Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm23848-201ENSMUST00000083826 106 ntBASIC1.43□□□□□ -2.18
Nkx3-1P97436 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
Nkx3-1P97436 Gm22591-201ENSMUST00000104243 106 ntBASIC1.42□□□□□ -2.18
Nkx3-1P97436 Mir190b-201ENSMUST00000104803 80 ntBASIC1.42□□□□□ -2.18
Nkx3-1P97436 Gm15029-201ENSMUST00000119742 199 ntBASIC1.42□□□□□ -2.18
Nkx3-1P97436 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC1.42□□□□□ -2.18
Nkx3-1P97436 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC1.42□□□□□ -2.18
Nkx3-1P97436 Gm25621-201ENSMUST00000157223 114 ntBASIC1.42□□□□□ -2.18
Nkx3-1P97436 Gm22603-201ENSMUST00000157603 96 ntBASIC1.42□□□□□ -2.18
Nkx3-1P97436 Gm24439-201ENSMUST00000157894 117 ntBASIC1.42□□□□□ -2.18
Nkx3-1P97436 Gm24962-201ENSMUST00000157917 109 ntBASIC1.42□□□□□ -2.18
Nkx3-1P97436 Gm26173-201ENSMUST00000158416 136 ntBASIC1.42□□□□□ -2.18
Nkx3-1P97436 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC1.42□□□□□ -2.18
Nkx3-1P97436 Gm16588-201ENSMUST00000162889 355 ntBASIC1.42□□□□□ -2.18
Nkx3-1P97436 Mir5101-201ENSMUST00000175181 83 ntBASIC1.42□□□□□ -2.18
Nkx3-1P97436 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
Nkx3-1P97436 Gm27659-201ENSMUST00000183472 98 ntBASIC1.42□□□□□ -2.18
Nkx3-1P97436 Mir6335-201ENSMUST00000184081 98 ntBASIC1.42□□□□□ -2.18
Nkx3-1P97436 Gm28794-201ENSMUST00000185276 136 ntBASIC1.42□□□□□ -2.18
Nkx3-1P97436 Gm20058-201ENSMUST00000186939 284 ntBASIC1.42□□□□□ -2.18
Nkx3-1P97436 Gm10193-201ENSMUST00000188288 231 ntBASIC1.42□□□□□ -2.18
Nkx3-1P97436 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC1.42□□□□□ -2.18
Nkx3-1P97436 AC154296.1-201ENSMUST00000198150 67 ntBASIC1.42□□□□□ -2.18
Nkx3-1P97436 Gm43810-201ENSMUST00000201018 232 ntBASIC1.42□□□□□ -2.18
Nkx3-1P97436 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC1.42□□□□□ -2.18
Nkx3-1P97436 AC239878.2-201ENSMUST00000224048 464 ntBASIC1.42□□□□□ -2.18
Nkx3-1P97436 AC138667.2-201ENSMUST00000224880 598 ntBASIC1.42□□□□□ -2.18
Nkx3-1P97436 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
Nkx3-1P97436 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
Nkx3-1P97436 Gm22508-201ENSMUST00000082772 110 ntBASIC1.42□□□□□ -2.18
Nkx3-1P97436 Gm23727-201ENSMUST00000083352 164 ntBASIC1.42□□□□□ -2.18
Nkx3-1P97436 Gm23741-201ENSMUST00000097237 171 ntBASIC1.42□□□□□ -2.18
Nkx3-1P97436 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Nkx3-1P97436 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Nkx3-1P97436 Gm24430-201ENSMUST00000104077 104 ntBASIC1.41□□□□□ -2.18
Nkx3-1P97436 Gm23744-201ENSMUST00000104231 149 ntBASIC1.41□□□□□ -2.18
Nkx3-1P97436 Gm14629-201ENSMUST00000122428 144 ntBASIC1.41□□□□□ -2.18
Nkx3-1P97436 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC1.41□□□□□ -2.18
Nkx3-1P97436 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC1.41□□□□□ -2.18
Nkx3-1P97436 Gm26181-201ENSMUST00000157687 106 ntBASIC1.41□□□□□ -2.18
Nkx3-1P97436 Gm25888-201ENSMUST00000157778 302 ntBASIC1.41□□□□□ -2.18
Nkx3-1P97436 Gm22386-201ENSMUST00000158192 129 ntBASIC1.41□□□□□ -2.18
Nkx3-1P97436 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC1.41□□□□□ -2.18
Nkx3-1P97436 Gm18416-201ENSMUST00000175635 1003 ntBASIC1.41□□□□□ -2.18
Nkx3-1P97436 Gm23568-201ENSMUST00000177960 92 ntBASIC1.41□□□□□ -2.18
Nkx3-1P97436 Gm24829-201ENSMUST00000179245 92 ntBASIC1.41□□□□□ -2.18
Nkx3-1P97436 Gm24464-201ENSMUST00000179697 107 ntBASIC1.41□□□□□ -2.18
Nkx3-1P97436 Snord116l14-201ENSMUST00000179875 94 ntBASIC1.41□□□□□ -2.18
Nkx3-1P97436 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC1.41□□□□□ -2.18
Nkx3-1P97436 Gm28383-201ENSMUST00000187563 139 ntBASIC1.41□□□□□ -2.18
Nkx3-1P97436 Gm29262-201ENSMUST00000190084 196 ntBASIC1.41□□□□□ -2.18
Nkx3-1P97436 Gm19123-201ENSMUST00000190716 651 ntBASIC1.41□□□□□ -2.18
Nkx3-1P97436 Gm38280-201ENSMUST00000192610 158 ntBASIC1.41□□□□□ -2.18
Nkx3-1P97436 Gm23370-202ENSMUST00000197008 129 ntBASIC1.41□□□□□ -2.18
Nkx3-1P97436 Gm43171-201ENSMUST00000199882 291 ntBASIC1.41□□□□□ -2.18
Nkx3-1P97436 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Nkx3-1P97436 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC1.41□□□□□ -2.18
Nkx3-1P97436 Gm25404-201ENSMUST00000082970 107 ntBASIC1.41□□□□□ -2.18
Nkx3-1P97436 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Nkx3-1P97436 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC1.41□□□□□ -2.18
Nkx3-1P97436 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Nkx3-1P97436 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
Nkx3-1P97436 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC1.4□□□□□ -2.19
Nkx3-1P97436 Mir873a-201ENSMUST00000104863 77 ntBASIC1.4□□□□□ -2.19
Nkx3-1P97436 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC1.4□□□□□ -2.19
Nkx3-1P97436 Gm14558-201ENSMUST00000117458 381 ntBASIC1.4□□□□□ -2.19
Nkx3-1P97436 Gm12191-201ENSMUST00000118307 348 ntBASIC1.4□□□□□ -2.19
Nkx3-1P97436 Gm9703-201ENSMUST00000119573 343 ntBASIC1.4□□□□□ -2.19
Nkx3-1P97436 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC1.4□□□□□ -2.19
Nkx3-1P97436 Gm16411-201ENSMUST00000122164 1100 ntBASIC1.4□□□□□ -2.19
Nkx3-1P97436 Gm25109-201ENSMUST00000122474 114 ntBASIC1.4□□□□□ -2.19
Nkx3-1P97436 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC1.4□□□□□ -2.19
Nkx3-1P97436 Gm23956-201ENSMUST00000157211 119 ntBASIC1.4□□□□□ -2.19
Nkx3-1P97436 Gm24908-201ENSMUST00000157294 127 ntBASIC1.4□□□□□ -2.19
Nkx3-1P97436 Gm24716-201ENSMUST00000157524 104 ntBASIC1.4□□□□□ -2.19
Nkx3-1P97436 Gm23137-201ENSMUST00000157559 107 ntBASIC1.4□□□□□ -2.19
Nkx3-1P97436 Gm18396-201ENSMUST00000177095 361 ntBASIC1.4□□□□□ -2.19
Nkx3-1P97436 Gm21885-201ENSMUST00000178891 327 ntBASIC1.4□□□□□ -2.19
Nkx3-1P97436 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.19
Nkx3-1P97436 Gm5329-201ENSMUST00000186898 463 ntBASIC1.4□□□□□ -2.19
Nkx3-1P97436 Gm29216-201ENSMUST00000187117 492 ntBASIC1.4□□□□□ -2.19
Nkx3-1P97436 Gm5116-201ENSMUST00000187732 463 ntBASIC1.4□□□□□ -2.19
Nkx3-1P97436 Gm29627-201ENSMUST00000187984 463 ntBASIC1.4□□□□□ -2.19
Nkx3-1P97436 Gm37599-201ENSMUST00000193067 489 ntBASIC1.4□□□□□ -2.19
Nkx3-1P97436 Gm43286-201ENSMUST00000197420 424 ntBASIC1.4□□□□□ -2.19
Nkx3-1P97436 Igkv1-108-201ENSMUST00000198926 298 ntBASIC1.4□□□□□ -2.19
Nkx3-1P97436 Gm29848-201ENSMUST00000203107 295 ntBASIC1.4□□□□□ -2.19
Nkx3-1P97436 Gm45387-201ENSMUST00000209792 632 ntBASIC1.4□□□□□ -2.19
Nkx3-1P97436 AC130222.1-201ENSMUST00000221198 256 ntBASIC1.4□□□□□ -2.19
Nkx3-1P97436 AC123656.2-201ENSMUST00000226726 227 ntBASIC1.4□□□□□ -2.19
Nkx3-1P97436 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC1.4□□□□□ -2.19
Nkx3-1P97436 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
Nkx3-1P97436 Gm24921-201ENSMUST00000083024 107 ntBASIC1.4□□□□□ -2.19
Nkx3-1P97436 Mir320-201ENSMUST00000083594 82 ntBASIC1.4□□□□□ -2.19
Nkx3-1P97436 Gm26327-201ENSMUST00000093724 111 ntBASIC1.4□□□□□ -2.19
Nkx3-1P97436 Gm22496-201ENSMUST00000104493 88 ntBASIC1.39□□□□□ -2.19
Nkx3-1P97436 Gm15659-201ENSMUST00000118881 341 ntBASIC1.39□□□□□ -2.19
Nkx3-1P97436 Gm15115-201ENSMUST00000121145 264 ntBASIC1.39□□□□□ -2.19
Nkx3-1P97436 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC1.39□□□□□ -2.19
Nkx3-1P97436 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC1.39□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 88.1 ms