Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Gm25535-201ENSMUST00000175364 125 ntBASIC3.41□□□□□ -1.86
Usp39Q3TIX9 Gm27903-201ENSMUST00000175482 126 ntBASIC3.41□□□□□ -1.86
Usp39Q3TIX9 Gm25175-201ENSMUST00000178712 79 ntBASIC3.41□□□□□ -1.86
Usp39Q3TIX9 Gm17966-201ENSMUST00000193453 594 ntBASIC3.41□□□□□ -1.86
Usp39Q3TIX9 Gm43704-201ENSMUST00000196164 496 ntBASIC3.41□□□□□ -1.86
Usp39Q3TIX9 AC126267.1-201ENSMUST00000214282 284 ntBASIC3.41□□□□□ -1.86
Usp39Q3TIX9 Gm25205-201ENSMUST00000082841 103 ntBASIC3.41□□□□□ -1.86
Usp39Q3TIX9 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Usp39Q3TIX9 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
Usp39Q3TIX9 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Usp39Q3TIX9 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Usp39Q3TIX9 AC115047.2-201ENSMUST00000214421 1848 ntBASIC3.41□□□□□ -1.86
Usp39Q3TIX9 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC3.41□□□□□ -1.86
Usp39Q3TIX9 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
Usp39Q3TIX9 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.41□□□□□ -1.86
Usp39Q3TIX9 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
Usp39Q3TIX9 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
Usp39Q3TIX9 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.4□□□□□ -1.86
Usp39Q3TIX9 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Usp39Q3TIX9 Gm24423-201ENSMUST00000101982 106 ntBASIC3.4□□□□□ -1.87
Usp39Q3TIX9 Gm22497-201ENSMUST00000104499 131 ntBASIC3.4□□□□□ -1.87
Usp39Q3TIX9 Gm6265-201ENSMUST00000149263 231 ntBASIC3.4□□□□□ -1.87
Usp39Q3TIX9 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC3.4□□□□□ -1.87
Usp39Q3TIX9 Gm23667-201ENSMUST00000157466 120 ntBASIC3.4□□□□□ -1.87
Usp39Q3TIX9 Gm23391-201ENSMUST00000157579 104 ntBASIC3.4□□□□□ -1.87
Usp39Q3TIX9 Ear-ps8-201ENSMUST00000161935 354 ntBASIC3.4□□□□□ -1.87
Usp39Q3TIX9 Mir5129-201ENSMUST00000174938 78 ntBASIC3.4□□□□□ -1.87
Usp39Q3TIX9 Gm26195-201ENSMUST00000175035 101 ntBASIC3.4□□□□□ -1.87
Usp39Q3TIX9 Gm28010-201ENSMUST00000179485 126 ntBASIC3.4□□□□□ -1.87
Usp39Q3TIX9 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC3.4□□□□□ -1.87
Usp39Q3TIX9 Gm37431-201ENSMUST00000195102 111 ntBASIC3.4□□□□□ -1.87
Usp39Q3TIX9 Gm43583-201ENSMUST00000199235 303 ntBASIC3.4□□□□□ -1.87
Usp39Q3TIX9 Gm44355-201ENSMUST00000200417 104 ntBASIC3.4□□□□□ -1.87
Usp39Q3TIX9 Gm44076-201ENSMUST00000203072 520 ntBASIC3.4□□□□□ -1.87
Usp39Q3TIX9 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.4□□□□□ -1.87
Usp39Q3TIX9 Gm45513-201ENSMUST00000210228 376 ntBASIC3.4□□□□□ -1.87
Usp39Q3TIX9 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC3.4□□□□□ -1.87
Usp39Q3TIX9 AC123860.1-201ENSMUST00000228033 481 ntBASIC3.4□□□□□ -1.87
Usp39Q3TIX9 Gm22685-201ENSMUST00000082848 106 ntBASIC3.4□□□□□ -1.87
Usp39Q3TIX9 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Usp39Q3TIX9 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Usp39Q3TIX9 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Usp39Q3TIX9 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Usp39Q3TIX9 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Usp39Q3TIX9 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
Usp39Q3TIX9 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Usp39Q3TIX9 Gm37204-201ENSMUST00000192389 3961 ntBASIC3.39□□□□□ -1.87
Usp39Q3TIX9 AC158921.1-201ENSMUST00000227861 3468 ntBASIC3.39□□□□□ -1.87
Usp39Q3TIX9 Gm24121-201ENSMUST00000102029 106 ntBASIC3.39□□□□□ -1.87
Usp39Q3TIX9 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Usp39Q3TIX9 Gm24586-201ENSMUST00000116695 89 ntBASIC3.39□□□□□ -1.87
Usp39Q3TIX9 Gm11572-201ENSMUST00000119164 120 ntBASIC3.39□□□□□ -1.87
Usp39Q3TIX9 Gm14810-201ENSMUST00000121628 486 ntBASIC3.39□□□□□ -1.87
Usp39Q3TIX9 Gm25783-201ENSMUST00000122525 190 ntBASIC3.39□□□□□ -1.87
Usp39Q3TIX9 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.39□□□□□ -1.87
Usp39Q3TIX9 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC3.39□□□□□ -1.87
Usp39Q3TIX9 Gm23209-201ENSMUST00000158667 110 ntBASIC3.39□□□□□ -1.87
Usp39Q3TIX9 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC3.39□□□□□ -1.87
Usp39Q3TIX9 Gm29330-201ENSMUST00000190032 699 ntBASIC3.39□□□□□ -1.87
Usp39Q3TIX9 Gm37089-201ENSMUST00000195616 129 ntBASIC3.39□□□□□ -1.87
Usp39Q3TIX9 Gm9379-201ENSMUST00000196790 646 ntBASIC3.39□□□□□ -1.87
Usp39Q3TIX9 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC3.39□□□□□ -1.87
Usp39Q3TIX9 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC3.39□□□□□ -1.87
Usp39Q3TIX9 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.39□□□□□ -1.87
Usp39Q3TIX9 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC3.39□□□□□ -1.87
Usp39Q3TIX9 AC091783.5-201ENSMUST00000224928 671 ntBASIC3.39□□□□□ -1.87
Usp39Q3TIX9 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Usp39Q3TIX9 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Usp39Q3TIX9 Gm26457-201ENSMUST00000082678 78 ntBASIC3.39□□□□□ -1.87
Usp39Q3TIX9 Gm26066-201ENSMUST00000083385 109 ntBASIC3.39□□□□□ -1.87
Usp39Q3TIX9 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Usp39Q3TIX9 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Usp39Q3TIX9 Gm8935-202ENSMUST00000105727 1959 ntBASIC3.38□□□□□ -1.87
Usp39Q3TIX9 Gm21034-201ENSMUST00000207390 2608 ntBASIC3.38□□□□□ -1.87
Usp39Q3TIX9 Gm21035-201ENSMUST00000207867 2608 ntBASIC3.38□□□□□ -1.87
Usp39Q3TIX9 Gm26696-201ENSMUST00000181941 2848 ntBASIC3.38□□□□□ -1.87
Usp39Q3TIX9 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Usp39Q3TIX9 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Usp39Q3TIX9 Gm22590-201ENSMUST00000104247 128 ntBASIC3.38□□□□□ -1.87
Usp39Q3TIX9 Gm23532-201ENSMUST00000104569 112 ntBASIC3.38□□□□□ -1.87
Usp39Q3TIX9 Gm15029-201ENSMUST00000119742 199 ntBASIC3.38□□□□□ -1.87
Usp39Q3TIX9 Gm16005-201ENSMUST00000120515 269 ntBASIC3.38□□□□□ -1.87
Usp39Q3TIX9 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC3.38□□□□□ -1.87
Usp39Q3TIX9 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Usp39Q3TIX9 Gm26279-201ENSMUST00000157095 102 ntBASIC3.38□□□□□ -1.87
Usp39Q3TIX9 Gm25967-201ENSMUST00000157168 147 ntBASIC3.38□□□□□ -1.87
Usp39Q3TIX9 Gm25664-201ENSMUST00000157697 107 ntBASIC3.38□□□□□ -1.87
Usp39Q3TIX9 Gm23277-201ENSMUST00000157914 136 ntBASIC3.38□□□□□ -1.87
Usp39Q3TIX9 Gm22113-201ENSMUST00000158343 104 ntBASIC3.38□□□□□ -1.87
Usp39Q3TIX9 Gm16326-201ENSMUST00000162843 414 ntBASIC3.38□□□□□ -1.87
Usp39Q3TIX9 Gm3370-201ENSMUST00000171785 500 ntBASIC3.38□□□□□ -1.87
Usp39Q3TIX9 Gm25450-201ENSMUST00000179144 107 ntBASIC3.38□□□□□ -1.87
Usp39Q3TIX9 Mir6335-201ENSMUST00000184081 98 ntBASIC3.38□□□□□ -1.87
Usp39Q3TIX9 Gm27421-201ENSMUST00000184729 167 ntBASIC3.38□□□□□ -1.87
Usp39Q3TIX9 Gm27540-201ENSMUST00000184950 187 ntBASIC3.38□□□□□ -1.87
Usp39Q3TIX9 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.38□□□□□ -1.87
Usp39Q3TIX9 Gm18956-201ENSMUST00000192857 480 ntBASIC3.38□□□□□ -1.87
Usp39Q3TIX9 Igkv11-118-201ENSMUST00000199448 346 ntBASIC3.38□□□□□ -1.87
Usp39Q3TIX9 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC3.38□□□□□ -1.87
Usp39Q3TIX9 Mir471-201ENSMUST00000093596 67 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 88.2 ms