Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm15497-201ENSMUST00000119137 551 ntBASIC2.15□□□□□ -2.07
Sox3P53784 Gm15162-201ENSMUST00000119325 283 ntBASIC2.15□□□□□ -2.07
Sox3P53784 Gm11410-201ENSMUST00000120053 1143 ntBASIC2.15□□□□□ -2.07
Sox3P53784 Gm13720-201ENSMUST00000120741 196 ntBASIC2.15□□□□□ -2.07
Sox3P53784 Gm13862-201ENSMUST00000121220 197 ntBASIC2.15□□□□□ -2.07
Sox3P53784 Gm15077-201ENSMUST00000122344 362 ntBASIC2.15□□□□□ -2.07
Sox3P53784 Gm23212-201ENSMUST00000122718 60 ntBASIC2.15□□□□□ -2.07
Sox3P53784 Gm26280-201ENSMUST00000157096 101 ntBASIC2.15□□□□□ -2.07
Sox3P53784 Gm26004-201ENSMUST00000158804 116 ntBASIC2.15□□□□□ -2.07
Sox3P53784 Gm25836-201ENSMUST00000158918 123 ntBASIC2.15□□□□□ -2.07
Sox3P53784 Ear-ps4-201ENSMUST00000166834 450 ntBASIC2.15□□□□□ -2.07
Sox3P53784 Gm20543-201ENSMUST00000174200 726 ntBASIC2.15□□□□□ -2.07
Sox3P53784 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC2.15□□□□□ -2.07
Sox3P53784 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC2.15□□□□□ -2.07
Sox3P53784 Gm6801-201ENSMUST00000190697 339 ntBASIC2.15□□□□□ -2.07
Sox3P53784 Gm18296-201ENSMUST00000192475 783 ntBASIC2.15□□□□□ -2.07
Sox3P53784 Igkv13-64-201ENSMUST00000198143 343 ntBASIC2.15□□□□□ -2.07
Sox3P53784 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC2.15□□□□□ -2.07
Sox3P53784 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.15□□□□□ -2.07
Sox3P53784 AC239878.2-201ENSMUST00000224048 464 ntBASIC2.15□□□□□ -2.07
Sox3P53784 AC160962.2-201ENSMUST00000224761 632 ntBASIC2.15□□□□□ -2.07
Sox3P53784 AC183092.2-201ENSMUST00000225542 1153 ntBASIC2.15□□□□□ -2.07
Sox3P53784 AC139350.4-201ENSMUST00000228483 798 ntBASIC2.15□□□□□ -2.07
Sox3P53784 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Sox3P53784 Gm25586-201ENSMUST00000082499 112 ntBASIC2.15□□□□□ -2.07
Sox3P53784 Gm24268-201ENSMUST00000082990 110 ntBASIC2.15□□□□□ -2.07
Sox3P53784 Snora33-201ENSMUST00000093556 129 ntBASIC2.15□□□□□ -2.07
Sox3P53784 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Sox3P53784 Gm14602-201ENSMUST00000118625 340 ntBASIC2.14□□□□□ -2.07
Sox3P53784 Gm12748-201ENSMUST00000120763 504 ntBASIC2.14□□□□□ -2.07
Sox3P53784 Gm26393-201ENSMUST00000157625 129 ntBASIC2.14□□□□□ -2.07
Sox3P53784 Gm22166-201ENSMUST00000178419 121 ntBASIC2.14□□□□□ -2.07
Sox3P53784 Gm8532-201ENSMUST00000179174 461 ntBASIC2.14□□□□□ -2.07
Sox3P53784 Gm23288-201ENSMUST00000179213 121 ntBASIC2.14□□□□□ -2.07
Sox3P53784 Trbv22-201ENSMUST00000191697 291 ntBASIC2.14□□□□□ -2.07
Sox3P53784 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.14□□□□□ -2.07
Sox3P53784 Gm43286-201ENSMUST00000197420 424 ntBASIC2.14□□□□□ -2.07
Sox3P53784 Gm15235-201ENSMUST00000200572 194 ntBASIC2.14□□□□□ -2.07
Sox3P53784 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC2.14□□□□□ -2.07
Sox3P53784 Gm8940-201ENSMUST00000212585 219 ntBASIC2.14□□□□□ -2.07
Sox3P53784 Gm35558-203ENSMUST00000222264 204 ntBASIC2.14□□□□□ -2.07
Sox3P53784 AC114916.1-201ENSMUST00000228465 494 ntBASIC2.14□□□□□ -2.07
Sox3P53784 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Sox3P53784 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC2.14□□□□□ -2.07
Sox3P53784 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Sox3P53784 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
Sox3P53784 Gm26166-201ENSMUST00000083788 107 ntBASIC2.14□□□□□ -2.07
Sox3P53784 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
Sox3P53784 Gm37941-201ENSMUST00000192170 2309 ntBASIC2.13□□□□□ -2.07
Sox3P53784 Gm24889-201ENSMUST00000104388 132 ntBASIC2.13□□□□□ -2.07
Sox3P53784 Gm13602-201ENSMUST00000122405 493 ntBASIC2.13□□□□□ -2.07
Sox3P53784 Gm23429-201ENSMUST00000122486 149 ntBASIC2.13□□□□□ -2.07
Sox3P53784 Gm25052-201ENSMUST00000122661 158 ntBASIC2.13□□□□□ -2.07
Sox3P53784 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC2.13□□□□□ -2.07
Sox3P53784 Gm24769-201ENSMUST00000158506 129 ntBASIC2.13□□□□□ -2.07
Sox3P53784 Gm15914-201ENSMUST00000161922 309 ntBASIC2.13□□□□□ -2.07
Sox3P53784 Gm23714-201ENSMUST00000179259 105 ntBASIC2.13□□□□□ -2.07
Sox3P53784 Gm20058-201ENSMUST00000186939 284 ntBASIC2.13□□□□□ -2.07
Sox3P53784 Gm37869-201ENSMUST00000193385 595 ntBASIC2.13□□□□□ -2.07
Sox3P53784 Gm32175-201ENSMUST00000193641 346 ntBASIC2.13□□□□□ -2.07
Sox3P53784 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC2.13□□□□□ -2.07
Sox3P53784 Gm44459-201ENSMUST00000203926 160 ntBASIC2.13□□□□□ -2.07
Sox3P53784 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC2.13□□□□□ -2.07
Sox3P53784 AC154271.1-201ENSMUST00000224780 383 ntBASIC2.13□□□□□ -2.07
Sox3P53784 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Sox3P53784 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Sox3P53784 Gm23249-201ENSMUST00000083369 161 ntBASIC2.13□□□□□ -2.07
Sox3P53784 Gm22723-201ENSMUST00000083820 129 ntBASIC2.13□□□□□ -2.07
Sox3P53784 Gm26327-201ENSMUST00000093724 111 ntBASIC2.13□□□□□ -2.07
Sox3P53784 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Sox3P53784 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Sox3P53784 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Sox3P53784 Gm25068-201ENSMUST00000103895 110 ntBASIC2.12□□□□□ -2.07
Sox3P53784 n-R5s202-201ENSMUST00000104517 114 ntBASIC2.12□□□□□ -2.07
Sox3P53784 Gm26256-201ENSMUST00000122499 186 ntBASIC2.12□□□□□ -2.07
Sox3P53784 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.12□□□□□ -2.07
Sox3P53784 Gm22083-201ENSMUST00000157586 102 ntBASIC2.12□□□□□ -2.07
Sox3P53784 Gm25910-201ENSMUST00000157620 140 ntBASIC2.12□□□□□ -2.07
Sox3P53784 Gm23124-201ENSMUST00000157650 107 ntBASIC2.12□□□□□ -2.07
Sox3P53784 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Sox3P53784 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Sox3P53784 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Sox3P53784 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Sox3P53784 Gm10400-201ENSMUST00000203920 3835 ntBASIC2.12□□□□□ -2.07
Sox3P53784 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Sox3P53784 CT025606.1-201ENSMUST00000218273 324 ntBASIC2.12□□□□□ -2.07
Sox3P53784 AC116589.9-201ENSMUST00000221462 908 ntBASIC2.12□□□□□ -2.07
Sox3P53784 Gm7065-201ENSMUST00000222150 474 ntBASIC2.12□□□□□ -2.07
Sox3P53784 AC135292.1-201ENSMUST00000227665 204 ntBASIC2.12□□□□□ -2.07
Sox3P53784 Gm22443-201ENSMUST00000082890 107 ntBASIC2.12□□□□□ -2.07
Sox3P53784 Snord14d-201ENSMUST00000083424 86 ntBASIC2.12□□□□□ -2.07
Sox3P53784 Gm26108-201ENSMUST00000083973 191 ntBASIC2.12□□□□□ -2.07
Sox3P53784 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
Sox3P53784 Gm5596-201ENSMUST00000207988 2421 ntBASIC2.11□□□□□ -2.07
Sox3P53784 Gm22713-201ENSMUST00000116895 130 ntBASIC2.11□□□□□ -2.07
Sox3P53784 Gm13355-201ENSMUST00000117996 317 ntBASIC2.11□□□□□ -2.07
Sox3P53784 Gm15844-201ENSMUST00000118016 576 ntBASIC2.11□□□□□ -2.07
Sox3P53784 Gm24394-201ENSMUST00000158141 123 ntBASIC2.11□□□□□ -2.07
Sox3P53784 Gm23862-201ENSMUST00000180342 94 ntBASIC2.11□□□□□ -2.07
Sox3P53784 Gm28356-202ENSMUST00000187566 858 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms