Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Gm26127-201ENSMUST00000083193 107 ntBASIC2.31□□□□□ -2.04
Upk3bQ80YF6 Gm24456-201ENSMUST00000083198 107 ntBASIC2.31□□□□□ -2.04
Upk3bQ80YF6 Gm24458-201ENSMUST00000083204 107 ntBASIC2.31□□□□□ -2.04
Upk3bQ80YF6 Gm24018-201ENSMUST00000083232 107 ntBASIC2.31□□□□□ -2.04
Upk3bQ80YF6 Gm25794-201ENSMUST00000083286 107 ntBASIC2.31□□□□□ -2.04
Upk3bQ80YF6 Gm25790-201ENSMUST00000083293 107 ntBASIC2.31□□□□□ -2.04
Upk3bQ80YF6 Gm22295-201ENSMUST00000083311 107 ntBASIC2.31□□□□□ -2.04
Upk3bQ80YF6 Gm23454-201ENSMUST00000083332 133 ntBASIC2.31□□□□□ -2.04
Upk3bQ80YF6 Gm25127-201ENSMUST00000083336 107 ntBASIC2.31□□□□□ -2.04
Upk3bQ80YF6 Gm25583-201ENSMUST00000083413 107 ntBASIC2.31□□□□□ -2.04
Upk3bQ80YF6 Gm25577-201ENSMUST00000083414 107 ntBASIC2.31□□□□□ -2.04
Upk3bQ80YF6 Gm24414-201ENSMUST00000083434 107 ntBASIC2.31□□□□□ -2.04
Upk3bQ80YF6 Gm24861-201ENSMUST00000083459 107 ntBASIC2.31□□□□□ -2.04
Upk3bQ80YF6 Mir10a-201ENSMUST00000083585 110 ntBASIC2.31□□□□□ -2.04
Upk3bQ80YF6 Gm24803-201ENSMUST00000083693 107 ntBASIC2.31□□□□□ -2.04
Upk3bQ80YF6 Gm23103-201ENSMUST00000083725 107 ntBASIC2.31□□□□□ -2.04
Upk3bQ80YF6 Gm22580-201ENSMUST00000083727 107 ntBASIC2.31□□□□□ -2.04
Upk3bQ80YF6 Gm24260-201ENSMUST00000083741 107 ntBASIC2.31□□□□□ -2.04
Upk3bQ80YF6 Gm23732-201ENSMUST00000083751 107 ntBASIC2.31□□□□□ -2.04
Upk3bQ80YF6 Gm22682-201ENSMUST00000083854 107 ntBASIC2.31□□□□□ -2.04
Upk3bQ80YF6 Gm25869-201ENSMUST00000083855 107 ntBASIC2.31□□□□□ -2.04
Upk3bQ80YF6 Gm24693-201ENSMUST00000083885 107 ntBASIC2.31□□□□□ -2.04
Upk3bQ80YF6 Gm26317-201ENSMUST00000083894 107 ntBASIC2.31□□□□□ -2.04
Upk3bQ80YF6 Gm22352-201ENSMUST00000083917 107 ntBASIC2.31□□□□□ -2.04
Upk3bQ80YF6 Gm24448-201ENSMUST00000083979 107 ntBASIC2.31□□□□□ -2.04
Upk3bQ80YF6 Gm22798-201ENSMUST00000083992 107 ntBASIC2.31□□□□□ -2.04
Upk3bQ80YF6 Gm26427-201ENSMUST00000093648 107 ntBASIC2.31□□□□□ -2.04
Upk3bQ80YF6 Gm22886-201ENSMUST00000093714 107 ntBASIC2.31□□□□□ -2.04
Upk3bQ80YF6 Gm22170-201ENSMUST00000097247 107 ntBASIC2.31□□□□□ -2.04
Upk3bQ80YF6 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Upk3bQ80YF6 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Upk3bQ80YF6 Gm38706-201ENSMUST00000182397 2617 ntBASIC2.3□□□□□ -2.04
Upk3bQ80YF6 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Upk3bQ80YF6 Gm22939-201ENSMUST00000103958 131 ntBASIC2.3□□□□□ -2.04
Upk3bQ80YF6 Gm9059-201ENSMUST00000118319 183 ntBASIC2.3□□□□□ -2.04
Upk3bQ80YF6 Gm13903-201ENSMUST00000120945 193 ntBASIC2.3□□□□□ -2.04
Upk3bQ80YF6 Gm14761-201ENSMUST00000121363 262 ntBASIC2.3□□□□□ -2.04
Upk3bQ80YF6 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC2.3□□□□□ -2.04
Upk3bQ80YF6 Gm23599-201ENSMUST00000157261 251 ntBASIC2.3□□□□□ -2.04
Upk3bQ80YF6 Gm22038-201ENSMUST00000157277 242 ntBASIC2.3□□□□□ -2.04
Upk3bQ80YF6 Gm22216-201ENSMUST00000157557 114 ntBASIC2.3□□□□□ -2.04
Upk3bQ80YF6 Gm17065-201ENSMUST00000165245 239 ntBASIC2.3□□□□□ -2.04
Upk3bQ80YF6 Gm17072-201ENSMUST00000166673 658 ntBASIC2.3□□□□□ -2.04
Upk3bQ80YF6 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Upk3bQ80YF6 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC2.3□□□□□ -2.04
Upk3bQ80YF6 Gm28755-201ENSMUST00000185773 199 ntBASIC2.3□□□□□ -2.04
Upk3bQ80YF6 Gm28650-201ENSMUST00000188413 411 ntBASIC2.3□□□□□ -2.04
Upk3bQ80YF6 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC2.3□□□□□ -2.04
Upk3bQ80YF6 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC2.3□□□□□ -2.04
Upk3bQ80YF6 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC2.3□□□□□ -2.04
Upk3bQ80YF6 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC2.3□□□□□ -2.04
Upk3bQ80YF6 Trav15n-3-201ENSMUST00000200498 168 ntBASIC2.3□□□□□ -2.04
Upk3bQ80YF6 Gm44060-201ENSMUST00000204440 410 ntBASIC2.3□□□□□ -2.04
Upk3bQ80YF6 Gm44903-201ENSMUST00000206840 130 ntBASIC2.3□□□□□ -2.04
Upk3bQ80YF6 Mir103-2-201ENSMUST00000083629 86 ntBASIC2.3□□□□□ -2.04
Upk3bQ80YF6 Gm24764-201ENSMUST00000083686 199 ntBASIC2.3□□□□□ -2.04
Upk3bQ80YF6 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Upk3bQ80YF6 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC2.3□□□□□ -2.04
Upk3bQ80YF6 Gm17969-201ENSMUST00000185706 2557 ntBASIC2.3□□□□□ -2.04
Upk3bQ80YF6 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC2.29□□□□□ -2.04
Upk3bQ80YF6 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Upk3bQ80YF6 Gm42659-201ENSMUST00000196955 1754 ntBASIC2.29□□□□□ -2.04
Upk3bQ80YF6 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
Upk3bQ80YF6 Gm25526-201ENSMUST00000104332 132 ntBASIC2.29□□□□□ -2.04
Upk3bQ80YF6 Gm14852-201ENSMUST00000120065 647 ntBASIC2.29□□□□□ -2.04
Upk3bQ80YF6 Gm14287-201ENSMUST00000121060 117 ntBASIC2.29□□□□□ -2.04
Upk3bQ80YF6 Gm22073-201ENSMUST00000122668 189 ntBASIC2.29□□□□□ -2.04
Upk3bQ80YF6 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
Upk3bQ80YF6 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC2.29□□□□□ -2.04
Upk3bQ80YF6 Gm26414-201ENSMUST00000157674 269 ntBASIC2.29□□□□□ -2.04
Upk3bQ80YF6 Gm22843-201ENSMUST00000157710 134 ntBASIC2.29□□□□□ -2.04
Upk3bQ80YF6 Gm24997-201ENSMUST00000157910 105 ntBASIC2.29□□□□□ -2.04
Upk3bQ80YF6 Gm24847-201ENSMUST00000158032 108 ntBASIC2.29□□□□□ -2.04
Upk3bQ80YF6 Gm27510-201ENSMUST00000158214 64 ntBASIC2.29□□□□□ -2.04
Upk3bQ80YF6 Gm22891-201ENSMUST00000158641 164 ntBASIC2.29□□□□□ -2.04
Upk3bQ80YF6 Gm25486-201ENSMUST00000158726 63 ntBASIC2.29□□□□□ -2.04
Upk3bQ80YF6 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC2.29□□□□□ -2.04
Upk3bQ80YF6 Gm24082-201ENSMUST00000175175 83 ntBASIC2.29□□□□□ -2.04
Upk3bQ80YF6 Mir6338-201ENSMUST00000183389 109 ntBASIC2.29□□□□□ -2.04
Upk3bQ80YF6 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC2.29□□□□□ -2.04
Upk3bQ80YF6 Gm18551-201ENSMUST00000195594 642 ntBASIC2.29□□□□□ -2.04
Upk3bQ80YF6 Gm44399-201ENSMUST00000205043 226 ntBASIC2.29□□□□□ -2.04
Upk3bQ80YF6 Gm44824-201ENSMUST00000207021 229 ntBASIC2.29□□□□□ -2.04
Upk3bQ80YF6 Gm6030-201ENSMUST00000078768 402 ntBASIC2.29□□□□□ -2.04
Upk3bQ80YF6 Snord42a-201ENSMUST00000082606 65 ntBASIC2.29□□□□□ -2.04
Upk3bQ80YF6 Gm23042-201ENSMUST00000083866 101 ntBASIC2.29□□□□□ -2.04
Upk3bQ80YF6 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC2.29□□□□□ -2.04
Upk3bQ80YF6 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Upk3bQ80YF6 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
Upk3bQ80YF6 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Upk3bQ80YF6 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Upk3bQ80YF6 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
Upk3bQ80YF6 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
Upk3bQ80YF6 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC2.28□□□□□ -2.04
Upk3bQ80YF6 Gm25764-201ENSMUST00000104092 134 ntBASIC2.28□□□□□ -2.04
Upk3bQ80YF6 Snord70-201ENSMUST00000104157 87 ntBASIC2.28□□□□□ -2.04
Upk3bQ80YF6 Gm22658-201ENSMUST00000104196 155 ntBASIC2.28□□□□□ -2.04
Upk3bQ80YF6 Gm22590-201ENSMUST00000104247 128 ntBASIC2.28□□□□□ -2.04
Upk3bQ80YF6 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
Upk3bQ80YF6 Gm25111-201ENSMUST00000116686 147 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 579.7 ms