Protein–RNA interactions for Protein: Q1W617

Shroom4, Protein Shroom4, mousemouse

Predictions only

Length 1,475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom4Q1W617 AC123533.1-201ENSMUST00000227782 446 ntBASIC3.8□□□□□ -1.8
Shroom4Q1W617 Gm22572-201ENSMUST00000082985 105 ntBASIC3.8□□□□□ -1.8
Shroom4Q1W617 Gm23677-201ENSMUST00000083156 104 ntBASIC3.8□□□□□ -1.8
Shroom4Q1W617 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Shroom4Q1W617 Snord14c-201ENSMUST00000101927 86 ntBASIC3.79□□□□□ -1.8
Shroom4Q1W617 Gm14163-201ENSMUST00000117342 217 ntBASIC3.79□□□□□ -1.8
Shroom4Q1W617 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC3.79□□□□□ -1.8
Shroom4Q1W617 Gm24750-201ENSMUST00000157843 104 ntBASIC3.79□□□□□ -1.8
Shroom4Q1W617 Gm25643-201ENSMUST00000158874 103 ntBASIC3.79□□□□□ -1.8
Shroom4Q1W617 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Shroom4Q1W617 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC3.79□□□□□ -1.8
Shroom4Q1W617 Gm27535-201ENSMUST00000183814 157 ntBASIC3.79□□□□□ -1.8
Shroom4Q1W617 Mir6363-201ENSMUST00000184880 114 ntBASIC3.79□□□□□ -1.8
Shroom4Q1W617 Gm44083-201ENSMUST00000203114 337 ntBASIC3.79□□□□□ -1.8
Shroom4Q1W617 Gm45049-201ENSMUST00000207586 591 ntBASIC3.79□□□□□ -1.8
Shroom4Q1W617 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC3.79□□□□□ -1.8
Shroom4Q1W617 AC164567.2-201ENSMUST00000219363 445 ntBASIC3.79□□□□□ -1.8
Shroom4Q1W617 AC161758.1-201ENSMUST00000226123 310 ntBASIC3.79□□□□□ -1.8
Shroom4Q1W617 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Shroom4Q1W617 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
Shroom4Q1W617 Gm3623-201ENSMUST00000173643 2747 ntBASIC3.79□□□□□ -1.8
Shroom4Q1W617 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Shroom4Q1W617 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
Shroom4Q1W617 Gm12941-201ENSMUST00000117934 220 ntBASIC3.79□□□□□ -1.8
Shroom4Q1W617 Gm15195-201ENSMUST00000118775 263 ntBASIC3.79□□□□□ -1.8
Shroom4Q1W617 Gm23124-201ENSMUST00000157650 107 ntBASIC3.79□□□□□ -1.8
Shroom4Q1W617 Gm22192-201ENSMUST00000175128 85 ntBASIC3.79□□□□□ -1.8
Shroom4Q1W617 Snora15-201ENSMUST00000177461 131 ntBASIC3.79□□□□□ -1.8
Shroom4Q1W617 Gm22259-201ENSMUST00000178926 107 ntBASIC3.79□□□□□ -1.8
Shroom4Q1W617 Gm23648-201ENSMUST00000180301 107 ntBASIC3.79□□□□□ -1.8
Shroom4Q1W617 Gm44408-201ENSMUST00000200205 66 ntBASIC3.79□□□□□ -1.8
Shroom4Q1W617 Mir7227-201ENSMUST00000200408 59 ntBASIC3.79□□□□□ -1.8
Shroom4Q1W617 Gm44634-201ENSMUST00000206119 152 ntBASIC3.79□□□□□ -1.8
Shroom4Q1W617 Gm45439-201ENSMUST00000211723 359 ntBASIC3.79□□□□□ -1.8
Shroom4Q1W617 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC3.79□□□□□ -1.8
Shroom4Q1W617 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC3.79□□□□□ -1.8
Shroom4Q1W617 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Shroom4Q1W617 Gm26447-201ENSMUST00000082448 129 ntBASIC3.79□□□□□ -1.8
Shroom4Q1W617 Gm22806-201ENSMUST00000082738 136 ntBASIC3.79□□□□□ -1.8
Shroom4Q1W617 Gm23506-201ENSMUST00000083077 107 ntBASIC3.79□□□□□ -1.8
Shroom4Q1W617 Gm25632-201ENSMUST00000083112 85 ntBASIC3.79□□□□□ -1.8
Shroom4Q1W617 Gm22973-201ENSMUST00000083298 191 ntBASIC3.79□□□□□ -1.8
Shroom4Q1W617 Gm23451-201ENSMUST00000083328 122 ntBASIC3.79□□□□□ -1.8
Shroom4Q1W617 Gm25579-201ENSMUST00000083407 106 ntBASIC3.79□□□□□ -1.8
Shroom4Q1W617 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Shroom4Q1W617 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Shroom4Q1W617 Gm21032-201ENSMUST00000208108 2578 ntBASIC3.78□□□□□ -1.8
Shroom4Q1W617 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC3.78□□□□□ -1.8
Shroom4Q1W617 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Shroom4Q1W617 Gm12230-201ENSMUST00000118301 454 ntBASIC3.78□□□□□ -1.8
Shroom4Q1W617 Gm12448-201ENSMUST00000118852 655 ntBASIC3.78□□□□□ -1.8
Shroom4Q1W617 Gm15223-201ENSMUST00000120989 826 ntBASIC3.78□□□□□ -1.8
Shroom4Q1W617 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC3.78□□□□□ -1.8
Shroom4Q1W617 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC3.78□□□□□ -1.8
Shroom4Q1W617 Gm25341-201ENSMUST00000157461 268 ntBASIC3.78□□□□□ -1.8
Shroom4Q1W617 Gm23191-201ENSMUST00000179147 107 ntBASIC3.78□□□□□ -1.8
Shroom4Q1W617 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Shroom4Q1W617 Gm36954-201ENSMUST00000195362 363 ntBASIC3.78□□□□□ -1.8
Shroom4Q1W617 Gm43540-201ENSMUST00000196320 3848 ntBASIC3.78□□□□□ -1.8
Shroom4Q1W617 Gm45742-201ENSMUST00000212400 433 ntBASIC3.78□□□□□ -1.8
Shroom4Q1W617 AC153646.2-201ENSMUST00000220516 109 ntBASIC3.78□□□□□ -1.8
Shroom4Q1W617 CT485612.2-201ENSMUST00000223014 151 ntBASIC3.78□□□□□ -1.8
Shroom4Q1W617 AC133156.1-202ENSMUST00000227284 363 ntBASIC3.78□□□□□ -1.8
Shroom4Q1W617 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.78□□□□□ -1.8
Shroom4Q1W617 Gm25482-201ENSMUST00000083225 107 ntBASIC3.78□□□□□ -1.8
Shroom4Q1W617 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.81
Shroom4Q1W617 Gm43718-201ENSMUST00000197524 1857 ntBASIC3.77□□□□□ -1.81
Shroom4Q1W617 Gm22834-201ENSMUST00000102021 79 ntBASIC3.77□□□□□ -1.81
Shroom4Q1W617 Mir147-201ENSMUST00000102354 79 ntBASIC3.77□□□□□ -1.81
Shroom4Q1W617 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Shroom4Q1W617 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC3.77□□□□□ -1.81
Shroom4Q1W617 Gm11253-201ENSMUST00000118486 201 ntBASIC3.77□□□□□ -1.81
Shroom4Q1W617 Gm12053-201ENSMUST00000119022 252 ntBASIC3.77□□□□□ -1.81
Shroom4Q1W617 Gm15147-201ENSMUST00000122263 483 ntBASIC3.77□□□□□ -1.81
Shroom4Q1W617 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC3.77□□□□□ -1.81
Shroom4Q1W617 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Shroom4Q1W617 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Shroom4Q1W617 Gm27928-201ENSMUST00000183747 256 ntBASIC3.77□□□□□ -1.81
Shroom4Q1W617 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC3.77□□□□□ -1.81
Shroom4Q1W617 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Shroom4Q1W617 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Shroom4Q1W617 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Shroom4Q1W617 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC3.77□□□□□ -1.81
Shroom4Q1W617 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Shroom4Q1W617 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Shroom4Q1W617 Gm11890-201ENSMUST00000119585 417 ntBASIC3.76□□□□□ -1.81
Shroom4Q1W617 Gm26412-201ENSMUST00000157666 55 ntBASIC3.76□□□□□ -1.81
Shroom4Q1W617 Gm25194-201ENSMUST00000177987 79 ntBASIC3.76□□□□□ -1.81
Shroom4Q1W617 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Shroom4Q1W617 Gm24306-201ENSMUST00000180229 79 ntBASIC3.76□□□□□ -1.81
Shroom4Q1W617 Gm28399-201ENSMUST00000186221 318 ntBASIC3.76□□□□□ -1.81
Shroom4Q1W617 Gm28572-201ENSMUST00000187444 318 ntBASIC3.76□□□□□ -1.81
Shroom4Q1W617 Gm29524-201ENSMUST00000190819 699 ntBASIC3.76□□□□□ -1.81
Shroom4Q1W617 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC3.76□□□□□ -1.81
Shroom4Q1W617 Gm18453-201ENSMUST00000208000 626 ntBASIC3.76□□□□□ -1.81
Shroom4Q1W617 Gm45616-201ENSMUST00000211711 319 ntBASIC3.76□□□□□ -1.81
Shroom4Q1W617 AL450317.1-201ENSMUST00000213941 291 ntBASIC3.76□□□□□ -1.81
Shroom4Q1W617 AC129308.2-201ENSMUST00000224588 789 ntBASIC3.76□□□□□ -1.81
Shroom4Q1W617 AC124400.1-201ENSMUST00000225779 193 ntBASIC3.76□□□□□ -1.81
Shroom4Q1W617 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 110.4 ms