Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Mir6914-201ENSMUST00000184999 69 ntBASIC3.71□□□□□ -1.82
Usp4P35123 Gm37449-201ENSMUST00000193016 270 ntBASIC3.71□□□□□ -1.82
Usp4P35123 Gm37001-201ENSMUST00000193377 190 ntBASIC3.71□□□□□ -1.82
Usp4P35123 Gm18658-201ENSMUST00000195558 270 ntBASIC3.71□□□□□ -1.82
Usp4P35123 Gm44977-201ENSMUST00000205283 420 ntBASIC3.71□□□□□ -1.82
Usp4P35123 AC140785.1-201ENSMUST00000217782 383 ntBASIC3.71□□□□□ -1.82
Usp4P35123 AC121898.1-201ENSMUST00000227599 288 ntBASIC3.71□□□□□ -1.82
Usp4P35123 AC129017.1-201ENSMUST00000228363 270 ntBASIC3.71□□□□□ -1.82
Usp4P35123 Gm25078-201ENSMUST00000082530 107 ntBASIC3.71□□□□□ -1.82
Usp4P35123 Mir32-201ENSMUST00000083610 70 ntBASIC3.71□□□□□ -1.82
Usp4P35123 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Usp4P35123 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
Usp4P35123 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
Usp4P35123 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Usp4P35123 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Usp4P35123 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC3.7□□□□□ -1.82
Usp4P35123 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Usp4P35123 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC3.7□□□□□ -1.82
Usp4P35123 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
Usp4P35123 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC3.7□□□□□ -1.82
Usp4P35123 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Usp4P35123 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC3.7□□□□□ -1.82
Usp4P35123 Gm24314-201ENSMUST00000158274 123 ntBASIC3.7□□□□□ -1.82
Usp4P35123 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC3.7□□□□□ -1.82
Usp4P35123 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC3.7□□□□□ -1.82
Usp4P35123 Gm27520-201ENSMUST00000184872 81 ntBASIC3.7□□□□□ -1.82
Usp4P35123 Gm27392-201ENSMUST00000185041 101 ntBASIC3.7□□□□□ -1.82
Usp4P35123 Gm37713-201ENSMUST00000191746 198 ntBASIC3.7□□□□□ -1.82
Usp4P35123 Gm37617-201ENSMUST00000194309 159 ntBASIC3.7□□□□□ -1.82
Usp4P35123 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC3.7□□□□□ -1.82
Usp4P35123 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC3.7□□□□□ -1.82
Usp4P35123 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC3.7□□□□□ -1.82
Usp4P35123 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC3.7□□□□□ -1.82
Usp4P35123 Gm24147-201ENSMUST00000082763 144 ntBASIC3.7□□□□□ -1.82
Usp4P35123 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
Usp4P35123 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.7□□□□□ -1.82
Usp4P35123 Gm36944-201ENSMUST00000192257 2759 ntBASIC3.69□□□□□ -1.82
Usp4P35123 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Usp4P35123 Gm12080-201ENSMUST00000119821 1883 ntBASIC3.69□□□□□ -1.82
Usp4P35123 Gm13714-201ENSMUST00000117313 221 ntBASIC3.69□□□□□ -1.82
Usp4P35123 Mup-ps20-201ENSMUST00000121132 389 ntBASIC3.69□□□□□ -1.82
Usp4P35123 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Usp4P35123 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.69□□□□□ -1.82
Usp4P35123 Gm22654-201ENSMUST00000157874 105 ntBASIC3.69□□□□□ -1.82
Usp4P35123 Gm23196-201ENSMUST00000158806 107 ntBASIC3.69□□□□□ -1.82
Usp4P35123 Gm22531-201ENSMUST00000158819 140 ntBASIC3.69□□□□□ -1.82
Usp4P35123 Gm25162-201ENSMUST00000158906 159 ntBASIC3.69□□□□□ -1.82
Usp4P35123 Gm20399-201ENSMUST00000174652 132 ntBASIC3.69□□□□□ -1.82
Usp4P35123 Gm20651-201ENSMUST00000177219 329 ntBASIC3.69□□□□□ -1.82
Usp4P35123 Gm23355-201ENSMUST00000177614 107 ntBASIC3.69□□□□□ -1.82
Usp4P35123 Gm25121-201ENSMUST00000179846 79 ntBASIC3.69□□□□□ -1.82
Usp4P35123 Gm23148-201ENSMUST00000180367 107 ntBASIC3.69□□□□□ -1.82
Usp4P35123 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC3.69□□□□□ -1.82
Usp4P35123 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC3.69□□□□□ -1.82
Usp4P35123 AC124581.4-201ENSMUST00000225874 463 ntBASIC3.69□□□□□ -1.82
Usp4P35123 AC134577.1-201ENSMUST00000227572 295 ntBASIC3.69□□□□□ -1.82
Usp4P35123 Gm22245-201ENSMUST00000082479 103 ntBASIC3.69□□□□□ -1.82
Usp4P35123 Gm25258-201ENSMUST00000083049 107 ntBASIC3.69□□□□□ -1.82
Usp4P35123 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
Usp4P35123 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Usp4P35123 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
Usp4P35123 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Usp4P35123 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Usp4P35123 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Usp4P35123 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Usp4P35123 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Usp4P35123 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Usp4P35123 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Usp4P35123 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC3.68□□□□□ -1.82
Usp4P35123 Gm25664-201ENSMUST00000157697 107 ntBASIC3.68□□□□□ -1.82
Usp4P35123 Gm25977-201ENSMUST00000158697 85 ntBASIC3.68□□□□□ -1.82
Usp4P35123 Gm27189-201ENSMUST00000184119 190 ntBASIC3.68□□□□□ -1.82
Usp4P35123 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
Usp4P35123 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Usp4P35123 Gm9818-201ENSMUST00000050900 255 ntBASIC3.68□□□□□ -1.82
Usp4P35123 Snord15a-201ENSMUST00000083888 148 ntBASIC3.68□□□□□ -1.82
Usp4P35123 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
Usp4P35123 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Usp4P35123 Gm37848-201ENSMUST00000195288 3103 ntBASIC3.68□□□□□ -1.82
Usp4P35123 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
Usp4P35123 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Usp4P35123 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Usp4P35123 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Usp4P35123 Gm24127-201ENSMUST00000104110 130 ntBASIC3.67□□□□□ -1.82
Usp4P35123 Gm15896-201ENSMUST00000118045 440 ntBASIC3.67□□□□□ -1.82
Usp4P35123 Gm6574-201ENSMUST00000120037 362 ntBASIC3.67□□□□□ -1.82
Usp4P35123 Gm12276-201ENSMUST00000121709 301 ntBASIC3.67□□□□□ -1.82
Usp4P35123 n-R5s68-201ENSMUST00000122639 82 ntBASIC3.67□□□□□ -1.82
Usp4P35123 Gm24730-201ENSMUST00000158228 117 ntBASIC3.67□□□□□ -1.82
Usp4P35123 Gm20450-201ENSMUST00000173652 147 ntBASIC3.67□□□□□ -1.82
Usp4P35123 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC3.67□□□□□ -1.82
Usp4P35123 Gm21893-201ENSMUST00000179119 397 ntBASIC3.67□□□□□ -1.82
Usp4P35123 Gm37104-201ENSMUST00000193278 196 ntBASIC3.67□□□□□ -1.82
Usp4P35123 Gm18982-201ENSMUST00000198118 529 ntBASIC3.67□□□□□ -1.82
Usp4P35123 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.67□□□□□ -1.82
Usp4P35123 Gm45860-201ENSMUST00000212700 334 ntBASIC3.67□□□□□ -1.82
Usp4P35123 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC3.67□□□□□ -1.82
Usp4P35123 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Usp4P35123 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.67□□□□□ -1.82
Usp4P35123 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms