Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Gm12647-201ENSMUST00000118977 265 ntBASIC3.03□□□□□ -1.92
Col28a1Q2UY11 Gm22956-201ENSMUST00000122520 80 ntBASIC3.03□□□□□ -1.92
Col28a1Q2UY11 Gm22107-201ENSMUST00000122548 100 ntBASIC3.03□□□□□ -1.92
Col28a1Q2UY11 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC3.03□□□□□ -1.92
Col28a1Q2UY11 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC3.03□□□□□ -1.92
Col28a1Q2UY11 Gm25333-201ENSMUST00000158035 246 ntBASIC3.03□□□□□ -1.92
Col28a1Q2UY11 Gm17065-201ENSMUST00000165245 239 ntBASIC3.03□□□□□ -1.92
Col28a1Q2UY11 Gm26501-201ENSMUST00000178307 107 ntBASIC3.03□□□□□ -1.92
Col28a1Q2UY11 Gm27374-201ENSMUST00000183660 81 ntBASIC3.03□□□□□ -1.92
Col28a1Q2UY11 Gm27997-201ENSMUST00000184942 69 ntBASIC3.03□□□□□ -1.92
Col28a1Q2UY11 Gm37801-201ENSMUST00000194754 274 ntBASIC3.03□□□□□ -1.92
Col28a1Q2UY11 Gm44393-201ENSMUST00000197418 138 ntBASIC3.03□□□□□ -1.92
Col28a1Q2UY11 Gm20039-201ENSMUST00000210329 394 ntBASIC3.03□□□□□ -1.92
Col28a1Q2UY11 AC125374.2-201ENSMUST00000214278 162 ntBASIC3.03□□□□□ -1.92
Col28a1Q2UY11 Gm46194-201ENSMUST00000218136 320 ntBASIC3.03□□□□□ -1.92
Col28a1Q2UY11 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC3.03□□□□□ -1.92
Col28a1Q2UY11 AC130821.1-201ENSMUST00000221997 293 ntBASIC3.03□□□□□ -1.92
Col28a1Q2UY11 Gm22358-201ENSMUST00000082877 122 ntBASIC3.03□□□□□ -1.92
Col28a1Q2UY11 Gm25188-201ENSMUST00000083913 122 ntBASIC3.03□□□□□ -1.92
Col28a1Q2UY11 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Col28a1Q2UY11 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
Col28a1Q2UY11 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.93
Col28a1Q2UY11 Gm42909-201ENSMUST00000196982 3619 ntBASIC3.02□□□□□ -1.93
Col28a1Q2UY11 Mir19b-1-201ENSMUST00000102301 87 ntBASIC3.02□□□□□ -1.93
Col28a1Q2UY11 Gm26147-201ENSMUST00000104479 114 ntBASIC3.02□□□□□ -1.93
Col28a1Q2UY11 Gm14652-201ENSMUST00000118479 235 ntBASIC3.02□□□□□ -1.93
Col28a1Q2UY11 Gm13967-201ENSMUST00000120404 380 ntBASIC3.02□□□□□ -1.93
Col28a1Q2UY11 Gm15244-201ENSMUST00000121122 130 ntBASIC3.02□□□□□ -1.93
Col28a1Q2UY11 Gm6265-201ENSMUST00000149263 231 ntBASIC3.02□□□□□ -1.93
Col28a1Q2UY11 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC3.02□□□□□ -1.93
Col28a1Q2UY11 Gm27926-201ENSMUST00000157180 66 ntBASIC3.02□□□□□ -1.93
Col28a1Q2UY11 Gm22961-201ENSMUST00000157964 106 ntBASIC3.02□□□□□ -1.93
Col28a1Q2UY11 Gm23759-201ENSMUST00000158351 268 ntBASIC3.02□□□□□ -1.93
Col28a1Q2UY11 Gm25486-201ENSMUST00000158726 63 ntBASIC3.02□□□□□ -1.93
Col28a1Q2UY11 Gm24085-201ENSMUST00000175172 116 ntBASIC3.02□□□□□ -1.93
Col28a1Q2UY11 Gm25749-201ENSMUST00000175485 111 ntBASIC3.02□□□□□ -1.93
Col28a1Q2UY11 Gm20630-201ENSMUST00000177387 551 ntBASIC3.02□□□□□ -1.93
Col28a1Q2UY11 Gm24862-201ENSMUST00000179103 79 ntBASIC3.02□□□□□ -1.93
Col28a1Q2UY11 Gm23310-201ENSMUST00000179105 79 ntBASIC3.02□□□□□ -1.93
Col28a1Q2UY11 Gm25461-201ENSMUST00000179293 79 ntBASIC3.02□□□□□ -1.93
Col28a1Q2UY11 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Col28a1Q2UY11 Gm26585-201ENSMUST00000180890 630 ntBASIC3.02□□□□□ -1.93
Col28a1Q2UY11 Gm6651-201ENSMUST00000189471 271 ntBASIC3.02□□□□□ -1.93
Col28a1Q2UY11 Gm38060-201ENSMUST00000194822 464 ntBASIC3.02□□□□□ -1.93
Col28a1Q2UY11 Gm37431-201ENSMUST00000195102 111 ntBASIC3.02□□□□□ -1.93
Col28a1Q2UY11 Gm44446-201ENSMUST00000204864 255 ntBASIC3.02□□□□□ -1.93
Col28a1Q2UY11 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC3.02□□□□□ -1.93
Col28a1Q2UY11 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Col28a1Q2UY11 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC3.02□□□□□ -1.93
Col28a1Q2UY11 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC3.02□□□□□ -1.93
Col28a1Q2UY11 Gm10088-201ENSMUST00000074116 423 ntBASIC3.02□□□□□ -1.93
Col28a1Q2UY11 Gm8074-201ENSMUST00000095071 252 ntBASIC3.02□□□□□ -1.93
Col28a1Q2UY11 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Col28a1Q2UY11 Gm14910-201ENSMUST00000121037 1805 ntBASIC3.02□□□□□ -1.93
Col28a1Q2UY11 Gm37515-201ENSMUST00000193321 3817 ntBASIC3.02□□□□□ -1.93
Col28a1Q2UY11 Gm44821-201ENSMUST00000208212 2002 ntBASIC3.02□□□□□ -1.93
Col28a1Q2UY11 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
Col28a1Q2UY11 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
Col28a1Q2UY11 Gm7853-201ENSMUST00000100708 478 ntBASIC3.01□□□□□ -1.93
Col28a1Q2UY11 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC3.01□□□□□ -1.93
Col28a1Q2UY11 Gm25539-201ENSMUST00000116886 122 ntBASIC3.01□□□□□ -1.93
Col28a1Q2UY11 Gm14940-201ENSMUST00000119309 495 ntBASIC3.01□□□□□ -1.93
Col28a1Q2UY11 Gm12640-201ENSMUST00000120097 310 ntBASIC3.01□□□□□ -1.93
Col28a1Q2UY11 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC3.01□□□□□ -1.93
Col28a1Q2UY11 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
Col28a1Q2UY11 Gm22814-201ENSMUST00000157452 104 ntBASIC3.01□□□□□ -1.93
Col28a1Q2UY11 Ear-ps4-201ENSMUST00000166834 450 ntBASIC3.01□□□□□ -1.93
Col28a1Q2UY11 Gm20698-201ENSMUST00000175657 233 ntBASIC3.01□□□□□ -1.93
Col28a1Q2UY11 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Col28a1Q2UY11 Gm27608-201ENSMUST00000184822 162 ntBASIC3.01□□□□□ -1.93
Col28a1Q2UY11 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC3.01□□□□□ -1.93
Col28a1Q2UY11 Gm28288-201ENSMUST00000191019 214 ntBASIC3.01□□□□□ -1.93
Col28a1Q2UY11 Gm8242-202ENSMUST00000193056 475 ntBASIC3.01□□□□□ -1.93
Col28a1Q2UY11 Gm34073-201ENSMUST00000195736 212 ntBASIC3.01□□□□□ -1.93
Col28a1Q2UY11 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC3.01□□□□□ -1.93
Col28a1Q2UY11 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC3.01□□□□□ -1.93
Col28a1Q2UY11 Gm44594-201ENSMUST00000208982 407 ntBASIC3.01□□□□□ -1.93
Col28a1Q2UY11 Gm46233-201ENSMUST00000217831 449 ntBASIC3.01□□□□□ -1.93
Col28a1Q2UY11 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC3.01□□□□□ -1.93
Col28a1Q2UY11 AC126440.1-201ENSMUST00000227098 349 ntBASIC3.01□□□□□ -1.93
Col28a1Q2UY11 Gm9818-201ENSMUST00000050900 255 ntBASIC3.01□□□□□ -1.93
Col28a1Q2UY11 Gm25202-201ENSMUST00000082838 191 ntBASIC3.01□□□□□ -1.93
Col28a1Q2UY11 Gm26497-201ENSMUST00000083146 107 ntBASIC3.01□□□□□ -1.93
Col28a1Q2UY11 Gm22974-201ENSMUST00000083301 103 ntBASIC3.01□□□□□ -1.93
Col28a1Q2UY11 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
Col28a1Q2UY11 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC3.01□□□□□ -1.93
Col28a1Q2UY11 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
Col28a1Q2UY11 Gm24096-201ENSMUST00000103905 110 ntBASIC3□□□□□ -1.93
Col28a1Q2UY11 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC3□□□□□ -1.93
Col28a1Q2UY11 Gm13443-201ENSMUST00000120770 555 ntBASIC3□□□□□ -1.93
Col28a1Q2UY11 Gm13903-201ENSMUST00000120945 193 ntBASIC3□□□□□ -1.93
Col28a1Q2UY11 Gm23183-201ENSMUST00000122595 323 ntBASIC3□□□□□ -1.93
Col28a1Q2UY11 Gm26477-201ENSMUST00000122617 323 ntBASIC3□□□□□ -1.93
Col28a1Q2UY11 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC3□□□□□ -1.93
Col28a1Q2UY11 Gm26100-201ENSMUST00000157245 127 ntBASIC3□□□□□ -1.93
Col28a1Q2UY11 Gm24061-201ENSMUST00000157489 120 ntBASIC3□□□□□ -1.93
Col28a1Q2UY11 Gm22389-201ENSMUST00000158193 301 ntBASIC3□□□□□ -1.93
Col28a1Q2UY11 Mir6346-201ENSMUST00000183982 81 ntBASIC3□□□□□ -1.93
Col28a1Q2UY11 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC3□□□□□ -1.93
Col28a1Q2UY11 Gm37085-201ENSMUST00000193780 196 ntBASIC3□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms