Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Mir344c-201ENSMUST00000103919 92 ntBASIC1.52□□□□□ -2.17
Trav3-3Q5R1C3 Gm25090-201ENSMUST00000104000 132 ntBASIC1.52□□□□□ -2.17
Trav3-3Q5R1C3 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC1.52□□□□□ -2.17
Trav3-3Q5R1C3 Gm13885-201ENSMUST00000117569 187 ntBASIC1.52□□□□□ -2.17
Trav3-3Q5R1C3 Gm14833-201ENSMUST00000118345 1027 ntBASIC1.52□□□□□ -2.17
Trav3-3Q5R1C3 Gm12304-201ENSMUST00000120312 385 ntBASIC1.52□□□□□ -2.17
Trav3-3Q5R1C3 Gm12639-201ENSMUST00000121400 493 ntBASIC1.52□□□□□ -2.17
Trav3-3Q5R1C3 Gm14530-201ENSMUST00000122391 333 ntBASIC1.52□□□□□ -2.17
Trav3-3Q5R1C3 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
Trav3-3Q5R1C3 Gm22818-201ENSMUST00000157446 104 ntBASIC1.52□□□□□ -2.17
Trav3-3Q5R1C3 Gm22817-201ENSMUST00000157448 356 ntBASIC1.52□□□□□ -2.17
Trav3-3Q5R1C3 Gm22386-201ENSMUST00000158192 129 ntBASIC1.52□□□□□ -2.17
Trav3-3Q5R1C3 Gm25012-201ENSMUST00000158396 164 ntBASIC1.52□□□□□ -2.17
Trav3-3Q5R1C3 Gm22093-201ENSMUST00000158980 111 ntBASIC1.52□□□□□ -2.17
Trav3-3Q5R1C3 Gm19932-201ENSMUST00000177033 313 ntBASIC1.52□□□□□ -2.17
Trav3-3Q5R1C3 Gm20660-201ENSMUST00000177515 289 ntBASIC1.52□□□□□ -2.17
Trav3-3Q5R1C3 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC1.52□□□□□ -2.17
Trav3-3Q5R1C3 Igkv12-49-201ENSMUST00000197714 278 ntBASIC1.52□□□□□ -2.17
Trav3-3Q5R1C3 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC1.52□□□□□ -2.17
Trav3-3Q5R1C3 Gm6796-201ENSMUST00000211919 243 ntBASIC1.52□□□□□ -2.17
Trav3-3Q5R1C3 AC158606.1-201ENSMUST00000220078 325 ntBASIC1.52□□□□□ -2.17
Trav3-3Q5R1C3 AC159709.1-201ENSMUST00000220445 349 ntBASIC1.52□□□□□ -2.17
Trav3-3Q5R1C3 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC1.52□□□□□ -2.17
Trav3-3Q5R1C3 AC166358.6-201ENSMUST00000221834 1206 ntBASIC1.52□□□□□ -2.17
Trav3-3Q5R1C3 AC164597.2-201ENSMUST00000226738 603 ntBASIC1.52□□□□□ -2.17
Trav3-3Q5R1C3 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.52□□□□□ -2.17
Trav3-3Q5R1C3 Gm22229-201ENSMUST00000082987 108 ntBASIC1.52□□□□□ -2.17
Trav3-3Q5R1C3 Gm25124-201ENSMUST00000083345 164 ntBASIC1.52□□□□□ -2.17
Trav3-3Q5R1C3 Mir107-201ENSMUST00000083660 87 ntBASIC1.52□□□□□ -2.17
Trav3-3Q5R1C3 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC1.52□□□□□ -2.17
Trav3-3Q5R1C3 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.52□□□□□ -2.17
Trav3-3Q5R1C3 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Trav3-3Q5R1C3 Gm43373-201ENSMUST00000202552 2870 ntBASIC1.51□□□□□ -2.17
Trav3-3Q5R1C3 Gm23422-201ENSMUST00000102000 107 ntBASIC1.51□□□□□ -2.17
Trav3-3Q5R1C3 n-R5s202-201ENSMUST00000104517 114 ntBASIC1.51□□□□□ -2.17
Trav3-3Q5R1C3 Gm26247-201ENSMUST00000116702 91 ntBASIC1.51□□□□□ -2.17
Trav3-3Q5R1C3 Gm13728-201ENSMUST00000117471 400 ntBASIC1.51□□□□□ -2.17
Trav3-3Q5R1C3 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC1.51□□□□□ -2.17
Trav3-3Q5R1C3 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC1.51□□□□□ -2.17
Trav3-3Q5R1C3 Gm23981-201ENSMUST00000157136 106 ntBASIC1.51□□□□□ -2.17
Trav3-3Q5R1C3 Gm23829-201ENSMUST00000157392 270 ntBASIC1.51□□□□□ -2.17
Trav3-3Q5R1C3 Gm24691-201ENSMUST00000157762 140 ntBASIC1.51□□□□□ -2.17
Trav3-3Q5R1C3 Gm25888-201ENSMUST00000157778 302 ntBASIC1.51□□□□□ -2.17
Trav3-3Q5R1C3 Gm25066-201ENSMUST00000158145 123 ntBASIC1.51□□□□□ -2.17
Trav3-3Q5R1C3 Gm9593-201ENSMUST00000166034 469 ntBASIC1.51□□□□□ -2.17
Trav3-3Q5R1C3 Gm17072-201ENSMUST00000166673 658 ntBASIC1.51□□□□□ -2.17
Trav3-3Q5R1C3 Gm25994-201ENSMUST00000175392 101 ntBASIC1.51□□□□□ -2.17
Trav3-3Q5R1C3 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC1.51□□□□□ -2.17
Trav3-3Q5R1C3 Gm25457-201ENSMUST00000179509 107 ntBASIC1.51□□□□□ -2.17
Trav3-3Q5R1C3 Gm23862-201ENSMUST00000180342 94 ntBASIC1.51□□□□□ -2.17
Trav3-3Q5R1C3 Gm37361-201ENSMUST00000194345 132 ntBASIC1.51□□□□□ -2.17
Trav3-3Q5R1C3 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Trav3-3Q5R1C3 Gm42509-201ENSMUST00000197390 781 ntBASIC1.51□□□□□ -2.17
Trav3-3Q5R1C3 Snord43-201ENSMUST00000199549 108 ntBASIC1.51□□□□□ -2.17
Trav3-3Q5R1C3 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
Trav3-3Q5R1C3 Gm44011-201ENSMUST00000203336 394 ntBASIC1.51□□□□□ -2.17
Trav3-3Q5R1C3 Gm44161-201ENSMUST00000203532 253 ntBASIC1.51□□□□□ -2.17
Trav3-3Q5R1C3 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC1.51□□□□□ -2.17
Trav3-3Q5R1C3 AC069561.2-201ENSMUST00000217596 420 ntBASIC1.51□□□□□ -2.17
Trav3-3Q5R1C3 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC1.51□□□□□ -2.17
Trav3-3Q5R1C3 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
Trav3-3Q5R1C3 AC153646.1-201ENSMUST00000223229 1279 ntBASIC1.51□□□□□ -2.17
Trav3-3Q5R1C3 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Trav3-3Q5R1C3 Mir151-201ENSMUST00000083678 68 ntBASIC1.51□□□□□ -2.17
Trav3-3Q5R1C3 Mir127-201ENSMUST00000093568 70 ntBASIC1.51□□□□□ -2.17
Trav3-3Q5R1C3 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Trav3-3Q5R1C3 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Trav3-3Q5R1C3 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC1.5□□□□□ -2.17
Trav3-3Q5R1C3 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Trav3-3Q5R1C3 Gm13409-201ENSMUST00000122072 546 ntBASIC1.5□□□□□ -2.17
Trav3-3Q5R1C3 Gm15077-201ENSMUST00000122344 362 ntBASIC1.5□□□□□ -2.17
Trav3-3Q5R1C3 Gm23184-201ENSMUST00000122594 131 ntBASIC1.5□□□□□ -2.17
Trav3-3Q5R1C3 Gm23889-201ENSMUST00000122689 104 ntBASIC1.5□□□□□ -2.17
Trav3-3Q5R1C3 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC1.5□□□□□ -2.17
Trav3-3Q5R1C3 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC1.5□□□□□ -2.17
Trav3-3Q5R1C3 Gm17161-201ENSMUST00000169187 524 ntBASIC1.5□□□□□ -2.17
Trav3-3Q5R1C3 Gm27249-201ENSMUST00000185049 328 ntBASIC1.5□□□□□ -2.17
Trav3-3Q5R1C3 Gm27588-201ENSMUST00000185096 263 ntBASIC1.5□□□□□ -2.17
Trav3-3Q5R1C3 Gm28900-201ENSMUST00000185232 156 ntBASIC1.5□□□□□ -2.17
Trav3-3Q5R1C3 Gm18356-201ENSMUST00000185677 623 ntBASIC1.5□□□□□ -2.17
Trav3-3Q5R1C3 AC121844.1-201ENSMUST00000218706 137 ntBASIC1.5□□□□□ -2.17
Trav3-3Q5R1C3 AC159203.2-201ENSMUST00000221326 193 ntBASIC1.5□□□□□ -2.17
Trav3-3Q5R1C3 AC156560.1-201ENSMUST00000221425 256 ntBASIC1.5□□□□□ -2.17
Trav3-3Q5R1C3 AC174797.4-201ENSMUST00000225510 347 ntBASIC1.5□□□□□ -2.17
Trav3-3Q5R1C3 n-R5s37-201ENSMUST00000082533 118 ntBASIC1.5□□□□□ -2.17
Trav3-3Q5R1C3 Mir29c-201ENSMUST00000083614 88 ntBASIC1.5□□□□□ -2.17
Trav3-3Q5R1C3 Snora33-201ENSMUST00000093556 129 ntBASIC1.5□□□□□ -2.17
Trav3-3Q5R1C3 Gm45558-201ENSMUST00000209384 1895 ntBASIC1.5□□□□□ -2.17
Trav3-3Q5R1C3 Gm22591-201ENSMUST00000104243 106 ntBASIC1.49□□□□□ -2.17
Trav3-3Q5R1C3 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC1.49□□□□□ -2.17
Trav3-3Q5R1C3 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
Trav3-3Q5R1C3 Gm6806-201ENSMUST00000120092 1006 ntBASIC1.49□□□□□ -2.17
Trav3-3Q5R1C3 Gm11786-201ENSMUST00000120799 155 ntBASIC1.49□□□□□ -2.17
Trav3-3Q5R1C3 Gm24627-201ENSMUST00000122764 138 ntBASIC1.49□□□□□ -2.17
Trav3-3Q5R1C3 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC1.49□□□□□ -2.17
Trav3-3Q5R1C3 Gm25625-201ENSMUST00000157221 96 ntBASIC1.49□□□□□ -2.17
Trav3-3Q5R1C3 Gm22727-201ENSMUST00000158090 116 ntBASIC1.49□□□□□ -2.17
Trav3-3Q5R1C3 Gm24922-201ENSMUST00000158511 102 ntBASIC1.49□□□□□ -2.17
Trav3-3Q5R1C3 Gm23025-201ENSMUST00000158769 111 ntBASIC1.49□□□□□ -2.17
Trav3-3Q5R1C3 Gm24885-201ENSMUST00000158783 270 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 93.4 ms