Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm33354-201ENSMUST00000195448 906 ntBASIC1.02□□□□□ -2.25
Col1a1P11087 Gm9402-201ENSMUST00000196849 388 ntBASIC1.02□□□□□ -2.25
Col1a1P11087 Gm44459-201ENSMUST00000203926 160 ntBASIC1.02□□□□□ -2.25
Col1a1P11087 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC1.02□□□□□ -2.25
Col1a1P11087 Gm45614-201ENSMUST00000209994 721 ntBASIC1.02□□□□□ -2.25
Col1a1P11087 Gm45375-201ENSMUST00000210338 280 ntBASIC1.02□□□□□ -2.25
Col1a1P11087 Gm8940-201ENSMUST00000212585 219 ntBASIC1.02□□□□□ -2.25
Col1a1P11087 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC1.02□□□□□ -2.25
Col1a1P11087 Gm35262-201ENSMUST00000215133 267 ntBASIC1.02□□□□□ -2.25
Col1a1P11087 Gm45263-201ENSMUST00000210377 1375 ntBASIC1.02□□□□□ -2.25
Col1a1P11087 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
Col1a1P11087 Gm14674-201ENSMUST00000117816 342 ntBASIC1.01□□□□□ -2.25
Col1a1P11087 Gm9703-201ENSMUST00000119573 343 ntBASIC1.01□□□□□ -2.25
Col1a1P11087 Gm14800-201ENSMUST00000122084 1272 ntBASIC1.01□□□□□ -2.25
Col1a1P11087 Mir1904-201ENSMUST00000122702 80 ntBASIC1.01□□□□□ -2.25
Col1a1P11087 Gm16129-201ENSMUST00000152628 486 ntBASIC1.01□□□□□ -2.25
Col1a1P11087 Gm25624-201ENSMUST00000157222 275 ntBASIC1.01□□□□□ -2.25
Col1a1P11087 Gm24262-201ENSMUST00000157431 144 ntBASIC1.01□□□□□ -2.25
Col1a1P11087 Gm44404-201ENSMUST00000203979 636 ntBASIC1.01□□□□□ -2.25
Col1a1P11087 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC1.01□□□□□ -2.25
Col1a1P11087 Gm24772-201ENSMUST00000158507 110 ntBASIC1□□□□□ -2.25
Col1a1P11087 Gm28453-203ENSMUST00000187041 189 ntBASIC1□□□□□ -2.25
Col1a1P11087 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1□□□□□ -2.25
Col1a1P11087 Gm28862-201ENSMUST00000188246 163 ntBASIC1□□□□□ -2.25
Col1a1P11087 Olfr165-203ENSMUST00000206410 1040 ntAPPRIS P2 BASIC1□□□□□ -2.25
Col1a1P11087 Olfr165-201ENSMUST00000052516 1040 ntAPPRIS ALT1 BASIC1□□□□□ -2.25
Col1a1P11087 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC1□□□□□ -2.25
Col1a1P11087 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC1□□□□□ -2.25
Col1a1P11087 Mir107-201ENSMUST00000083660 87 ntBASIC1□□□□□ -2.25
Col1a1P11087 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC1□□□□□ -2.25
Col1a1P11087 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC0.99□□□□□ -2.25
Col1a1P11087 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC0.99□□□□□ -2.25
Col1a1P11087 Mir669f-201ENSMUST00000103850 121 ntBASIC0.99□□□□□ -2.25
Col1a1P11087 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC0.99□□□□□ -2.25
Col1a1P11087 Gm12191-201ENSMUST00000118307 348 ntBASIC0.99□□□□□ -2.25
Col1a1P11087 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC0.99□□□□□ -2.25
Col1a1P11087 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.99□□□□□ -2.25
Col1a1P11087 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC0.99□□□□□ -2.25
Col1a1P11087 AC160031.2-201ENSMUST00000218242 274 ntBASIC0.99□□□□□ -2.25
Col1a1P11087 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
Col1a1P11087 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC0.99□□□□□ -2.25
Col1a1P11087 Gm23939-201ENSMUST00000082880 133 ntBASIC0.99□□□□□ -2.25
Col1a1P11087 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC0.99□□□□□ -2.25
Col1a1P11087 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC0.99□□□□□ -2.25
Col1a1P11087 Gm14355-201ENSMUST00000117352 264 ntBASIC0.99□□□□□ -2.25
Col1a1P11087 Gm14677-201ENSMUST00000117866 486 ntBASIC0.99□□□□□ -2.25
Col1a1P11087 Gm12646-201ENSMUST00000119144 238 ntBASIC0.99□□□□□ -2.25
Col1a1P11087 Gm12313-201ENSMUST00000121347 421 ntBASIC0.99□□□□□ -2.25
Col1a1P11087 Gm23463-201ENSMUST00000122468 99 ntBASIC0.99□□□□□ -2.25
Col1a1P11087 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC0.99□□□□□ -2.25
Col1a1P11087 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
Col1a1P11087 Gm44483-201ENSMUST00000197203 97 ntBASIC0.99□□□□□ -2.25
Col1a1P11087 Gm43171-201ENSMUST00000199882 291 ntBASIC0.99□□□□□ -2.25
Col1a1P11087 Igkv1-136-201ENSMUST00000200635 297 ntBASIC0.99□□□□□ -2.25
Col1a1P11087 Gm44041-201ENSMUST00000203678 396 ntBASIC0.99□□□□□ -2.25
Col1a1P11087 Gm8219-201ENSMUST00000218309 242 ntBASIC0.99□□□□□ -2.25
Col1a1P11087 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
Col1a1P11087 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
Col1a1P11087 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
Col1a1P11087 Gm24805-201ENSMUST00000082931 104 ntBASIC0.99□□□□□ -2.25
Col1a1P11087 Gm44286-201ENSMUST00000204098 1487 ntBASIC0.98□□□□□ -2.25
Col1a1P11087 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC0.98□□□□□ -2.25
Col1a1P11087 Gm23172-201ENSMUST00000157160 124 ntBASIC0.98□□□□□ -2.25
Col1a1P11087 Gm22862-201ENSMUST00000178593 121 ntBASIC0.98□□□□□ -2.25
Col1a1P11087 Gm28437-201ENSMUST00000190277 783 ntBASIC0.98□□□□□ -2.25
Col1a1P11087 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
Col1a1P11087 Gm7871-201ENSMUST00000195346 618 ntBASIC0.98□□□□□ -2.25
Col1a1P11087 Gm44656-201ENSMUST00000208428 490 ntBASIC0.98□□□□□ -2.25
Col1a1P11087 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC0.98□□□□□ -2.25
Col1a1P11087 AC165293.1-201ENSMUST00000219669 329 ntBASIC0.98□□□□□ -2.25
Col1a1P11087 CT009733.1-201ENSMUST00000225322 425 ntBASIC0.98□□□□□ -2.25
Col1a1P11087 AC115357.1-201ENSMUST00000227575 466 ntBASIC0.98□□□□□ -2.25
Col1a1P11087 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
Col1a1P11087 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC0.97□□□□□ -2.25
Col1a1P11087 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
Col1a1P11087 Gm14835-201ENSMUST00000119039 315 ntBASIC0.97□□□□□ -2.25
Col1a1P11087 Gm26256-201ENSMUST00000122499 186 ntBASIC0.97□□□□□ -2.25
Col1a1P11087 Gm23473-201ENSMUST00000158883 116 ntBASIC0.97□□□□□ -2.25
Col1a1P11087 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
Col1a1P11087 Gm22776-201ENSMUST00000178634 94 ntBASIC0.97□□□□□ -2.25
Col1a1P11087 Gm23767-201ENSMUST00000179278 94 ntBASIC0.97□□□□□ -2.25
Col1a1P11087 Gm11392-201ENSMUST00000181419 710 ntBASIC0.97□□□□□ -2.25
Col1a1P11087 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
Col1a1P11087 Gm44384-201ENSMUST00000200208 114 ntBASIC0.97□□□□□ -2.25
Col1a1P11087 Gm34701-202ENSMUST00000204685 360 ntBASIC0.97□□□□□ -2.25
Col1a1P11087 AC158142.3-201ENSMUST00000226230 675 ntBASIC0.97□□□□□ -2.25
Col1a1P11087 CT485608.2-201ENSMUST00000227210 291 ntBASIC0.97□□□□□ -2.25
Col1a1P11087 Olfr197-201ENSMUST00000080031 926 ntBASIC0.97□□□□□ -2.25
Col1a1P11087 Gm7648-201ENSMUST00000173036 1658 ntBASIC0.97□□□□□ -2.25
Col1a1P11087 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
Col1a1P11087 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
Col1a1P11087 Gm11490-201ENSMUST00000118128 272 ntBASIC0.96□□□□□ -2.26
Col1a1P11087 Gm15312-201ENSMUST00000118827 271 ntBASIC0.96□□□□□ -2.26
Col1a1P11087 Gm16428-201ENSMUST00000121193 723 ntBASIC0.96□□□□□ -2.26
Col1a1P11087 Gm15530-201ENSMUST00000122206 555 ntBASIC0.96□□□□□ -2.26
Col1a1P11087 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC0.96□□□□□ -2.26
Col1a1P11087 Mir3473a-201ENSMUST00000175011 78 ntBASIC0.96□□□□□ -2.26
Col1a1P11087 Gm42924-201ENSMUST00000197261 185 ntBASIC0.96□□□□□ -2.26
Col1a1P11087 Gm43007-201ENSMUST00000197618 291 ntBASIC0.96□□□□□ -2.26
Col1a1P11087 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC0.96□□□□□ -2.26
Retrieved 100 of 76,532 protein–RNA pairs in 90.5 ms