87
Prpf18Q8BM39 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
Prpf18Q8BM39 Gm45130-201ENSMUST00000207574 3388 ntBASIC3.35□□□□□ -1.87
Prpf18Q8BM39 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.34□□□□□ -1.87
Prpf18Q8BM39 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Prpf18Q8BM39 Gm45039-201ENSMUST00000209181 3477 ntBASIC3.34□□□□□ -1.87
Prpf18Q8BM39 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC3.34□□□□□ -1.87
Prpf18Q8BM39 Gm25718-201ENSMUST00000158632 118 ntBASIC3.34□□□□□ -1.87
Prpf18Q8BM39 Mir5127-201ENSMUST00000175295 71 ntBASIC3.34□□□□□ -1.87
Prpf18Q8BM39 Gm23355-201ENSMUST00000177614 107 ntBASIC3.34□□□□□ -1.87
Prpf18Q8BM39 Mir713-201ENSMUST00000178651 108 ntBASIC3.34□□□□□ -1.87
Prpf18Q8BM39 Gm23148-201ENSMUST00000180367 107 ntBASIC3.34□□□□□ -1.87
Prpf18Q8BM39 Mir7028-201ENSMUST00000185016 64 ntBASIC3.34□□□□□ -1.87
Prpf18Q8BM39 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC3.34□□□□□ -1.87
Prpf18Q8BM39 Gm20058-201ENSMUST00000186939 284 ntBASIC3.34□□□□□ -1.87
Prpf18Q8BM39 Mir129b-201ENSMUST00000197461 65 ntBASIC3.34□□□□□ -1.87
Prpf18Q8BM39 AC158606.1-201ENSMUST00000220078 325 ntBASIC3.34□□□□□ -1.87
Prpf18Q8BM39 AC134596.2-201ENSMUST00000222158 171 ntBASIC3.34□□□□□ -1.87
Prpf18Q8BM39 Gm3829-201ENSMUST00000222362 619 ntBASIC3.34□□□□□ -1.87
Prpf18Q8BM39 Gm25258-201ENSMUST00000083049 107 ntBASIC3.34□□□□□ -1.87
Prpf18Q8BM39 Mir133a-1-201ENSMUST00000083465 68 ntBASIC3.34□□□□□ -1.87
Prpf18Q8BM39 Mir32-201ENSMUST00000083610 70 ntBASIC3.34□□□□□ -1.87
Prpf18Q8BM39 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Prpf18Q8BM39 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
Prpf18Q8BM39 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.88
Prpf18Q8BM39 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
Prpf18Q8BM39 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.88
Prpf18Q8BM39 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.34□□□□□ -1.88
Prpf18Q8BM39 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
Prpf18Q8BM39 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Prpf18Q8BM39 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
Prpf18Q8BM39 Mir466b-8-201ENSMUST00000103883 86 ntBASIC3.33□□□□□ -1.88
Prpf18Q8BM39 Mir875-201ENSMUST00000104698 78 ntBASIC3.33□□□□□ -1.88
Prpf18Q8BM39 Gm12793-201ENSMUST00000119268 292 ntBASIC3.33□□□□□ -1.88
Prpf18Q8BM39 Gm12443-201ENSMUST00000122308 323 ntBASIC3.33□□□□□ -1.88
Prpf18Q8BM39 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Prpf18Q8BM39 Gm27723-201ENSMUST00000157398 63 ntBASIC3.33□□□□□ -1.88
Prpf18Q8BM39 Gm24716-201ENSMUST00000157524 104 ntBASIC3.33□□□□□ -1.88
Prpf18Q8BM39 Gm23474-201ENSMUST00000158884 75 ntBASIC3.33□□□□□ -1.88
Prpf18Q8BM39 Gm25450-201ENSMUST00000179144 107 ntBASIC3.33□□□□□ -1.88
Prpf18Q8BM39 Mir6402-201ENSMUST00000183406 80 ntBASIC3.33□□□□□ -1.88
Prpf18Q8BM39 Gm37791-201ENSMUST00000195081 286 ntBASIC3.33□□□□□ -1.88
Prpf18Q8BM39 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC3.33□□□□□ -1.88
Prpf18Q8BM39 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC3.33□□□□□ -1.88
Prpf18Q8BM39 Mir466e-201ENSMUST00000198862 84 ntBASIC3.33□□□□□ -1.88
Prpf18Q8BM39 Mir466c-1-201ENSMUST00000200654 84 ntBASIC3.33□□□□□ -1.88
Prpf18Q8BM39 Gm45687-201ENSMUST00000209454 155 ntBASIC3.33□□□□□ -1.88
Prpf18Q8BM39 AC155923.1-201ENSMUST00000215676 356 ntBASIC3.33□□□□□ -1.88
Prpf18Q8BM39 CT030182.3-201ENSMUST00000225986 582 ntBASIC3.33□□□□□ -1.88
Prpf18Q8BM39 AC156790.5-201ENSMUST00000227075 231 ntBASIC3.33□□□□□ -1.88
Prpf18Q8BM39 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
Prpf18Q8BM39 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Prpf18Q8BM39 Gm26497-201ENSMUST00000083146 107 ntBASIC3.33□□□□□ -1.88
Prpf18Q8BM39 Mir346-201ENSMUST00000083547 98 ntBASIC3.33□□□□□ -1.88
Prpf18Q8BM39 Gm23731-201ENSMUST00000083749 107 ntBASIC3.33□□□□□ -1.88
Prpf18Q8BM39 Snord15a-201ENSMUST00000083888 148 ntBASIC3.33□□□□□ -1.88
Prpf18Q8BM39 Gm24522-201ENSMUST00000083964 108 ntBASIC3.33□□□□□ -1.88
Prpf18Q8BM39 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Prpf18Q8BM39 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.33□□□□□ -1.88
Prpf18Q8BM39 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
Prpf18Q8BM39 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
Prpf18Q8BM39 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 126.9 ms