Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Gm44133-202ENSMUST00000204450 2586 ntBASIC1.92□□□□□ -2.1
Trav8d-2Q5R1B6 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Trav8d-2Q5R1B6 Gm25832-201ENSMUST00000104140 130 ntBASIC1.91□□□□□ -2.1
Trav8d-2Q5R1B6 Gm15807-201ENSMUST00000119880 1128 ntBASIC1.91□□□□□ -2.1
Trav8d-2Q5R1B6 Gm14588-201ENSMUST00000119895 172 ntBASIC1.91□□□□□ -2.1
Trav8d-2Q5R1B6 Gm13602-201ENSMUST00000122405 493 ntBASIC1.91□□□□□ -2.1
Trav8d-2Q5R1B6 Gm22038-201ENSMUST00000157277 242 ntBASIC1.91□□□□□ -2.1
Trav8d-2Q5R1B6 Gm23033-201ENSMUST00000157996 134 ntBASIC1.91□□□□□ -2.1
Trav8d-2Q5R1B6 Gm23317-201ENSMUST00000157999 129 ntBASIC1.91□□□□□ -2.1
Trav8d-2Q5R1B6 Gm23025-201ENSMUST00000158769 111 ntBASIC1.91□□□□□ -2.1
Trav8d-2Q5R1B6 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC1.91□□□□□ -2.1
Trav8d-2Q5R1B6 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Trav8d-2Q5R1B6 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC1.91□□□□□ -2.1
Trav8d-2Q5R1B6 Snord116l12-201ENSMUST00000179816 94 ntBASIC1.91□□□□□ -2.1
Trav8d-2Q5R1B6 Mir6353-201ENSMUST00000183596 113 ntBASIC1.91□□□□□ -2.1
Trav8d-2Q5R1B6 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC1.91□□□□□ -2.1
Trav8d-2Q5R1B6 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC1.91□□□□□ -2.1
Trav8d-2Q5R1B6 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC1.91□□□□□ -2.1
Trav8d-2Q5R1B6 AC069561.2-201ENSMUST00000217596 420 ntBASIC1.91□□□□□ -2.1
Trav8d-2Q5R1B6 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC1.91□□□□□ -2.1
Trav8d-2Q5R1B6 Olfr575-201ENSMUST00000084812 957 ntBASIC1.91□□□□□ -2.1
Trav8d-2Q5R1B6 Gm26327-201ENSMUST00000093724 111 ntBASIC1.91□□□□□ -2.1
Trav8d-2Q5R1B6 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Trav8d-2Q5R1B6 Gm22486-201ENSMUST00000116815 137 ntBASIC1.9□□□□□ -2.11
Trav8d-2Q5R1B6 Gm22151-201ENSMUST00000116963 58 ntBASIC1.9□□□□□ -2.11
Trav8d-2Q5R1B6 Gm14765-201ENSMUST00000121954 326 ntBASIC1.9□□□□□ -2.11
Trav8d-2Q5R1B6 n-R5s80-201ENSMUST00000122596 111 ntBASIC1.9□□□□□ -2.11
Trav8d-2Q5R1B6 Gm24241-201ENSMUST00000157787 145 ntBASIC1.9□□□□□ -2.11
Trav8d-2Q5R1B6 Gm18416-201ENSMUST00000175635 1003 ntBASIC1.9□□□□□ -2.11
Trav8d-2Q5R1B6 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC1.9□□□□□ -2.11
Trav8d-2Q5R1B6 Gm24304-201ENSMUST00000177635 107 ntBASIC1.9□□□□□ -2.11
Trav8d-2Q5R1B6 Gm23267-201ENSMUST00000178490 132 ntBASIC1.9□□□□□ -2.11
Trav8d-2Q5R1B6 Gm22633-201ENSMUST00000179834 107 ntBASIC1.9□□□□□ -2.11
Trav8d-2Q5R1B6 Mir6370-201ENSMUST00000183510 120 ntBASIC1.9□□□□□ -2.11
Trav8d-2Q5R1B6 Gm28825-201ENSMUST00000186233 238 ntBASIC1.9□□□□□ -2.11
Trav8d-2Q5R1B6 Gm28951-201ENSMUST00000190742 313 ntBASIC1.9□□□□□ -2.11
Trav8d-2Q5R1B6 Gm32033-201ENSMUST00000193483 339 ntBASIC1.9□□□□□ -2.11
Trav8d-2Q5R1B6 Gm37709-201ENSMUST00000195074 600 ntBASIC1.9□□□□□ -2.11
Trav8d-2Q5R1B6 Gm33354-201ENSMUST00000195448 906 ntBASIC1.9□□□□□ -2.11
Trav8d-2Q5R1B6 Gm9236-201ENSMUST00000196892 587 ntBASIC1.9□□□□□ -2.11
Trav8d-2Q5R1B6 Mir7021-201ENSMUST00000197026 63 ntBASIC1.9□□□□□ -2.11
Trav8d-2Q5R1B6 Gm43669-201ENSMUST00000198229 436 ntBASIC1.9□□□□□ -2.11
Trav8d-2Q5R1B6 Gm42164-201ENSMUST00000198881 379 ntBASIC1.9□□□□□ -2.11
Trav8d-2Q5R1B6 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC1.9□□□□□ -2.11
Trav8d-2Q5R1B6 Gm42475-201ENSMUST00000201212 295 ntBASIC1.9□□□□□ -2.11
Trav8d-2Q5R1B6 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
Trav8d-2Q5R1B6 Gm44825-201ENSMUST00000207557 150 ntBASIC1.9□□□□□ -2.11
Trav8d-2Q5R1B6 Gm44598-201ENSMUST00000207566 150 ntBASIC1.9□□□□□ -2.11
Trav8d-2Q5R1B6 AL450317.1-201ENSMUST00000213941 291 ntBASIC1.9□□□□□ -2.11
Trav8d-2Q5R1B6 Gm7065-201ENSMUST00000222150 474 ntBASIC1.9□□□□□ -2.11
Trav8d-2Q5R1B6 AC102291.2-201ENSMUST00000228083 367 ntBASIC1.9□□□□□ -2.11
Trav8d-2Q5R1B6 Gm5471-201ENSMUST00000072732 337 ntBASIC1.9□□□□□ -2.11
Trav8d-2Q5R1B6 Gm10298-201ENSMUST00000074801 265 ntBASIC1.9□□□□□ -2.11
Trav8d-2Q5R1B6 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
Trav8d-2Q5R1B6 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC1.9□□□□□ -2.11
Trav8d-2Q5R1B6 Gm22229-201ENSMUST00000082987 108 ntBASIC1.9□□□□□ -2.11
Trav8d-2Q5R1B6 Gm26126-201ENSMUST00000083188 164 ntBASIC1.9□□□□□ -2.11
Trav8d-2Q5R1B6 Snora33-201ENSMUST00000093556 129 ntBASIC1.9□□□□□ -2.11
Trav8d-2Q5R1B6 Mir1942-201ENSMUST00000157274 63 ntBASIC1.89□□□□□ -2.11
Trav8d-2Q5R1B6 Gm22733-201ENSMUST00000158094 91 ntBASIC1.89□□□□□ -2.11
Trav8d-2Q5R1B6 Gm22527-201ENSMUST00000158816 106 ntBASIC1.89□□□□□ -2.11
Trav8d-2Q5R1B6 Gm25243-201ENSMUST00000174912 207 ntBASIC1.89□□□□□ -2.11
Trav8d-2Q5R1B6 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
Trav8d-2Q5R1B6 Ighv1-32-201ENSMUST00000195149 351 ntBASIC1.89□□□□□ -2.11
Trav8d-2Q5R1B6 Gm42925-201ENSMUST00000197359 285 ntBASIC1.89□□□□□ -2.11
Trav8d-2Q5R1B6 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.89□□□□□ -2.11
Trav8d-2Q5R1B6 AC116726.2-201ENSMUST00000217629 986 ntBASIC1.89□□□□□ -2.11
Trav8d-2Q5R1B6 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC1.89□□□□□ -2.11
Trav8d-2Q5R1B6 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Trav8d-2Q5R1B6 n-R5s37-201ENSMUST00000082533 118 ntBASIC1.89□□□□□ -2.11
Trav8d-2Q5R1B6 Snord14d-201ENSMUST00000083424 86 ntBASIC1.89□□□□□ -2.11
Trav8d-2Q5R1B6 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Trav8d-2Q5R1B6 Gm381-201ENSMUST00000117443 2037 ntBASIC1.89□□□□□ -2.11
Trav8d-2Q5R1B6 AC122828.3-201ENSMUST00000223019 3915 ntBASIC1.89□□□□□ -2.11
Trav8d-2Q5R1B6 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Trav8d-2Q5R1B6 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC1.89□□□□□ -2.11
Trav8d-2Q5R1B6 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
Trav8d-2Q5R1B6 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
Trav8d-2Q5R1B6 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Trav8d-2Q5R1B6 Gm25068-201ENSMUST00000103895 110 ntBASIC1.88□□□□□ -2.11
Trav8d-2Q5R1B6 Gm12584-201ENSMUST00000117109 1105 ntBASIC1.88□□□□□ -2.11
Trav8d-2Q5R1B6 Gm13331-201ENSMUST00000117500 448 ntBASIC1.88□□□□□ -2.11
Trav8d-2Q5R1B6 Gm14793-201ENSMUST00000118739 311 ntBASIC1.88□□□□□ -2.11
Trav8d-2Q5R1B6 Gm24846-201ENSMUST00000158033 108 ntBASIC1.88□□□□□ -2.11
Trav8d-2Q5R1B6 Mir5101-201ENSMUST00000175181 83 ntBASIC1.88□□□□□ -2.11
Trav8d-2Q5R1B6 Gm37000-201ENSMUST00000193058 428 ntBASIC1.88□□□□□ -2.11
Trav8d-2Q5R1B6 Gm37771-201ENSMUST00000193121 265 ntBASIC1.88□□□□□ -2.11
Trav8d-2Q5R1B6 Gm38167-201ENSMUST00000195704 1178 ntBASIC1.88□□□□□ -2.11
Trav8d-2Q5R1B6 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC1.88□□□□□ -2.11
Trav8d-2Q5R1B6 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC1.88□□□□□ -2.11
Trav8d-2Q5R1B6 Gm19032-201ENSMUST00000208584 592 ntBASIC1.88□□□□□ -2.11
Trav8d-2Q5R1B6 Gm45658-201ENSMUST00000209197 580 ntBASIC1.88□□□□□ -2.11
Trav8d-2Q5R1B6 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC1.88□□□□□ -2.11
Trav8d-2Q5R1B6 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC1.88□□□□□ -2.11
Trav8d-2Q5R1B6 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC1.88□□□□□ -2.11
Trav8d-2Q5R1B6 AC120553.1-201ENSMUST00000227313 260 ntBASIC1.88□□□□□ -2.11
Trav8d-2Q5R1B6 Gm23454-201ENSMUST00000083332 133 ntBASIC1.88□□□□□ -2.11
Trav8d-2Q5R1B6 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Trav8d-2Q5R1B6 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Trav8d-2Q5R1B6 AC157570.1-201ENSMUST00000218052 3778 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms