Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Trim56Q80VI1 AC107864.1-201ENSMUST00000217937 496 ntBASIC4.21□□□□□ -1.74
Trim56Q80VI1 Gm22294-201ENSMUST00000083308 104 ntBASIC4.21□□□□□ -1.74
Trim56Q80VI1 Gm25630-201ENSMUST00000084000 162 ntBASIC4.21□□□□□ -1.74
Trim56Q80VI1 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Trim56Q80VI1 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
Trim56Q80VI1 Gm44525-201ENSMUST00000183129 2634 ntBASIC4.2□□□□□ -1.74
Trim56Q80VI1 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Trim56Q80VI1 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Trim56Q80VI1 Gm12982-201ENSMUST00000117408 190 ntBASIC4.2□□□□□ -1.74
Trim56Q80VI1 Gm12722-201ENSMUST00000118507 493 ntBASIC4.2□□□□□ -1.74
Trim56Q80VI1 Gm5762-201ENSMUST00000119204 258 ntBASIC4.2□□□□□ -1.74
Trim56Q80VI1 Mup-ps20-201ENSMUST00000121132 389 ntBASIC4.2□□□□□ -1.74
Trim56Q80VI1 Gm26279-201ENSMUST00000157095 102 ntBASIC4.2□□□□□ -1.74
Trim56Q80VI1 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
Trim56Q80VI1 Gm23002-201ENSMUST00000179221 107 ntBASIC4.2□□□□□ -1.74
Trim56Q80VI1 Gm27465-201ENSMUST00000184290 91 ntBASIC4.2□□□□□ -1.74
Trim56Q80VI1 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Trim56Q80VI1 Gm1833-201ENSMUST00000191608 682 ntBASIC4.2□□□□□ -1.74
Trim56Q80VI1 Gm36964-201ENSMUST00000191876 198 ntBASIC4.2□□□□□ -1.74
Trim56Q80VI1 Igkv13-76-201ENSMUST00000197621 347 ntBASIC4.2□□□□□ -1.74
Trim56Q80VI1 AC129017.1-201ENSMUST00000228363 270 ntBASIC4.2□□□□□ -1.74
Trim56Q80VI1 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Trim56Q80VI1 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
Trim56Q80VI1 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Trim56Q80VI1 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Trim56Q80VI1 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Trim56Q80VI1 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Trim56Q80VI1 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Trim56Q80VI1 AC159193.2-201ENSMUST00000220865 4251 ntBASIC4.19□□□□□ -1.74
Trim56Q80VI1 Gm38207-201ENSMUST00000193009 3505 ntBASIC4.19□□□□□ -1.74
Trim56Q80VI1 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Trim56Q80VI1 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Trim56Q80VI1 Gm11065-201ENSMUST00000111462 228 ntBASIC4.19□□□□□ -1.74
Trim56Q80VI1 Gm14894-201ENSMUST00000117170 270 ntBASIC4.19□□□□□ -1.74
Trim56Q80VI1 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC4.19□□□□□ -1.74
Trim56Q80VI1 Gm13210-201ENSMUST00000121483 273 ntBASIC4.19□□□□□ -1.74
Trim56Q80VI1 Gm15065-201ENSMUST00000121699 273 ntBASIC4.19□□□□□ -1.74
Trim56Q80VI1 Gm14629-201ENSMUST00000122428 144 ntBASIC4.19□□□□□ -1.74
Trim56Q80VI1 Gm8840-201ENSMUST00000122454 386 ntBASIC4.19□□□□□ -1.74
Trim56Q80VI1 Gm22988-201ENSMUST00000122759 144 ntBASIC4.19□□□□□ -1.74
Trim56Q80VI1 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC4.19□□□□□ -1.74
Trim56Q80VI1 Gm25720-201ENSMUST00000157503 105 ntBASIC4.19□□□□□ -1.74
Trim56Q80VI1 Gm22315-201ENSMUST00000158010 143 ntBASIC4.19□□□□□ -1.74
Trim56Q80VI1 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC4.19□□□□□ -1.74
Trim56Q80VI1 Gm24308-201ENSMUST00000177773 114 ntBASIC4.19□□□□□ -1.74
Trim56Q80VI1 Gm27476-201ENSMUST00000183366 104 ntBASIC4.19□□□□□ -1.74
Trim56Q80VI1 Mir7047-201ENSMUST00000184595 64 ntBASIC4.19□□□□□ -1.74
Trim56Q80VI1 Gm37449-201ENSMUST00000193016 270 ntBASIC4.19□□□□□ -1.74
Trim56Q80VI1 Gm18658-201ENSMUST00000195558 270 ntBASIC4.19□□□□□ -1.74
Trim56Q80VI1 AC160865.1-201ENSMUST00000219873 151 ntBASIC4.19□□□□□ -1.74
Trim56Q80VI1 AC115735.2-201ENSMUST00000227135 351 ntBASIC4.19□□□□□ -1.74
Trim56Q80VI1 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Trim56Q80VI1 Gm23731-201ENSMUST00000083749 107 ntBASIC4.19□□□□□ -1.74
Trim56Q80VI1 Gm26166-201ENSMUST00000083788 107 ntBASIC4.19□□□□□ -1.74
Trim56Q80VI1 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Trim56Q80VI1 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
Trim56Q80VI1 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Trim56Q80VI1 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Trim56Q80VI1 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
Trim56Q80VI1 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Trim56Q80VI1 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Trim56Q80VI1 Gm45809-201ENSMUST00000211661 3894 ntBASIC4.18□□□□□ -1.74
Trim56Q80VI1 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Trim56Q80VI1 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
Trim56Q80VI1 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
Trim56Q80VI1 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Trim56Q80VI1 Gm22779-201ENSMUST00000104085 107 ntBASIC4.18□□□□□ -1.74
Trim56Q80VI1 Gm24008-201ENSMUST00000157733 138 ntBASIC4.18□□□□□ -1.74
Trim56Q80VI1 Gm23640-201ENSMUST00000157860 104 ntBASIC4.18□□□□□ -1.74
Trim56Q80VI1 Gm26171-201ENSMUST00000158422 131 ntBASIC4.18□□□□□ -1.74
Trim56Q80VI1 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Trim56Q80VI1 Gm22450-201ENSMUST00000179641 107 ntBASIC4.18□□□□□ -1.74
Trim56Q80VI1 Gm25473-201ENSMUST00000180191 107 ntBASIC4.18□□□□□ -1.74
Trim56Q80VI1 Mir6715-201ENSMUST00000184990 57 ntBASIC4.18□□□□□ -1.74
Trim56Q80VI1 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC4.18□□□□□ -1.74
Trim56Q80VI1 Gm6842-201ENSMUST00000211361 390 ntBASIC4.18□□□□□ -1.74
Trim56Q80VI1 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC4.18□□□□□ -1.74
Trim56Q80VI1 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC4.18□□□□□ -1.74
Trim56Q80VI1 AC138401.2-201ENSMUST00000220461 365 ntBASIC4.18□□□□□ -1.74
Trim56Q80VI1 Gm7065-201ENSMUST00000222150 474 ntBASIC4.18□□□□□ -1.74
Trim56Q80VI1 AC154358.1-201ENSMUST00000224871 218 ntBASIC4.18□□□□□ -1.74
Trim56Q80VI1 AC123533.1-201ENSMUST00000227782 446 ntBASIC4.18□□□□□ -1.74
Trim56Q80VI1 Gm26071-201ENSMUST00000083261 107 ntBASIC4.18□□□□□ -1.74
Trim56Q80VI1 Gm24521-201ENSMUST00000083958 107 ntBASIC4.18□□□□□ -1.74
Trim56Q80VI1 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Trim56Q80VI1 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC4.18□□□□□ -1.74
Trim56Q80VI1 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Trim56Q80VI1 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Trim56Q80VI1 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Trim56Q80VI1 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC4.17□□□□□ -1.74
Trim56Q80VI1 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Trim56Q80VI1 AC124561.2-201ENSMUST00000226657 1973 ntBASIC4.17□□□□□ -1.74
Trim56Q80VI1 Gm12902-201ENSMUST00000118389 322 ntBASIC4.17□□□□□ -1.74
Trim56Q80VI1 Gm16032-201ENSMUST00000118534 168 ntBASIC4.17□□□□□ -1.74
Trim56Q80VI1 Gm13868-201ENSMUST00000122411 294 ntBASIC4.17□□□□□ -1.74
Trim56Q80VI1 Gm26412-201ENSMUST00000157666 55 ntBASIC4.17□□□□□ -1.74
Trim56Q80VI1 Gm23775-201ENSMUST00000158991 249 ntBASIC4.17□□□□□ -1.74
Trim56Q80VI1 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Trim56Q80VI1 Gm24086-201ENSMUST00000175171 98 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms