Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC2.05□□□□□ -2.08
Cldn1O88551 Gm38261-201ENSMUST00000192608 316 ntBASIC2.05□□□□□ -2.08
Cldn1O88551 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Cldn1O88551 Ighv12-1-201ENSMUST00000195542 329 ntBASIC2.05□□□□□ -2.08
Cldn1O88551 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
Cldn1O88551 Igkv13-64-201ENSMUST00000198143 343 ntBASIC2.05□□□□□ -2.08
Cldn1O88551 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
Cldn1O88551 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.05□□□□□ -2.08
Cldn1O88551 Gm19032-201ENSMUST00000208584 592 ntBASIC2.05□□□□□ -2.08
Cldn1O88551 Gm8125-201ENSMUST00000216602 738 ntBASIC2.05□□□□□ -2.08
Cldn1O88551 AC158622.1-201ENSMUST00000217107 230 ntBASIC2.05□□□□□ -2.08
Cldn1O88551 Gm19441-201ENSMUST00000221545 330 ntBASIC2.05□□□□□ -2.08
Cldn1O88551 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC2.05□□□□□ -2.08
Cldn1O88551 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.05□□□□□ -2.08
Cldn1O88551 AC160962.2-201ENSMUST00000224761 632 ntBASIC2.05□□□□□ -2.08
Cldn1O88551 Gm23727-201ENSMUST00000083352 164 ntBASIC2.05□□□□□ -2.08
Cldn1O88551 Gm25257-201ENSMUST00000083907 110 ntBASIC2.05□□□□□ -2.08
Cldn1O88551 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC2.05□□□□□ -2.08
Cldn1O88551 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Cldn1O88551 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.05□□□□□ -2.08
Cldn1O88551 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Cldn1O88551 Gm15846-201ENSMUST00000116022 320 ntBASIC2.04□□□□□ -2.08
Cldn1O88551 Gm12941-201ENSMUST00000117934 220 ntBASIC2.04□□□□□ -2.08
Cldn1O88551 Gm22199-201ENSMUST00000122660 126 ntBASIC2.04□□□□□ -2.08
Cldn1O88551 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Cldn1O88551 Gm24418-201ENSMUST00000177597 79 ntBASIC2.04□□□□□ -2.08
Cldn1O88551 Gm24639-201ENSMUST00000178518 79 ntBASIC2.04□□□□□ -2.08
Cldn1O88551 Gm23076-201ENSMUST00000179082 79 ntBASIC2.04□□□□□ -2.08
Cldn1O88551 Gm25077-201ENSMUST00000179157 79 ntBASIC2.04□□□□□ -2.08
Cldn1O88551 Gm21729-201ENSMUST00000180058 664 ntBASIC2.04□□□□□ -2.08
Cldn1O88551 Gm21853-201ENSMUST00000180071 664 ntBASIC2.04□□□□□ -2.08
Cldn1O88551 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Cldn1O88551 Gm23862-201ENSMUST00000180342 94 ntBASIC2.04□□□□□ -2.08
Cldn1O88551 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC2.04□□□□□ -2.08
Cldn1O88551 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC2.04□□□□□ -2.08
Cldn1O88551 Gm29495-201ENSMUST00000189319 664 ntBASIC2.04□□□□□ -2.08
Cldn1O88551 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC2.04□□□□□ -2.08
Cldn1O88551 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC2.04□□□□□ -2.08
Cldn1O88551 Gm37658-201ENSMUST00000192672 315 ntBASIC2.04□□□□□ -2.08
Cldn1O88551 Gm37845-201ENSMUST00000194977 355 ntBASIC2.04□□□□□ -2.08
Cldn1O88551 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC2.04□□□□□ -2.08
Cldn1O88551 Gm5596-201ENSMUST00000207988 2421 ntBASIC2.04□□□□□ -2.08
Cldn1O88551 Olfr1285-201ENSMUST00000208523 903 ntBASIC2.04□□□□□ -2.08
Cldn1O88551 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Cldn1O88551 AC160031.2-201ENSMUST00000218242 274 ntBASIC2.04□□□□□ -2.08
Cldn1O88551 AC123062.1-201ENSMUST00000221287 481 ntBASIC2.04□□□□□ -2.08
Cldn1O88551 AC110380.1-201ENSMUST00000226987 389 ntBASIC2.04□□□□□ -2.08
Cldn1O88551 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Cldn1O88551 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
Cldn1O88551 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Cldn1O88551 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Cldn1O88551 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.03□□□□□ -2.08
Cldn1O88551 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
Cldn1O88551 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Cldn1O88551 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.03□□□□□ -2.08
Cldn1O88551 Gm11460-201ENSMUST00000118200 361 ntBASIC2.03□□□□□ -2.08
Cldn1O88551 Gm24839-201ENSMUST00000122602 107 ntBASIC2.03□□□□□ -2.08
Cldn1O88551 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC2.03□□□□□ -2.08
Cldn1O88551 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
Cldn1O88551 Gm23476-201ENSMUST00000158881 274 ntBASIC2.03□□□□□ -2.08
Cldn1O88551 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Cldn1O88551 Gm15914-201ENSMUST00000161922 309 ntBASIC2.03□□□□□ -2.08
Cldn1O88551 Gm8292-201ENSMUST00000162574 396 ntBASIC2.03□□□□□ -2.08
Cldn1O88551 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC2.03□□□□□ -2.08
Cldn1O88551 Gm20543-201ENSMUST00000174200 726 ntBASIC2.03□□□□□ -2.08
Cldn1O88551 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Cldn1O88551 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Cldn1O88551 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Cldn1O88551 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Cldn1O88551 Gm27313-201ENSMUST00000183500 142 ntBASIC2.03□□□□□ -2.08
Cldn1O88551 Gm42925-201ENSMUST00000197359 285 ntBASIC2.03□□□□□ -2.08
Cldn1O88551 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC2.03□□□□□ -2.08
Cldn1O88551 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC2.03□□□□□ -2.08
Cldn1O88551 Gm7692-201ENSMUST00000213534 409 ntBASIC2.03□□□□□ -2.08
Cldn1O88551 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC2.03□□□□□ -2.08
Cldn1O88551 CT025606.1-201ENSMUST00000218273 324 ntBASIC2.03□□□□□ -2.08
Cldn1O88551 AC140477.1-201ENSMUST00000222354 246 ntBASIC2.03□□□□□ -2.08
Cldn1O88551 Gm19118-201ENSMUST00000222554 98 ntBASIC2.03□□□□□ -2.08
Cldn1O88551 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.03□□□□□ -2.08
Cldn1O88551 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Cldn1O88551 Mir452-201ENSMUST00000093629 85 ntBASIC2.03□□□□□ -2.08
Cldn1O88551 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Cldn1O88551 Gm14852-201ENSMUST00000120065 647 ntBASIC2.02□□□□□ -2.09
Cldn1O88551 Gm11522-201ENSMUST00000120533 176 ntBASIC2.02□□□□□ -2.09
Cldn1O88551 Gm14638-201ENSMUST00000121338 216 ntBASIC2.02□□□□□ -2.09
Cldn1O88551 Gm12443-201ENSMUST00000122308 323 ntBASIC2.02□□□□□ -2.09
Cldn1O88551 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC2.02□□□□□ -2.09
Cldn1O88551 Gm23980-201ENSMUST00000157135 158 ntBASIC2.02□□□□□ -2.09
Cldn1O88551 Gm25559-201ENSMUST00000157182 74 ntBASIC2.02□□□□□ -2.09
Cldn1O88551 Gm23956-201ENSMUST00000157211 119 ntBASIC2.02□□□□□ -2.09
Cldn1O88551 Gm26105-201ENSMUST00000157253 190 ntBASIC2.02□□□□□ -2.09
Cldn1O88551 Gm16232-201ENSMUST00000162856 167 ntBASIC2.02□□□□□ -2.09
Cldn1O88551 Gm17062-201ENSMUST00000166987 461 ntBASIC2.02□□□□□ -2.09
Cldn1O88551 Gm8114-201ENSMUST00000172225 484 ntBASIC2.02□□□□□ -2.09
Cldn1O88551 Gm27761-201ENSMUST00000184091 131 ntBASIC2.02□□□□□ -2.09
Cldn1O88551 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC2.02□□□□□ -2.09
Cldn1O88551 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Cldn1O88551 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC2.02□□□□□ -2.09
Cldn1O88551 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC2.02□□□□□ -2.09
Cldn1O88551 AC154271.1-201ENSMUST00000224780 383 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms