Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Gm13672-201ENSMUST00000117554 459 ntBASIC0.71□□□□□ -2.3
Trav6d-4Q5R1I0 Gm14677-201ENSMUST00000117866 486 ntBASIC0.71□□□□□ -2.3
Trav6d-4Q5R1I0 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC0.71□□□□□ -2.3
Trav6d-4Q5R1I0 Gm6587-201ENSMUST00000120219 613 ntBASIC0.71□□□□□ -2.3
Trav6d-4Q5R1I0 Gm25637-201ENSMUST00000157529 107 ntBASIC0.71□□□□□ -2.3
Trav6d-4Q5R1I0 Gm22129-201ENSMUST00000179034 107 ntBASIC0.71□□□□□ -2.3
Trav6d-4Q5R1I0 Gm20118-201ENSMUST00000187207 162 ntBASIC0.71□□□□□ -2.3
Trav6d-4Q5R1I0 Ighv12-1-201ENSMUST00000195542 329 ntBASIC0.71□□□□□ -2.3
Trav6d-4Q5R1I0 Gm42533-201ENSMUST00000196247 157 ntBASIC0.71□□□□□ -2.3
Trav6d-4Q5R1I0 Gm19457-201ENSMUST00000200995 448 ntBASIC0.71□□□□□ -2.3
Trav6d-4Q5R1I0 AC172027.1-201ENSMUST00000217659 337 ntBASIC0.71□□□□□ -2.3
Trav6d-4Q5R1I0 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC0.71□□□□□ -2.3
Trav6d-4Q5R1I0 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
Trav6d-4Q5R1I0 Gm14774-201ENSMUST00000117857 536 ntBASIC0.7□□□□□ -2.3
Trav6d-4Q5R1I0 Gm14785-201ENSMUST00000120185 539 ntBASIC0.7□□□□□ -2.3
Trav6d-4Q5R1I0 Gm23473-201ENSMUST00000158883 116 ntBASIC0.7□□□□□ -2.3
Trav6d-4Q5R1I0 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
Trav6d-4Q5R1I0 Gm18358-201ENSMUST00000173179 1277 ntBASIC0.7□□□□□ -2.3
Trav6d-4Q5R1I0 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
Trav6d-4Q5R1I0 Mir8119-201ENSMUST00000183371 129 ntBASIC0.7□□□□□ -2.3
Trav6d-4Q5R1I0 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
Trav6d-4Q5R1I0 Gm19891-201ENSMUST00000189771 303 ntBASIC0.7□□□□□ -2.3
Trav6d-4Q5R1I0 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
Trav6d-4Q5R1I0 Gm29950-201ENSMUST00000195273 237 ntBASIC0.7□□□□□ -2.3
Trav6d-4Q5R1I0 Gm43493-201ENSMUST00000199837 202 ntBASIC0.7□□□□□ -2.3
Trav6d-4Q5R1I0 Gm43897-201ENSMUST00000204019 309 ntBASIC0.7□□□□□ -2.3
Trav6d-4Q5R1I0 CT010449.1-201ENSMUST00000220624 153 ntBASIC0.7□□□□□ -2.3
Trav6d-4Q5R1I0 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC0.69□□□□□ -2.3
Trav6d-4Q5R1I0 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
Trav6d-4Q5R1I0 Gm25274-201ENSMUST00000104296 135 ntBASIC0.69□□□□□ -2.3
Trav6d-4Q5R1I0 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC0.69□□□□□ -2.3
Trav6d-4Q5R1I0 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
Trav6d-4Q5R1I0 Gm14566-201ENSMUST00000118915 321 ntBASIC0.69□□□□□ -2.3
Trav6d-4Q5R1I0 Gm14945-201ENSMUST00000119556 1118 ntBASIC0.69□□□□□ -2.3
Trav6d-4Q5R1I0 Gm11891-201ENSMUST00000121241 619 ntBASIC0.69□□□□□ -2.3
Trav6d-4Q5R1I0 Gm6025-201ENSMUST00000121517 201 ntBASIC0.69□□□□□ -2.3
Trav6d-4Q5R1I0 Gm23205-201ENSMUST00000158671 103 ntBASIC0.69□□□□□ -2.3
Trav6d-4Q5R1I0 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC0.69□□□□□ -2.3
Trav6d-4Q5R1I0 Gm17162-201ENSMUST00000168538 473 ntBASIC0.69□□□□□ -2.3
Trav6d-4Q5R1I0 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC0.69□□□□□ -2.3
Trav6d-4Q5R1I0 Gm18340-201ENSMUST00000196342 609 ntBASIC0.69□□□□□ -2.3
Trav6d-4Q5R1I0 AC131068.1-201ENSMUST00000226891 482 ntBASIC0.69□□□□□ -2.3
Trav6d-4Q5R1I0 AC125464.1-201ENSMUST00000228013 512 ntBASIC0.69□□□□□ -2.3
Trav6d-4Q5R1I0 Olfr810-201ENSMUST00000091986 1006 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
Trav6d-4Q5R1I0 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
Trav6d-4Q5R1I0 Gm14879-201ENSMUST00000117308 507 ntBASIC0.68□□□□□ -2.3
Trav6d-4Q5R1I0 Gm2003-201ENSMUST00000118537 636 ntBASIC0.68□□□□□ -2.3
Trav6d-4Q5R1I0 Gm25666-201ENSMUST00000157702 107 ntBASIC0.68□□□□□ -2.3
Trav6d-4Q5R1I0 Gm2966-201ENSMUST00000166052 481 ntBASIC0.68□□□□□ -2.3
Trav6d-4Q5R1I0 Gm22776-201ENSMUST00000178634 94 ntBASIC0.68□□□□□ -2.3
Trav6d-4Q5R1I0 Gm23767-201ENSMUST00000179278 94 ntBASIC0.68□□□□□ -2.3
Trav6d-4Q5R1I0 Gm28000-201ENSMUST00000184380 85 ntBASIC0.68□□□□□ -2.3
Trav6d-4Q5R1I0 Gm28825-201ENSMUST00000186233 238 ntBASIC0.68□□□□□ -2.3
Trav6d-4Q5R1I0 Gm44050-201ENSMUST00000204263 527 ntBASIC0.68□□□□□ -2.3
Trav6d-4Q5R1I0 Gm44128-201ENSMUST00000204909 219 ntBASIC0.68□□□□□ -2.3
Trav6d-4Q5R1I0 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC0.68□□□□□ -2.3
Trav6d-4Q5R1I0 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC0.68□□□□□ -2.3
Trav6d-4Q5R1I0 AC147240.1-201ENSMUST00000218767 431 ntBASIC0.68□□□□□ -2.3
Trav6d-4Q5R1I0 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC0.68□□□□□ -2.3
Trav6d-4Q5R1I0 CT025602.1-201ENSMUST00000227281 382 ntBASIC0.68□□□□□ -2.3
Trav6d-4Q5R1I0 AC170600.1-201ENSMUST00000228763 277 ntBASIC0.68□□□□□ -2.3
Trav6d-4Q5R1I0 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC0.68□□□□□ -2.3
Trav6d-4Q5R1I0 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
Trav6d-4Q5R1I0 Gm23015-201ENSMUST00000104145 128 ntBASIC0.67□□□□□ -2.3
Trav6d-4Q5R1I0 Gm25170-201ENSMUST00000104191 129 ntBASIC0.67□□□□□ -2.3
Trav6d-4Q5R1I0 Mdga2-203ENSMUST00000113942 423 ntBASIC0.67□□□□□ -2.3
Trav6d-4Q5R1I0 Gm12656-201ENSMUST00000118149 577 ntBASIC0.67□□□□□ -2.3
Trav6d-4Q5R1I0 Gm23381-201ENSMUST00000157676 94 ntBASIC0.67□□□□□ -2.3
Trav6d-4Q5R1I0 Gm24846-201ENSMUST00000158033 108 ntBASIC0.67□□□□□ -2.3
Trav6d-4Q5R1I0 Gm17154-201ENSMUST00000165748 431 ntBASIC0.67□□□□□ -2.3
Trav6d-4Q5R1I0 Gm8207-201ENSMUST00000171204 502 ntBASIC0.67□□□□□ -2.3
Trav6d-4Q5R1I0 Gm22307-201ENSMUST00000180019 107 ntBASIC0.67□□□□□ -2.3
Trav6d-4Q5R1I0 Mir6540-201ENSMUST00000184886 108 ntBASIC0.67□□□□□ -2.3
Trav6d-4Q5R1I0 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC0.67□□□□□ -2.3
Trav6d-4Q5R1I0 Gm43402-201ENSMUST00000197159 159 ntBASIC0.67□□□□□ -2.3
Trav6d-4Q5R1I0 Gm18546-201ENSMUST00000197245 676 ntBASIC0.67□□□□□ -2.3
Trav6d-4Q5R1I0 Gm18635-201ENSMUST00000199020 1060 ntBASIC0.67□□□□□ -2.3
Trav6d-4Q5R1I0 Gm46994-201ENSMUST00000221523 219 ntBASIC0.67□□□□□ -2.3
Trav6d-4Q5R1I0 CT009713.9-201ENSMUST00000223604 389 ntBASIC0.67□□□□□ -2.3
Trav6d-4Q5R1I0 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
Trav6d-4Q5R1I0 Mir429-201ENSMUST00000083493 83 ntBASIC0.67□□□□□ -2.3
Trav6d-4Q5R1I0 Gm25411-201ENSMUST00000083760 151 ntBASIC0.67□□□□□ -2.3
Trav6d-4Q5R1I0 Gm14914-201ENSMUST00000117576 2031 ntBASIC0.67□□□□□ -2.3
Trav6d-4Q5R1I0 Gm44240-201ENSMUST00000204015 2654 ntBASIC0.67□□□□□ -2.3
Trav6d-4Q5R1I0 Gm24142-201ENSMUST00000101960 107 ntBASIC0.66□□□□□ -2.3
Trav6d-4Q5R1I0 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
Trav6d-4Q5R1I0 Gm22960-201ENSMUST00000122517 104 ntBASIC0.66□□□□□ -2.3
Trav6d-4Q5R1I0 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC0.66□□□□□ -2.3
Trav6d-4Q5R1I0 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
Trav6d-4Q5R1I0 Gm23170-201ENSMUST00000157158 106 ntBASIC0.66□□□□□ -2.3
Trav6d-4Q5R1I0 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.66□□□□□ -2.3
Trav6d-4Q5R1I0 Gm25312-201ENSMUST00000178972 107 ntBASIC0.66□□□□□ -2.3
Trav6d-4Q5R1I0 Gm16399-201ENSMUST00000181423 219 ntBASIC0.66□□□□□ -2.3
Trav6d-4Q5R1I0 Gm27588-201ENSMUST00000185096 263 ntBASIC0.66□□□□□ -2.3
Trav6d-4Q5R1I0 Gm5329-201ENSMUST00000186898 463 ntBASIC0.66□□□□□ -2.3
Trav6d-4Q5R1I0 Gm37005-201ENSMUST00000193281 1164 ntBASIC0.66□□□□□ -2.3
Trav6d-4Q5R1I0 Gm9251-201ENSMUST00000197202 628 ntBASIC0.66□□□□□ -2.3
Trav6d-4Q5R1I0 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC0.66□□□□□ -2.3
Trav6d-4Q5R1I0 Gm44654-201ENSMUST00000208052 329 ntBASIC0.66□□□□□ -2.3
Trav6d-4Q5R1I0 Gm3333-202ENSMUST00000221763 1044 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms