Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm45002-201ENSMUST00000208045 120 ntBASIC3.9□□□□□ -1.79
Trim28Q62318 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC3.9□□□□□ -1.79
Trim28Q62318 AC167721.1-201ENSMUST00000217088 279 ntBASIC3.9□□□□□ -1.79
Trim28Q62318 AC123860.1-201ENSMUST00000228033 481 ntBASIC3.9□□□□□ -1.79
Trim28Q62318 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Trim28Q62318 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
Trim28Q62318 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
Trim28Q62318 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
Trim28Q62318 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Trim28Q62318 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Trim28Q62318 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Trim28Q62318 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
Trim28Q62318 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
Trim28Q62318 Gm14429-201ENSMUST00000121881 2024 ntBASIC3.89□□□□□ -1.79
Trim28Q62318 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Trim28Q62318 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Trim28Q62318 Gm14298-201ENSMUST00000139032 237 ntBASIC3.89□□□□□ -1.79
Trim28Q62318 Gm16356-201ENSMUST00000143300 169 ntBASIC3.89□□□□□ -1.79
Trim28Q62318 Gm24501-201ENSMUST00000158452 62 ntBASIC3.89□□□□□ -1.79
Trim28Q62318 Gm25486-201ENSMUST00000158726 63 ntBASIC3.89□□□□□ -1.79
Trim28Q62318 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Trim28Q62318 Gm28534-201ENSMUST00000187744 676 ntBASIC3.89□□□□□ -1.79
Trim28Q62318 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Trim28Q62318 Gm43521-201ENSMUST00000197838 255 ntBASIC3.89□□□□□ -1.79
Trim28Q62318 Gm43107-201ENSMUST00000198729 255 ntBASIC3.89□□□□□ -1.79
Trim28Q62318 Gm22249-201ENSMUST00000082485 136 ntBASIC3.89□□□□□ -1.79
Trim28Q62318 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Trim28Q62318 Gm43663-201ENSMUST00000198643 1505 ntBASIC3.89□□□□□ -1.79
Trim28Q62318 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Trim28Q62318 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
Trim28Q62318 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Trim28Q62318 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Trim28Q62318 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
Trim28Q62318 Gm42770-201ENSMUST00000199657 4155 ntBASIC3.88□□□□□ -1.79
Trim28Q62318 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Trim28Q62318 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Trim28Q62318 Gm37642-201ENSMUST00000193166 1735 ntBASIC3.88□□□□□ -1.79
Trim28Q62318 Gm23142-201ENSMUST00000101848 105 ntBASIC3.88□□□□□ -1.79
Trim28Q62318 Gm26240-201ENSMUST00000101893 105 ntBASIC3.88□□□□□ -1.79
Trim28Q62318 Gm12156-201ENSMUST00000119188 554 ntBASIC3.88□□□□□ -1.79
Trim28Q62318 Gm13396-201ENSMUST00000120617 271 ntBASIC3.88□□□□□ -1.79
Trim28Q62318 Gm23463-201ENSMUST00000122468 99 ntBASIC3.88□□□□□ -1.79
Trim28Q62318 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC3.88□□□□□ -1.79
Trim28Q62318 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Trim28Q62318 Gm22814-201ENSMUST00000157452 104 ntBASIC3.88□□□□□ -1.79
Trim28Q62318 Gm27997-201ENSMUST00000184942 69 ntBASIC3.88□□□□□ -1.79
Trim28Q62318 Gm28921-201ENSMUST00000190219 378 ntBASIC3.88□□□□□ -1.79
Trim28Q62318 Gm28155-201ENSMUST00000191066 151 ntBASIC3.88□□□□□ -1.79
Trim28Q62318 Igkv13-76-201ENSMUST00000197621 347 ntBASIC3.88□□□□□ -1.79
Trim28Q62318 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC3.88□□□□□ -1.79
Trim28Q62318 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Trim28Q62318 AC158622.1-201ENSMUST00000217107 230 ntBASIC3.88□□□□□ -1.79
Trim28Q62318 CT485612.4-201ENSMUST00000223405 250 ntBASIC3.88□□□□□ -1.79
Trim28Q62318 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Trim28Q62318 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Trim28Q62318 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Trim28Q62318 Gm45038-201ENSMUST00000207537 3838 ntBASIC3.87□□□□□ -1.79
Trim28Q62318 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
Trim28Q62318 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC3.87□□□□□ -1.79
Trim28Q62318 Mir599-201ENSMUST00000102378 88 ntBASIC3.87□□□□□ -1.79
Trim28Q62318 n-R5s67-201ENSMUST00000104336 114 ntBASIC3.87□□□□□ -1.79
Trim28Q62318 Gm23705-201ENSMUST00000104370 130 ntBASIC3.87□□□□□ -1.79
Trim28Q62318 n-R5s202-201ENSMUST00000104517 114 ntBASIC3.87□□□□□ -1.79
Trim28Q62318 Gm11935-201ENSMUST00000118608 399 ntBASIC3.87□□□□□ -1.79
Trim28Q62318 Gm12647-201ENSMUST00000118977 265 ntBASIC3.87□□□□□ -1.79
Trim28Q62318 Gm11693-201ENSMUST00000119625 565 ntBASIC3.87□□□□□ -1.79
Trim28Q62318 Gm15244-201ENSMUST00000121122 130 ntBASIC3.87□□□□□ -1.79
Trim28Q62318 Gm22337-201ENSMUST00000157721 132 ntBASIC3.87□□□□□ -1.79
Trim28Q62318 Gm26215-201ENSMUST00000158584 139 ntBASIC3.87□□□□□ -1.79
Trim28Q62318 Gm23209-201ENSMUST00000158667 110 ntBASIC3.87□□□□□ -1.79
Trim28Q62318 Gm28282-201ENSMUST00000186072 186 ntBASIC3.87□□□□□ -1.79
Trim28Q62318 Gm20257-202ENSMUST00000188643 130 ntBASIC3.87□□□□□ -1.79
Trim28Q62318 Gm29014-201ENSMUST00000191422 326 ntBASIC3.87□□□□□ -1.79
Trim28Q62318 Gm19620-201ENSMUST00000195972 434 ntBASIC3.87□□□□□ -1.79
Trim28Q62318 Igkv4-65-201ENSMUST00000196986 358 ntBASIC3.87□□□□□ -1.79
Trim28Q62318 Gm42526-201ENSMUST00000198956 393 ntBASIC3.87□□□□□ -1.79
Trim28Q62318 Mir691-201ENSMUST00000199719 78 ntBASIC3.87□□□□□ -1.79
Trim28Q62318 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC3.87□□□□□ -1.79
Trim28Q62318 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC3.87□□□□□ -1.79
Trim28Q62318 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Trim28Q62318 Gm22358-201ENSMUST00000082877 122 ntBASIC3.87□□□□□ -1.79
Trim28Q62318 Gm25188-201ENSMUST00000083913 122 ntBASIC3.87□□□□□ -1.79
Trim28Q62318 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC3.87□□□□□ -1.79
Trim28Q62318 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Trim28Q62318 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
Trim28Q62318 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
Trim28Q62318 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Trim28Q62318 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
Trim28Q62318 Gm43404-201ENSMUST00000200424 2534 ntBASIC3.86□□□□□ -1.79
Trim28Q62318 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC3.86□□□□□ -1.79
Trim28Q62318 Gm17976-201ENSMUST00000184037 1909 ntBASIC3.86□□□□□ -1.79
Trim28Q62318 AC158805.1-201ENSMUST00000218197 2631 ntBASIC3.86□□□□□ -1.79
Trim28Q62318 Gm11384-201ENSMUST00000121376 303 ntBASIC3.86□□□□□ -1.79
Trim28Q62318 Gm24629-201ENSMUST00000122762 89 ntBASIC3.86□□□□□ -1.79
Trim28Q62318 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC3.86□□□□□ -1.79
Trim28Q62318 Gm25280-201ENSMUST00000157269 101 ntBASIC3.86□□□□□ -1.79
Trim28Q62318 Gm23325-201ENSMUST00000157422 129 ntBASIC3.86□□□□□ -1.79
Trim28Q62318 Gm17065-201ENSMUST00000165245 239 ntBASIC3.86□□□□□ -1.79
Trim28Q62318 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Trim28Q62318 Gm8114-201ENSMUST00000172225 484 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 105.2 ms