Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm12941-201ENSMUST00000117934 220 ntBASIC1.68□□□□□ -2.14
Cdx1P18111 Gm14709-201ENSMUST00000121225 304 ntBASIC1.68□□□□□ -2.14
Cdx1P18111 Gm25454-201ENSMUST00000157947 315 ntBASIC1.68□□□□□ -2.14
Cdx1P18111 Spanxn4-201ENSMUST00000172433 424 ntBASIC1.68□□□□□ -2.14
Cdx1P18111 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC1.68□□□□□ -2.14
Cdx1P18111 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Cdx1P18111 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Cdx1P18111 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Cdx1P18111 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC1.68□□□□□ -2.14
Cdx1P18111 Gm44212-201ENSMUST00000205016 897 ntBASIC1.68□□□□□ -2.14
Cdx1P18111 AC158597.1-201ENSMUST00000216234 150 ntBASIC1.68□□□□□ -2.14
Cdx1P18111 AC164629.1-201ENSMUST00000220250 1113 ntBASIC1.68□□□□□ -2.14
Cdx1P18111 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Cdx1P18111 AC125374.3-201ENSMUST00000214983 2810 ntBASIC1.68□□□□□ -2.14
Cdx1P18111 AC134917.1-201ENSMUST00000220517 1449 ntBASIC1.67□□□□□ -2.14
Cdx1P18111 Mir687-201ENSMUST00000102166 89 ntBASIC1.67□□□□□ -2.14
Cdx1P18111 Gm26077-201ENSMUST00000104064 123 ntBASIC1.67□□□□□ -2.14
Cdx1P18111 Gm25563-201ENSMUST00000104603 74 ntBASIC1.67□□□□□ -2.14
Cdx1P18111 Gm13439-201ENSMUST00000117541 409 ntBASIC1.67□□□□□ -2.14
Cdx1P18111 Gm13433-201ENSMUST00000121701 240 ntBASIC1.67□□□□□ -2.14
Cdx1P18111 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC1.67□□□□□ -2.14
Cdx1P18111 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC1.67□□□□□ -2.14
Cdx1P18111 Gm25888-201ENSMUST00000157778 302 ntBASIC1.67□□□□□ -2.14
Cdx1P18111 Gm23181-201ENSMUST00000158685 110 ntBASIC1.67□□□□□ -2.14
Cdx1P18111 Gm16162-201ENSMUST00000162296 297 ntBASIC1.67□□□□□ -2.14
Cdx1P18111 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC1.67□□□□□ -2.14
Cdx1P18111 Gm25451-201ENSMUST00000177832 121 ntBASIC1.67□□□□□ -2.14
Cdx1P18111 Mir6406-201ENSMUST00000183592 120 ntBASIC1.67□□□□□ -2.14
Cdx1P18111 Gm27979-201ENSMUST00000185126 56 ntBASIC1.67□□□□□ -2.14
Cdx1P18111 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC1.67□□□□□ -2.14
Cdx1P18111 Gm28956-201ENSMUST00000189047 427 ntBASIC1.67□□□□□ -2.14
Cdx1P18111 Gm37377-201ENSMUST00000191733 304 ntBASIC1.67□□□□□ -2.14
Cdx1P18111 Gm37757-201ENSMUST00000193072 210 ntBASIC1.67□□□□□ -2.14
Cdx1P18111 Gm42509-201ENSMUST00000197390 781 ntBASIC1.67□□□□□ -2.14
Cdx1P18111 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Cdx1P18111 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC1.67□□□□□ -2.14
Cdx1P18111 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC1.67□□□□□ -2.14
Cdx1P18111 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Cdx1P18111 AC101677.1-201ENSMUST00000218590 158 ntBASIC1.67□□□□□ -2.14
Cdx1P18111 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC1.67□□□□□ -2.14
Cdx1P18111 AC113031.4-201ENSMUST00000228381 514 ntBASIC1.67□□□□□ -2.14
Cdx1P18111 Gm24165-201ENSMUST00000082718 128 ntBASIC1.67□□□□□ -2.14
Cdx1P18111 Gm23377-201ENSMUST00000082943 126 ntBASIC1.67□□□□□ -2.14
Cdx1P18111 Mir322-201ENSMUST00000083484 95 ntBASIC1.67□□□□□ -2.14
Cdx1P18111 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Cdx1P18111 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Cdx1P18111 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Cdx1P18111 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
Cdx1P18111 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Cdx1P18111 Gm24430-201ENSMUST00000104077 104 ntBASIC1.66□□□□□ -2.14
Cdx1P18111 Gm15175-201ENSMUST00000117629 132 ntBASIC1.66□□□□□ -2.14
Cdx1P18111 Gm14417-201ENSMUST00000120036 1074 ntBASIC1.66□□□□□ -2.14
Cdx1P18111 Gm13356-201ENSMUST00000121678 335 ntBASIC1.66□□□□□ -2.14
Cdx1P18111 Gm23172-201ENSMUST00000157160 124 ntBASIC1.66□□□□□ -2.14
Cdx1P18111 Gm24222-201ENSMUST00000158834 93 ntBASIC1.66□□□□□ -2.14
Cdx1P18111 Gm18356-201ENSMUST00000185677 623 ntBASIC1.66□□□□□ -2.14
Cdx1P18111 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC1.66□□□□□ -2.14
Cdx1P18111 Gm28399-201ENSMUST00000186221 318 ntBASIC1.66□□□□□ -2.14
Cdx1P18111 Gm28572-201ENSMUST00000187444 318 ntBASIC1.66□□□□□ -2.14
Cdx1P18111 Gm43114-201ENSMUST00000198298 343 ntBASIC1.66□□□□□ -2.14
Cdx1P18111 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC1.66□□□□□ -2.14
Cdx1P18111 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
Cdx1P18111 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC1.66□□□□□ -2.14
Cdx1P18111 AC123533.1-201ENSMUST00000227782 446 ntBASIC1.66□□□□□ -2.14
Cdx1P18111 Gm26263-201ENSMUST00000083281 164 ntBASIC1.66□□□□□ -2.14
Cdx1P18111 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
Cdx1P18111 Zfp640-202ENSMUST00000224116 1562 ntBASIC1.66□□□□□ -2.14
Cdx1P18111 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Cdx1P18111 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Cdx1P18111 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
Cdx1P18111 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Cdx1P18111 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
Cdx1P18111 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
Cdx1P18111 Gm14674-201ENSMUST00000117816 342 ntBASIC1.65□□□□□ -2.15
Cdx1P18111 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC1.65□□□□□ -2.15
Cdx1P18111 Gm14551-201ENSMUST00000120802 256 ntBASIC1.65□□□□□ -2.15
Cdx1P18111 Gm25784-201ENSMUST00000122524 81 ntBASIC1.65□□□□□ -2.15
Cdx1P18111 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC1.65□□□□□ -2.15
Cdx1P18111 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
Cdx1P18111 Gm23048-201ENSMUST00000157237 129 ntBASIC1.65□□□□□ -2.15
Cdx1P18111 Gm23230-201ENSMUST00000157298 133 ntBASIC1.65□□□□□ -2.15
Cdx1P18111 Gm22803-201ENSMUST00000158049 283 ntBASIC1.65□□□□□ -2.15
Cdx1P18111 Gm5277-201ENSMUST00000164923 556 ntBASIC1.65□□□□□ -2.15
Cdx1P18111 Gm20543-201ENSMUST00000174200 726 ntBASIC1.65□□□□□ -2.15
Cdx1P18111 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC1.65□□□□□ -2.15
Cdx1P18111 Gm23568-201ENSMUST00000177960 92 ntBASIC1.65□□□□□ -2.15
Cdx1P18111 Gm24829-201ENSMUST00000179245 92 ntBASIC1.65□□□□□ -2.15
Cdx1P18111 Gm11395-201ENSMUST00000181011 499 ntBASIC1.65□□□□□ -2.15
Cdx1P18111 Mir6997-201ENSMUST00000184313 71 ntBASIC1.65□□□□□ -2.15
Cdx1P18111 Mir7017-201ENSMUST00000184894 62 ntBASIC1.65□□□□□ -2.15
Cdx1P18111 Gm29657-201ENSMUST00000189807 342 ntBASIC1.65□□□□□ -2.15
Cdx1P18111 Gm28404-201ENSMUST00000190242 453 ntBASIC1.65□□□□□ -2.15
Cdx1P18111 Ighv1-32-201ENSMUST00000195149 351 ntBASIC1.65□□□□□ -2.15
Cdx1P18111 Gm42164-201ENSMUST00000198881 379 ntBASIC1.65□□□□□ -2.15
Cdx1P18111 Gm45232-201ENSMUST00000207811 162 ntBASIC1.65□□□□□ -2.15
Cdx1P18111 Gm19032-201ENSMUST00000208584 592 ntBASIC1.65□□□□□ -2.15
Cdx1P18111 AC166358.6-201ENSMUST00000221834 1206 ntBASIC1.65□□□□□ -2.15
Cdx1P18111 AC173482.2-201ENSMUST00000224044 750 ntBASIC1.65□□□□□ -2.15
Cdx1P18111 Gm22062-201ENSMUST00000082563 107 ntBASIC1.65□□□□□ -2.15
Cdx1P18111 Mir222-201ENSMUST00000083537 79 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 423.4 ms