Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 Gm27898-201ENSMUST00000183987 80 ntBASIC2.02□□□□□ -2.09
Usf1Q61069 Mir8116-201ENSMUST00000184134 97 ntBASIC2.02□□□□□ -2.09
Usf1Q61069 Gm28627-201ENSMUST00000186141 453 ntBASIC2.02□□□□□ -2.09
Usf1Q61069 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC2.02□□□□□ -2.09
Usf1Q61069 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC2.02□□□□□ -2.09
Usf1Q61069 Ighv1-1-201ENSMUST00000194912 291 ntBASIC2.02□□□□□ -2.09
Usf1Q61069 Gm9236-201ENSMUST00000196892 587 ntBASIC2.02□□□□□ -2.09
Usf1Q61069 Gm17906-201ENSMUST00000202480 901 ntBASIC2.02□□□□□ -2.09
Usf1Q61069 Gm44083-201ENSMUST00000203114 337 ntBASIC2.02□□□□□ -2.09
Usf1Q61069 AC112274.2-201ENSMUST00000218436 170 ntBASIC2.02□□□□□ -2.09
Usf1Q61069 AC144733.1-201ENSMUST00000222893 1289 ntBASIC2.02□□□□□ -2.09
Usf1Q61069 AC156790.3-201ENSMUST00000226200 254 ntBASIC2.02□□□□□ -2.09
Usf1Q61069 AC117588.2-201ENSMUST00000228340 311 ntBASIC2.02□□□□□ -2.09
Usf1Q61069 AC139350.4-201ENSMUST00000228483 798 ntBASIC2.02□□□□□ -2.09
Usf1Q61069 Gm26228-201ENSMUST00000082512 107 ntBASIC2.02□□□□□ -2.09
Usf1Q61069 Gm25080-201ENSMUST00000082526 107 ntBASIC2.02□□□□□ -2.09
Usf1Q61069 Snord14d-201ENSMUST00000083424 86 ntBASIC2.02□□□□□ -2.09
Usf1Q61069 Mir410-201ENSMUST00000083563 81 ntBASIC2.02□□□□□ -2.09
Usf1Q61069 Gm22723-201ENSMUST00000083820 129 ntBASIC2.02□□□□□ -2.09
Usf1Q61069 Gm25518-201ENSMUST00000083864 107 ntBASIC2.02□□□□□ -2.09
Usf1Q61069 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Usf1Q61069 AC153967.1-201ENSMUST00000219333 3190 ntBASIC2.02□□□□□ -2.09
Usf1Q61069 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Usf1Q61069 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.02□□□□□ -2.09
Usf1Q61069 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
Usf1Q61069 Mir687-201ENSMUST00000102166 89 ntBASIC2.01□□□□□ -2.09
Usf1Q61069 Gm14887-201ENSMUST00000119522 663 ntBASIC2.01□□□□□ -2.09
Usf1Q61069 Gm14785-201ENSMUST00000120185 539 ntBASIC2.01□□□□□ -2.09
Usf1Q61069 Gm14362-201ENSMUST00000121679 273 ntBASIC2.01□□□□□ -2.09
Usf1Q61069 Gm14366-201ENSMUST00000121970 730 ntBASIC2.01□□□□□ -2.09
Usf1Q61069 Gm23429-201ENSMUST00000122486 149 ntBASIC2.01□□□□□ -2.09
Usf1Q61069 Gm15254-201ENSMUST00000149567 273 ntBASIC2.01□□□□□ -2.09
Usf1Q61069 Gm23752-201ENSMUST00000157584 115 ntBASIC2.01□□□□□ -2.09
Usf1Q61069 Mir669n-201ENSMUST00000158636 54 ntBASIC2.01□□□□□ -2.09
Usf1Q61069 Gm22527-201ENSMUST00000158816 106 ntBASIC2.01□□□□□ -2.09
Usf1Q61069 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC2.01□□□□□ -2.09
Usf1Q61069 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Usf1Q61069 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Usf1Q61069 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Usf1Q61069 Gm24168-201ENSMUST00000178825 107 ntBASIC2.01□□□□□ -2.09
Usf1Q61069 Gm23144-201ENSMUST00000180226 107 ntBASIC2.01□□□□□ -2.09
Usf1Q61069 Gm24518-201ENSMUST00000180275 94 ntBASIC2.01□□□□□ -2.09
Usf1Q61069 Gm9892-201ENSMUST00000182415 992 ntBASIC2.01□□□□□ -2.09
Usf1Q61069 Gm20915-201ENSMUST00000191575 663 ntBASIC2.01□□□□□ -2.09
Usf1Q61069 Gm42739-201ENSMUST00000200687 226 ntBASIC2.01□□□□□ -2.09
Usf1Q61069 Gm45445-201ENSMUST00000209586 232 ntBASIC2.01□□□□□ -2.09
Usf1Q61069 Gm45366-201ENSMUST00000209828 384 ntBASIC2.01□□□□□ -2.09
Usf1Q61069 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC2.01□□□□□ -2.09
Usf1Q61069 CT025689.4-201ENSMUST00000225926 601 ntBASIC2.01□□□□□ -2.09
Usf1Q61069 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.01□□□□□ -2.09
Usf1Q61069 Gm23454-201ENSMUST00000083332 133 ntBASIC2.01□□□□□ -2.09
Usf1Q61069 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Usf1Q61069 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Usf1Q61069 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2□□□□□ -2.09
Usf1Q61069 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC2□□□□□ -2.09
Usf1Q61069 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2□□□□□ -2.09
Usf1Q61069 Gm22831-201ENSMUST00000102473 109 ntBASIC2□□□□□ -2.09
Usf1Q61069 Gm23109-201ENSMUST00000116867 126 ntBASIC2□□□□□ -2.09
Usf1Q61069 Gm24907-201ENSMUST00000116932 128 ntBASIC2□□□□□ -2.09
Usf1Q61069 Gm14638-201ENSMUST00000121338 216 ntBASIC2□□□□□ -2.09
Usf1Q61069 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC2□□□□□ -2.09
Usf1Q61069 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC2□□□□□ -2.09
Usf1Q61069 Gm22793-201ENSMUST00000157227 330 ntBASIC2□□□□□ -2.09
Usf1Q61069 Gm22483-201ENSMUST00000157986 274 ntBASIC2□□□□□ -2.09
Usf1Q61069 Gm8532-201ENSMUST00000179174 461 ntBASIC2□□□□□ -2.09
Usf1Q61069 Gm9022-202ENSMUST00000183285 483 ntBASIC2□□□□□ -2.09
Usf1Q61069 Gm37771-201ENSMUST00000193121 265 ntBASIC2□□□□□ -2.09
Usf1Q61069 Trbv6-201ENSMUST00000193743 276 ntBASIC2□□□□□ -2.09
Usf1Q61069 Gm43427-201ENSMUST00000198188 331 ntBASIC2□□□□□ -2.09
Usf1Q61069 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC2□□□□□ -2.09
Usf1Q61069 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC2□□□□□ -2.09
Usf1Q61069 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC2□□□□□ -2.09
Usf1Q61069 Gm44181-201ENSMUST00000203106 483 ntBASIC2□□□□□ -2.09
Usf1Q61069 Gm18774-201ENSMUST00000218269 601 ntBASIC2□□□□□ -2.09
Usf1Q61069 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2□□□□□ -2.09
Usf1Q61069 AC116589.7-201ENSMUST00000221061 239 ntBASIC2□□□□□ -2.09
Usf1Q61069 AC164117.1-201ENSMUST00000221726 239 ntBASIC2□□□□□ -2.09
Usf1Q61069 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
Usf1Q61069 Gm1980-201ENSMUST00000123131 2306 ntBASIC2□□□□□ -2.09
Usf1Q61069 Gm43373-201ENSMUST00000202552 2870 ntBASIC2□□□□□ -2.09
Usf1Q61069 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.99□□□□□ -2.09
Usf1Q61069 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Usf1Q61069 Gm45558-201ENSMUST00000209384 1895 ntBASIC1.99□□□□□ -2.09
Usf1Q61069 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
Usf1Q61069 Gm24098-201ENSMUST00000102075 109 ntBASIC1.99□□□□□ -2.09
Usf1Q61069 Gm25381-201ENSMUST00000102078 109 ntBASIC1.99□□□□□ -2.09
Usf1Q61069 Mir450-2-201ENSMUST00000102444 69 ntBASIC1.99□□□□□ -2.09
Usf1Q61069 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
Usf1Q61069 Gm14013-201ENSMUST00000119006 270 ntBASIC1.99□□□□□ -2.09
Usf1Q61069 Gm15266-201ENSMUST00000119635 255 ntBASIC1.99□□□□□ -2.09
Usf1Q61069 Mir1942-201ENSMUST00000157274 63 ntBASIC1.99□□□□□ -2.09
Usf1Q61069 Gm23713-201ENSMUST00000157353 70 ntBASIC1.99□□□□□ -2.09
Usf1Q61069 Gm22615-201ENSMUST00000158102 70 ntBASIC1.99□□□□□ -2.09
Usf1Q61069 Gm8292-201ENSMUST00000162574 396 ntBASIC1.99□□□□□ -2.09
Usf1Q61069 Gm24304-201ENSMUST00000177635 107 ntBASIC1.99□□□□□ -2.09
Usf1Q61069 Gm23862-201ENSMUST00000180342 94 ntBASIC1.99□□□□□ -2.09
Usf1Q61069 Gm27753-201ENSMUST00000184742 203 ntBASIC1.99□□□□□ -2.09
Usf1Q61069 Gm37641-201ENSMUST00000193837 239 ntBASIC1.99□□□□□ -2.09
Usf1Q61069 Gm42925-201ENSMUST00000197359 285 ntBASIC1.99□□□□□ -2.09
Usf1Q61069 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC1.99□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 129.5 ms