Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC3.6□□□□□ -1.83
Pif1Q80SX8 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Pif1Q80SX8 Gm24318-201ENSMUST00000104490 131 ntBASIC3.6□□□□□ -1.83
Pif1Q80SX8 Gm12550-201ENSMUST00000118478 329 ntBASIC3.6□□□□□ -1.83
Pif1Q80SX8 Gm13852-201ENSMUST00000122350 242 ntBASIC3.6□□□□□ -1.83
Pif1Q80SX8 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC3.6□□□□□ -1.83
Pif1Q80SX8 Gm23865-201ENSMUST00000157723 97 ntBASIC3.6□□□□□ -1.83
Pif1Q80SX8 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC3.6□□□□□ -1.83
Pif1Q80SX8 Mir6938-201ENSMUST00000184173 63 ntBASIC3.6□□□□□ -1.83
Pif1Q80SX8 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC3.6□□□□□ -1.83
Pif1Q80SX8 Mir7661-201ENSMUST00000197023 61 ntBASIC3.6□□□□□ -1.83
Pif1Q80SX8 Gm44409-201ENSMUST00000198810 166 ntBASIC3.6□□□□□ -1.83
Pif1Q80SX8 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC3.6□□□□□ -1.83
Pif1Q80SX8 Gm45616-201ENSMUST00000211711 319 ntBASIC3.6□□□□□ -1.83
Pif1Q80SX8 AC188459.1-201ENSMUST00000216651 300 ntBASIC3.6□□□□□ -1.83
Pif1Q80SX8 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Pif1Q80SX8 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Pif1Q80SX8 Gm23736-201ENSMUST00000082553 75 ntBASIC3.6□□□□□ -1.83
Pif1Q80SX8 Mir32-201ENSMUST00000083610 70 ntBASIC3.6□□□□□ -1.83
Pif1Q80SX8 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Pif1Q80SX8 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Pif1Q80SX8 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
Pif1Q80SX8 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Pif1Q80SX8 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Pif1Q80SX8 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC3.6□□□□□ -1.83
Pif1Q80SX8 Gm42639-201ENSMUST00000197061 1871 ntBASIC3.6□□□□□ -1.83
Pif1Q80SX8 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
Pif1Q80SX8 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Pif1Q80SX8 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Pif1Q80SX8 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC3.59□□□□□ -1.83
Pif1Q80SX8 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
Pif1Q80SX8 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Pif1Q80SX8 Gm37566-201ENSMUST00000192363 4355 ntBASIC3.59□□□□□ -1.83
Pif1Q80SX8 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Pif1Q80SX8 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Pif1Q80SX8 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Pif1Q80SX8 Gm24067-201ENSMUST00000104514 85 ntBASIC3.59□□□□□ -1.83
Pif1Q80SX8 Gm13378-201ENSMUST00000117483 336 ntBASIC3.59□□□□□ -1.83
Pif1Q80SX8 Gm14001-201ENSMUST00000118847 247 ntBASIC3.59□□□□□ -1.83
Pif1Q80SX8 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC3.59□□□□□ -1.83
Pif1Q80SX8 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Pif1Q80SX8 Gm22814-201ENSMUST00000157452 104 ntBASIC3.59□□□□□ -1.83
Pif1Q80SX8 Gm23540-201ENSMUST00000157543 164 ntBASIC3.59□□□□□ -1.83
Pif1Q80SX8 Gm24314-201ENSMUST00000158274 123 ntBASIC3.59□□□□□ -1.83
Pif1Q80SX8 Gm6374-201ENSMUST00000159051 788 ntBASIC3.59□□□□□ -1.83
Pif1Q80SX8 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Pif1Q80SX8 Gm20660-201ENSMUST00000177515 289 ntBASIC3.59□□□□□ -1.83
Pif1Q80SX8 Gm28849-201ENSMUST00000188127 174 ntBASIC3.59□□□□□ -1.83
Pif1Q80SX8 Gm28330-201ENSMUST00000190353 171 ntBASIC3.59□□□□□ -1.83
Pif1Q80SX8 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC3.59□□□□□ -1.83
Pif1Q80SX8 Mir3535-201ENSMUST00000197651 147 ntBASIC3.59□□□□□ -1.83
Pif1Q80SX8 Mir3970-201ENSMUST00000199287 90 ntBASIC3.59□□□□□ -1.83
Pif1Q80SX8 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC3.59□□□□□ -1.83
Pif1Q80SX8 AC138401.2-201ENSMUST00000220461 365 ntBASIC3.59□□□□□ -1.83
Pif1Q80SX8 AC162934.1-201ENSMUST00000222880 309 ntBASIC3.59□□□□□ -1.83
Pif1Q80SX8 Gm23925-201ENSMUST00000082471 132 ntBASIC3.59□□□□□ -1.83
Pif1Q80SX8 Mir26a-1-201ENSMUST00000083579 90 ntBASIC3.59□□□□□ -1.83
Pif1Q80SX8 Gm23731-201ENSMUST00000083749 107 ntBASIC3.59□□□□□ -1.83
Pif1Q80SX8 Gm42768-201ENSMUST00000197734 2897 ntBASIC3.59□□□□□ -1.84
Pif1Q80SX8 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Pif1Q80SX8 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Pif1Q80SX8 AC160115.1-201ENSMUST00000224678 1574 ntBASIC3.59□□□□□ -1.84
Pif1Q80SX8 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Pif1Q80SX8 AC153526.2-201ENSMUST00000218206 2031 ntBASIC3.58□□□□□ -1.84
Pif1Q80SX8 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Pif1Q80SX8 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.58□□□□□ -1.84
Pif1Q80SX8 Mir872-201ENSMUST00000104728 81 ntBASIC3.58□□□□□ -1.84
Pif1Q80SX8 Gm11566-201ENSMUST00000118550 203 ntBASIC3.58□□□□□ -1.84
Pif1Q80SX8 Gm13967-201ENSMUST00000120404 380 ntBASIC3.58□□□□□ -1.84
Pif1Q80SX8 Gm11904-201ENSMUST00000120562 248 ntBASIC3.58□□□□□ -1.84
Pif1Q80SX8 Mup-ps20-201ENSMUST00000121132 389 ntBASIC3.58□□□□□ -1.84
Pif1Q80SX8 Gm5396-201ENSMUST00000121222 532 ntBASIC3.58□□□□□ -1.84
Pif1Q80SX8 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC3.58□□□□□ -1.84
Pif1Q80SX8 Gm24308-201ENSMUST00000177773 114 ntBASIC3.58□□□□□ -1.84
Pif1Q80SX8 Gm27392-201ENSMUST00000185041 101 ntBASIC3.58□□□□□ -1.84
Pif1Q80SX8 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Pif1Q80SX8 Gm43193-201ENSMUST00000197732 441 ntBASIC3.58□□□□□ -1.84
Pif1Q80SX8 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC3.58□□□□□ -1.84
Pif1Q80SX8 Gm23518-201ENSMUST00000082835 153 ntBASIC3.58□□□□□ -1.84
Pif1Q80SX8 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Pif1Q80SX8 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Pif1Q80SX8 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC3.58□□□□□ -1.84
Pif1Q80SX8 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Pif1Q80SX8 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
Pif1Q80SX8 Gm15213-201ENSMUST00000122098 216 ntBASIC3.57□□□□□ -1.84
Pif1Q80SX8 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Pif1Q80SX8 Gm25977-201ENSMUST00000158697 85 ntBASIC3.57□□□□□ -1.84
Pif1Q80SX8 Gm22531-201ENSMUST00000158819 140 ntBASIC3.57□□□□□ -1.84
Pif1Q80SX8 Gm2862-201ENSMUST00000161524 328 ntBASIC3.57□□□□□ -1.84
Pif1Q80SX8 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC3.57□□□□□ -1.84
Pif1Q80SX8 Gm27189-201ENSMUST00000184119 190 ntBASIC3.57□□□□□ -1.84
Pif1Q80SX8 Gm37343-201ENSMUST00000192542 111 ntBASIC3.57□□□□□ -1.84
Pif1Q80SX8 Gm37672-201ENSMUST00000192682 4014 ntBASIC3.57□□□□□ -1.84
Pif1Q80SX8 Gm37097-201ENSMUST00000193676 336 ntBASIC3.57□□□□□ -1.84
Pif1Q80SX8 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC3.57□□□□□ -1.84
Pif1Q80SX8 Gm42578-201ENSMUST00000199960 194 ntBASIC3.57□□□□□ -1.84
Pif1Q80SX8 Gm43600-201ENSMUST00000202134 223 ntBASIC3.57□□□□□ -1.84
Pif1Q80SX8 Gm43978-201ENSMUST00000203491 451 ntBASIC3.57□□□□□ -1.84
Pif1Q80SX8 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Pif1Q80SX8 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 152.7 ms