Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Sdc1P18828 Ighv12-1-201ENSMUST00000195542 329 ntBASIC1.68□□□□□ -2.14
Sdc1P18828 Gm45658-201ENSMUST00000209197 580 ntBASIC1.68□□□□□ -2.14
Sdc1P18828 AC159709.1-201ENSMUST00000220445 349 ntBASIC1.68□□□□□ -2.14
Sdc1P18828 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC1.68□□□□□ -2.14
Sdc1P18828 AC154521.1-201ENSMUST00000222635 330 ntBASIC1.68□□□□□ -2.14
Sdc1P18828 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC1.68□□□□□ -2.14
Sdc1P18828 Gm10025-201ENSMUST00000079568 372 ntBASIC1.68□□□□□ -2.14
Sdc1P18828 Gm22249-201ENSMUST00000082485 136 ntBASIC1.68□□□□□ -2.14
Sdc1P18828 Gm22622-201ENSMUST00000082870 129 ntBASIC1.68□□□□□ -2.14
Sdc1P18828 Mir128-1-201ENSMUST00000083586 70 ntBASIC1.68□□□□□ -2.14
Sdc1P18828 Mir29c-201ENSMUST00000083614 88 ntBASIC1.68□□□□□ -2.14
Sdc1P18828 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Sdc1P18828 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC1.67□□□□□ -2.14
Sdc1P18828 Gm25113-201ENSMUST00000157185 143 ntBASIC1.67□□□□□ -2.14
Sdc1P18828 Gm23829-201ENSMUST00000157392 270 ntBASIC1.67□□□□□ -2.14
Sdc1P18828 Gm25888-201ENSMUST00000157778 302 ntBASIC1.67□□□□□ -2.14
Sdc1P18828 Gm24241-201ENSMUST00000157787 145 ntBASIC1.67□□□□□ -2.14
Sdc1P18828 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Sdc1P18828 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Sdc1P18828 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Sdc1P18828 Gm23144-201ENSMUST00000180226 107 ntBASIC1.67□□□□□ -2.14
Sdc1P18828 Mir7013-201ENSMUST00000183540 72 ntBASIC1.67□□□□□ -2.14
Sdc1P18828 Gm27722-201ENSMUST00000183908 76 ntBASIC1.67□□□□□ -2.14
Sdc1P18828 Gm27878-201ENSMUST00000184000 106 ntBASIC1.67□□□□□ -2.14
Sdc1P18828 Ighv1-1-201ENSMUST00000194912 291 ntBASIC1.67□□□□□ -2.14
Sdc1P18828 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Sdc1P18828 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC1.67□□□□□ -2.14
Sdc1P18828 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC1.67□□□□□ -2.14
Sdc1P18828 Gm43680-201ENSMUST00000199466 340 ntBASIC1.67□□□□□ -2.14
Sdc1P18828 Gm45071-201ENSMUST00000205353 571 ntBASIC1.67□□□□□ -2.14
Sdc1P18828 AC150314.1-201ENSMUST00000214798 238 ntBASIC1.67□□□□□ -2.14
Sdc1P18828 AC188459.1-201ENSMUST00000216651 300 ntBASIC1.67□□□□□ -2.14
Sdc1P18828 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC1.67□□□□□ -2.14
Sdc1P18828 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC1.67□□□□□ -2.14
Sdc1P18828 Snora33-201ENSMUST00000093556 129 ntBASIC1.67□□□□□ -2.14
Sdc1P18828 AL645643.1-201ENSMUST00000222438 3897 ntBASIC1.66□□□□□ -2.14
Sdc1P18828 Gm42942-201ENSMUST00000196086 1328 ntBASIC1.66□□□□□ -2.14
Sdc1P18828 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
Sdc1P18828 Gm23422-201ENSMUST00000102000 107 ntBASIC1.66□□□□□ -2.14
Sdc1P18828 Gm8858-201ENSMUST00000118259 342 ntBASIC1.66□□□□□ -2.14
Sdc1P18828 Gm11786-201ENSMUST00000120799 155 ntBASIC1.66□□□□□ -2.14
Sdc1P18828 Gm12412-201ENSMUST00000121867 328 ntBASIC1.66□□□□□ -2.14
Sdc1P18828 Gm14366-201ENSMUST00000121970 730 ntBASIC1.66□□□□□ -2.14
Sdc1P18828 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC1.66□□□□□ -2.14
Sdc1P18828 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC1.66□□□□□ -2.14
Sdc1P18828 Gm25625-201ENSMUST00000157221 96 ntBASIC1.66□□□□□ -2.14
Sdc1P18828 Gm24962-201ENSMUST00000157917 109 ntBASIC1.66□□□□□ -2.14
Sdc1P18828 Gm24958-201ENSMUST00000158009 97 ntBASIC1.66□□□□□ -2.14
Sdc1P18828 Gm23352-201ENSMUST00000158428 64 ntBASIC1.66□□□□□ -2.14
Sdc1P18828 Gm24885-201ENSMUST00000158783 270 ntBASIC1.66□□□□□ -2.14
Sdc1P18828 Ear-ps4-201ENSMUST00000166834 450 ntBASIC1.66□□□□□ -2.14
Sdc1P18828 Gm17161-201ENSMUST00000169187 524 ntBASIC1.66□□□□□ -2.14
Sdc1P18828 Gm25457-201ENSMUST00000179509 107 ntBASIC1.66□□□□□ -2.14
Sdc1P18828 Gm27249-201ENSMUST00000185049 328 ntBASIC1.66□□□□□ -2.14
Sdc1P18828 Gm37727-201ENSMUST00000191637 819 ntBASIC1.66□□□□□ -2.14
Sdc1P18828 Snord43-201ENSMUST00000199549 108 ntBASIC1.66□□□□□ -2.14
Sdc1P18828 Gm43513-201ENSMUST00000199779 1076 ntBASIC1.66□□□□□ -2.14
Sdc1P18828 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC1.66□□□□□ -2.14
Sdc1P18828 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC1.66□□□□□ -2.14
Sdc1P18828 Gm45452-201ENSMUST00000210905 177 ntBASIC1.66□□□□□ -2.14
Sdc1P18828 AC154527.5-201ENSMUST00000224448 496 ntBASIC1.66□□□□□ -2.14
Sdc1P18828 AC139350.4-201ENSMUST00000228483 798 ntBASIC1.66□□□□□ -2.14
Sdc1P18828 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
Sdc1P18828 Gm25124-201ENSMUST00000083345 164 ntBASIC1.66□□□□□ -2.14
Sdc1P18828 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
Sdc1P18828 Gm42664-201ENSMUST00000199417 3239 ntBASIC1.66□□□□□ -2.14
Sdc1P18828 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.14
Sdc1P18828 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
Sdc1P18828 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC1.65□□□□□ -2.15
Sdc1P18828 Gm25090-201ENSMUST00000104000 132 ntBASIC1.65□□□□□ -2.15
Sdc1P18828 Gm24889-201ENSMUST00000104388 132 ntBASIC1.65□□□□□ -2.15
Sdc1P18828 Mir465c-2-201ENSMUST00000104757 81 ntBASIC1.65□□□□□ -2.15
Sdc1P18828 Gm12370-201ENSMUST00000117809 604 ntBASIC1.65□□□□□ -2.15
Sdc1P18828 Gm12793-201ENSMUST00000119268 292 ntBASIC1.65□□□□□ -2.15
Sdc1P18828 Gm13409-201ENSMUST00000122072 546 ntBASIC1.65□□□□□ -2.15
Sdc1P18828 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC1.65□□□□□ -2.15
Sdc1P18828 Gm23317-201ENSMUST00000157999 129 ntBASIC1.65□□□□□ -2.15
Sdc1P18828 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC1.65□□□□□ -2.15
Sdc1P18828 Gm25994-201ENSMUST00000175392 101 ntBASIC1.65□□□□□ -2.15
Sdc1P18828 Gm24573-201ENSMUST00000175499 112 ntBASIC1.65□□□□□ -2.15
Sdc1P18828 Gm22851-201ENSMUST00000178741 94 ntBASIC1.65□□□□□ -2.15
Sdc1P18828 Gm25074-201ENSMUST00000178782 94 ntBASIC1.65□□□□□ -2.15
Sdc1P18828 Gm5900-201ENSMUST00000179862 375 ntBASIC1.65□□□□□ -2.15
Sdc1P18828 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.65□□□□□ -2.15
Sdc1P18828 Gm27505-201ENSMUST00000185071 110 ntBASIC1.65□□□□□ -2.15
Sdc1P18828 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC1.65□□□□□ -2.15
Sdc1P18828 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
Sdc1P18828 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC1.65□□□□□ -2.15
Sdc1P18828 Gm2676-201ENSMUST00000207279 606 ntBASIC1.65□□□□□ -2.15
Sdc1P18828 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC1.65□□□□□ -2.15
Sdc1P18828 AC158597.1-201ENSMUST00000216234 150 ntBASIC1.65□□□□□ -2.15
Sdc1P18828 AC147240.1-201ENSMUST00000218767 431 ntBASIC1.65□□□□□ -2.15
Sdc1P18828 AC124537.1-201ENSMUST00000222890 159 ntBASIC1.65□□□□□ -2.15
Sdc1P18828 AC162934.3-201ENSMUST00000223015 841 ntBASIC1.65□□□□□ -2.15
Sdc1P18828 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC1.65□□□□□ -2.15
Sdc1P18828 AC129085.5-201ENSMUST00000225468 400 ntBASIC1.65□□□□□ -2.15
Sdc1P18828 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
Sdc1P18828 Mir151-201ENSMUST00000083678 68 ntBASIC1.65□□□□□ -2.15
Sdc1P18828 Mir465c-1-201ENSMUST00000093560 81 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 148.6 ms