Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Gm43529-201ENSMUST00000199178 412 ntBASIC3.93□□□□□ -1.78
Rnf180Q3U827 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC3.93□□□□□ -1.78
Rnf180Q3U827 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC3.93□□□□□ -1.78
Rnf180Q3U827 AC164297.3-201ENSMUST00000224238 94 ntBASIC3.93□□□□□ -1.78
Rnf180Q3U827 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC3.93□□□□□ -1.78
Rnf180Q3U827 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
Rnf180Q3U827 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Rnf180Q3U827 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Rnf180Q3U827 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC3.93□□□□□ -1.78
Rnf180Q3U827 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
Rnf180Q3U827 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
Rnf180Q3U827 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Rnf180Q3U827 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Rnf180Q3U827 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
Rnf180Q3U827 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Rnf180Q3U827 Gm13343-201ENSMUST00000116474 105 ntBASIC3.92□□□□□ -1.78
Rnf180Q3U827 Gm24720-201ENSMUST00000157518 166 ntBASIC3.92□□□□□ -1.78
Rnf180Q3U827 Gm23592-201ENSMUST00000157859 117 ntBASIC3.92□□□□□ -1.78
Rnf180Q3U827 Gm27510-201ENSMUST00000158214 64 ntBASIC3.92□□□□□ -1.78
Rnf180Q3U827 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC3.92□□□□□ -1.78
Rnf180Q3U827 Gm23053-201ENSMUST00000175136 96 ntBASIC3.92□□□□□ -1.78
Rnf180Q3U827 Gm25642-201ENSMUST00000175137 66 ntBASIC3.92□□□□□ -1.78
Rnf180Q3U827 Mir3076-201ENSMUST00000175415 60 ntBASIC3.92□□□□□ -1.78
Rnf180Q3U827 Gm26061-201ENSMUST00000175584 108 ntBASIC3.92□□□□□ -1.78
Rnf180Q3U827 Gm21893-201ENSMUST00000179119 397 ntBASIC3.92□□□□□ -1.78
Rnf180Q3U827 Mir6346-201ENSMUST00000183982 81 ntBASIC3.92□□□□□ -1.78
Rnf180Q3U827 Gm29397-201ENSMUST00000185205 333 ntBASIC3.92□□□□□ -1.78
Rnf180Q3U827 AC130829.3-201ENSMUST00000222735 154 ntBASIC3.92□□□□□ -1.78
Rnf180Q3U827 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.92□□□□□ -1.78
Rnf180Q3U827 AC154262.1-201ENSMUST00000225976 286 ntBASIC3.92□□□□□ -1.78
Rnf180Q3U827 Gm25636-201ENSMUST00000082666 133 ntBASIC3.92□□□□□ -1.78
Rnf180Q3U827 Gm37747-201ENSMUST00000193717 4003 ntBASIC3.92□□□□□ -1.78
Rnf180Q3U827 Gm42639-201ENSMUST00000197061 1871 ntBASIC3.92□□□□□ -1.78
Rnf180Q3U827 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC3.92□□□□□ -1.78
Rnf180Q3U827 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC3.91□□□□□ -1.78
Rnf180Q3U827 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Rnf180Q3U827 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC3.91□□□□□ -1.78
Rnf180Q3U827 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Rnf180Q3U827 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Rnf180Q3U827 Gm15212-201ENSMUST00000122403 466 ntBASIC3.91□□□□□ -1.78
Rnf180Q3U827 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Rnf180Q3U827 Gm24914-201ENSMUST00000157285 313 ntBASIC3.91□□□□□ -1.78
Rnf180Q3U827 Gm22598-201ENSMUST00000157600 127 ntBASIC3.91□□□□□ -1.78
Rnf180Q3U827 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC3.91□□□□□ -1.78
Rnf180Q3U827 Gm29665-201ENSMUST00000191457 528 ntBASIC3.91□□□□□ -1.78
Rnf180Q3U827 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Rnf180Q3U827 Gm9379-201ENSMUST00000196790 646 ntBASIC3.91□□□□□ -1.78
Rnf180Q3U827 Igkv4-65-201ENSMUST00000196986 358 ntBASIC3.91□□□□□ -1.78
Rnf180Q3U827 Gm42925-201ENSMUST00000197359 285 ntBASIC3.91□□□□□ -1.78
Rnf180Q3U827 Gm18982-201ENSMUST00000198118 529 ntBASIC3.91□□□□□ -1.78
Rnf180Q3U827 Gm5358-201ENSMUST00000212814 353 ntBASIC3.91□□□□□ -1.78
Rnf180Q3U827 Gm24698-201ENSMUST00000083883 130 ntBASIC3.91□□□□□ -1.78
Rnf180Q3U827 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Rnf180Q3U827 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC3.91□□□□□ -1.78
Rnf180Q3U827 Olfr1123-203ENSMUST00000216208 5245 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
Rnf180Q3U827 Gm37498-201ENSMUST00000193524 4002 ntBASIC3.91□□□□□ -1.78
Rnf180Q3U827 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Rnf180Q3U827 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Rnf180Q3U827 Olfr1309-206ENSMUST00000217452 5257 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Rnf180Q3U827 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Rnf180Q3U827 Gm37298-201ENSMUST00000193770 3868 ntBASIC3.9□□□□□ -1.78
Rnf180Q3U827 AC124346.2-201ENSMUST00000217986 5083 ntBASIC3.9□□□□□ -1.78
Rnf180Q3U827 Gm13378-201ENSMUST00000117483 336 ntBASIC3.9□□□□□ -1.79
Rnf180Q3U827 Gm7123-201ENSMUST00000117647 213 ntBASIC3.9□□□□□ -1.79
Rnf180Q3U827 Gm14298-201ENSMUST00000139032 237 ntBASIC3.9□□□□□ -1.79
Rnf180Q3U827 Gm16356-201ENSMUST00000143300 169 ntBASIC3.9□□□□□ -1.79
Rnf180Q3U827 Gm26414-201ENSMUST00000157674 269 ntBASIC3.9□□□□□ -1.79
Rnf180Q3U827 Gm25718-201ENSMUST00000158632 118 ntBASIC3.9□□□□□ -1.79
Rnf180Q3U827 Gm25362-201ENSMUST00000158854 105 ntBASIC3.9□□□□□ -1.79
Rnf180Q3U827 Gm37715-201ENSMUST00000193206 235 ntBASIC3.9□□□□□ -1.79
Rnf180Q3U827 Gm9402-201ENSMUST00000196849 388 ntBASIC3.9□□□□□ -1.79
Rnf180Q3U827 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC3.9□□□□□ -1.79
Rnf180Q3U827 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.79
Rnf180Q3U827 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC3.9□□□□□ -1.79
Rnf180Q3U827 CT010454.1-201ENSMUST00000225975 265 ntBASIC3.9□□□□□ -1.79
Rnf180Q3U827 AC155167.3-201ENSMUST00000226349 217 ntBASIC3.9□□□□□ -1.79
Rnf180Q3U827 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Rnf180Q3U827 Gm26066-201ENSMUST00000083385 109 ntBASIC3.9□□□□□ -1.79
Rnf180Q3U827 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
Rnf180Q3U827 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Rnf180Q3U827 Gm7470-201ENSMUST00000194219 2095 ntBASIC3.9□□□□□ -1.79
Rnf180Q3U827 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Rnf180Q3U827 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
Rnf180Q3U827 Gm11936-201ENSMUST00000118323 160 ntBASIC3.89□□□□□ -1.79
Rnf180Q3U827 Gm22839-201ENSMUST00000158436 304 ntBASIC3.89□□□□□ -1.79
Rnf180Q3U827 Gm24086-201ENSMUST00000175171 98 ntBASIC3.89□□□□□ -1.79
Rnf180Q3U827 Gm24811-201ENSMUST00000175313 100 ntBASIC3.89□□□□□ -1.79
Rnf180Q3U827 Gm23152-201ENSMUST00000175322 116 ntBASIC3.89□□□□□ -1.79
Rnf180Q3U827 Gm28288-201ENSMUST00000191019 214 ntBASIC3.89□□□□□ -1.79
Rnf180Q3U827 Gm9251-201ENSMUST00000197202 628 ntBASIC3.89□□□□□ -1.79
Rnf180Q3U827 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Rnf180Q3U827 Gm45005-201ENSMUST00000206640 157 ntBASIC3.89□□□□□ -1.79
Rnf180Q3U827 Gm45315-201ENSMUST00000209283 333 ntBASIC3.89□□□□□ -1.79
Rnf180Q3U827 Gm45452-201ENSMUST00000210905 177 ntBASIC3.89□□□□□ -1.79
Rnf180Q3U827 Gm25257-201ENSMUST00000083907 110 ntBASIC3.89□□□□□ -1.79
Rnf180Q3U827 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.89□□□□□ -1.79
Rnf180Q3U827 Hm629797-201ENSMUST00000183645 2398 ntBASIC3.89□□□□□ -1.79
Rnf180Q3U827 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
Rnf180Q3U827 Gm42486-201ENSMUST00000200369 3486 ntBASIC3.88□□□□□ -1.79
Rnf180Q3U827 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 91.5 ms