Protein–RNA interactions for Protein: Q3U1J4

Ddb1, DNA damage-binding protein 1, mousemouse

Known RBP Predictions only

Length 1,140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1Q3U1J4 Gm44083-201ENSMUST00000203114 337 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm29818-201ENSMUST00000218070 165 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 AC138290.2-201ENSMUST00000218822 369 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm45815-201ENSMUST00000220241 146 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 AC159188.1-201ENSMUST00000225198 526 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm23629-201ENSMUST00000082465 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm23924-201ENSMUST00000082474 108 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm22246-201ENSMUST00000082478 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm22749-201ENSMUST00000082490 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm22747-201ENSMUST00000082495 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm22063-201ENSMUST00000082560 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm23057-201ENSMUST00000082801 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm26328-201ENSMUST00000082821 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm26331-201ENSMUST00000082824 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm24205-201ENSMUST00000082953 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm25405-201ENSMUST00000082973 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm22628-201ENSMUST00000082988 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm26324-201ENSMUST00000083073 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm24535-201ENSMUST00000083140 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm26496-201ENSMUST00000083150 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm26127-201ENSMUST00000083193 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm24456-201ENSMUST00000083198 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm24458-201ENSMUST00000083204 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm24018-201ENSMUST00000083232 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm25794-201ENSMUST00000083286 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm25790-201ENSMUST00000083293 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm22295-201ENSMUST00000083311 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm25127-201ENSMUST00000083336 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm25583-201ENSMUST00000083413 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm25577-201ENSMUST00000083414 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm24414-201ENSMUST00000083434 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm24861-201ENSMUST00000083459 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm24803-201ENSMUST00000083693 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm23103-201ENSMUST00000083725 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm22580-201ENSMUST00000083727 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm24260-201ENSMUST00000083741 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm23732-201ENSMUST00000083751 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm22682-201ENSMUST00000083854 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm25869-201ENSMUST00000083855 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm24693-201ENSMUST00000083885 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm26317-201ENSMUST00000083894 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm22352-201ENSMUST00000083917 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm24448-201ENSMUST00000083979 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm22798-201ENSMUST00000083992 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm26427-201ENSMUST00000093648 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm22886-201ENSMUST00000093714 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm22170-201ENSMUST00000097247 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm43879-201ENSMUST00000203811 3760 ntBASIC3.85□□□□□ -1.79
Ddb1Q3U1J4 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.85□□□□□ -1.79
Ddb1Q3U1J4 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Ddb1Q3U1J4 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Ddb1Q3U1J4 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Ddb1Q3U1J4 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Ddb1Q3U1J4 Gm16242-201ENSMUST00000117741 334 ntBASIC3.85□□□□□ -1.79
Ddb1Q3U1J4 Gm15844-201ENSMUST00000118016 576 ntBASIC3.85□□□□□ -1.79
Ddb1Q3U1J4 Gm14940-201ENSMUST00000119309 495 ntBASIC3.85□□□□□ -1.79
Ddb1Q3U1J4 Gm11862-201ENSMUST00000119678 659 ntBASIC3.85□□□□□ -1.79
Ddb1Q3U1J4 Gm13518-201ENSMUST00000120018 233 ntBASIC3.85□□□□□ -1.79
Ddb1Q3U1J4 Gm23779-201ENSMUST00000157938 64 ntBASIC3.85□□□□□ -1.79
Ddb1Q3U1J4 Gm16232-201ENSMUST00000162856 167 ntBASIC3.85□□□□□ -1.79
Ddb1Q3U1J4 Gm25198-201ENSMUST00000178574 110 ntBASIC3.85□□□□□ -1.79
Ddb1Q3U1J4 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
Ddb1Q3U1J4 Gm38356-201ENSMUST00000194313 408 ntBASIC3.85□□□□□ -1.79
Ddb1Q3U1J4 Gm18433-202ENSMUST00000195682 196 ntBASIC3.85□□□□□ -1.79
Ddb1Q3U1J4 Gm34073-201ENSMUST00000195736 212 ntBASIC3.85□□□□□ -1.79
Ddb1Q3U1J4 Gm44055-201ENSMUST00000204376 247 ntBASIC3.85□□□□□ -1.79
Ddb1Q3U1J4 Gm18453-201ENSMUST00000208000 626 ntBASIC3.85□□□□□ -1.79
Ddb1Q3U1J4 AC171206.2-201ENSMUST00000215252 389 ntBASIC3.85□□□□□ -1.79
Ddb1Q3U1J4 AC069074.2-201ENSMUST00000217819 428 ntBASIC3.85□□□□□ -1.79
Ddb1Q3U1J4 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC3.85□□□□□ -1.79
Ddb1Q3U1J4 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Ddb1Q3U1J4 Gm23721-201ENSMUST00000083005 107 ntBASIC3.85□□□□□ -1.79
Ddb1Q3U1J4 Gm25410-201ENSMUST00000083758 137 ntBASIC3.85□□□□□ -1.79
Ddb1Q3U1J4 Gm10212-201ENSMUST00000087884 324 ntBASIC3.85□□□□□ -1.79
Ddb1Q3U1J4 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Ddb1Q3U1J4 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Ddb1Q3U1J4 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Ddb1Q3U1J4 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Ddb1Q3U1J4 Gm26247-201ENSMUST00000116702 91 ntBASIC3.84□□□□□ -1.79
Ddb1Q3U1J4 Gm11363-201ENSMUST00000121672 548 ntBASIC3.84□□□□□ -1.79
Ddb1Q3U1J4 Gm16358-201ENSMUST00000146046 210 ntBASIC3.84□□□□□ -1.79
Ddb1Q3U1J4 Gm22843-201ENSMUST00000157710 134 ntBASIC3.84□□□□□ -1.79
Ddb1Q3U1J4 Gm22516-201ENSMUST00000158266 124 ntBASIC3.84□□□□□ -1.79
Ddb1Q3U1J4 Gm25902-201ENSMUST00000158493 318 ntBASIC3.84□□□□□ -1.79
Ddb1Q3U1J4 Gm24922-201ENSMUST00000158511 102 ntBASIC3.84□□□□□ -1.79
Ddb1Q3U1J4 Gm17062-201ENSMUST00000166987 461 ntBASIC3.84□□□□□ -1.79
Ddb1Q3U1J4 Mir195b-201ENSMUST00000184814 97 ntBASIC3.84□□□□□ -1.79
Ddb1Q3U1J4 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC3.84□□□□□ -1.79
Ddb1Q3U1J4 Gm21088-201ENSMUST00000190875 316 ntBASIC3.84□□□□□ -1.79
Ddb1Q3U1J4 Gm18982-201ENSMUST00000198118 529 ntBASIC3.84□□□□□ -1.79
Ddb1Q3U1J4 Gm44959-201ENSMUST00000209127 231 ntBASIC3.84□□□□□ -1.79
Ddb1Q3U1J4 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC3.84□□□□□ -1.79
Ddb1Q3U1J4 AC160984.2-201ENSMUST00000224927 791 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 439.7 ms