Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
Col5a1O88207 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC1.61□□□□□ -2.15
Col5a1O88207 Gm22469-201ENSMUST00000104118 133 ntBASIC1.61□□□□□ -2.15
Col5a1O88207 Gm11352-201ENSMUST00000119264 517 ntBASIC1.61□□□□□ -2.15
Col5a1O88207 Gm14785-201ENSMUST00000120185 539 ntBASIC1.61□□□□□ -2.15
Col5a1O88207 Gm25784-201ENSMUST00000122524 81 ntBASIC1.61□□□□□ -2.15
Col5a1O88207 Gm23118-201ENSMUST00000122657 187 ntBASIC1.61□□□□□ -2.15
Col5a1O88207 Gm22765-201ENSMUST00000158371 128 ntBASIC1.61□□□□□ -2.15
Col5a1O88207 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC1.61□□□□□ -2.15
Col5a1O88207 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC1.61□□□□□ -2.15
Col5a1O88207 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
Col5a1O88207 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC1.61□□□□□ -2.15
Col5a1O88207 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC1.61□□□□□ -2.15
Col5a1O88207 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC1.61□□□□□ -2.15
Col5a1O88207 Gm43007-201ENSMUST00000197618 291 ntBASIC1.61□□□□□ -2.15
Col5a1O88207 Gm43991-201ENSMUST00000203751 274 ntBASIC1.61□□□□□ -2.15
Col5a1O88207 Gm44881-201ENSMUST00000205425 367 ntBASIC1.61□□□□□ -2.15
Col5a1O88207 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC1.61□□□□□ -2.15
Col5a1O88207 AC157017.1-201ENSMUST00000220148 364 ntBASIC1.61□□□□□ -2.15
Col5a1O88207 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC1.61□□□□□ -2.15
Col5a1O88207 AC153662.1-201ENSMUST00000222220 270 ntBASIC1.61□□□□□ -2.15
Col5a1O88207 AC173481.1-201ENSMUST00000223351 270 ntBASIC1.61□□□□□ -2.15
Col5a1O88207 CT009713.9-201ENSMUST00000223604 389 ntBASIC1.61□□□□□ -2.15
Col5a1O88207 AC124182.1-201ENSMUST00000227091 321 ntBASIC1.61□□□□□ -2.15
Col5a1O88207 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Col5a1O88207 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Col5a1O88207 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC1.61□□□□□ -2.15
Col5a1O88207 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Col5a1O88207 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
Col5a1O88207 Mir599-201ENSMUST00000102378 88 ntBASIC1.61□□□□□ -2.15
Col5a1O88207 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Col5a1O88207 Gm13714-201ENSMUST00000117313 221 ntBASIC1.61□□□□□ -2.15
Col5a1O88207 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC1.61□□□□□ -2.15
Col5a1O88207 n-R5s207-201ENSMUST00000122497 118 ntBASIC1.61□□□□□ -2.15
Col5a1O88207 Gm23332-201ENSMUST00000157424 275 ntBASIC1.61□□□□□ -2.15
Col5a1O88207 Gm25339-201ENSMUST00000157458 232 ntBASIC1.61□□□□□ -2.15
Col5a1O88207 Gm24783-201ENSMUST00000157639 100 ntBASIC1.61□□□□□ -2.15
Col5a1O88207 Mir3066-201ENSMUST00000175296 83 ntBASIC1.61□□□□□ -2.15
Col5a1O88207 Gm25198-201ENSMUST00000178574 110 ntBASIC1.61□□□□□ -2.15
Col5a1O88207 Gm25156-201ENSMUST00000179809 79 ntBASIC1.61□□□□□ -2.15
Col5a1O88207 Gm26960-201ENSMUST00000182263 412 ntBASIC1.61□□□□□ -2.15
Col5a1O88207 Gm17946-201ENSMUST00000186856 538 ntBASIC1.61□□□□□ -2.15
Col5a1O88207 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
Col5a1O88207 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.61□□□□□ -2.15
Col5a1O88207 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
Col5a1O88207 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC1.61□□□□□ -2.15
Col5a1O88207 Gm44274-201ENSMUST00000203417 256 ntBASIC1.61□□□□□ -2.15
Col5a1O88207 Gm44720-201ENSMUST00000206076 260 ntBASIC1.61□□□□□ -2.15
Col5a1O88207 Gm45049-201ENSMUST00000207586 591 ntBASIC1.61□□□□□ -2.15
Col5a1O88207 AC162387.1-201ENSMUST00000213369 213 ntBASIC1.61□□□□□ -2.15
Col5a1O88207 AC162931.1-201ENSMUST00000214184 267 ntBASIC1.61□□□□□ -2.15
Col5a1O88207 Gm18774-201ENSMUST00000218269 601 ntBASIC1.61□□□□□ -2.15
Col5a1O88207 Gm4921-201ENSMUST00000219804 992 ntBASIC1.61□□□□□ -2.15
Col5a1O88207 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC1.61□□□□□ -2.15
Col5a1O88207 AC154603.1-201ENSMUST00000224355 313 ntBASIC1.61□□□□□ -2.15
Col5a1O88207 Gm26055-201ENSMUST00000083038 107 ntBASIC1.61□□□□□ -2.15
Col5a1O88207 Mir19a-201ENSMUST00000083482 82 ntBASIC1.61□□□□□ -2.15
Col5a1O88207 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
Col5a1O88207 Gm11512-201ENSMUST00000119669 663 ntBASIC1.6□□□□□ -2.15
Col5a1O88207 Gm14841-201ENSMUST00000121067 758 ntBASIC1.6□□□□□ -2.15
Col5a1O88207 Gm13602-201ENSMUST00000122405 493 ntBASIC1.6□□□□□ -2.15
Col5a1O88207 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC1.6□□□□□ -2.15
Col5a1O88207 Gm23033-201ENSMUST00000157996 134 ntBASIC1.6□□□□□ -2.15
Col5a1O88207 Gm9613-201ENSMUST00000171662 196 ntBASIC1.6□□□□□ -2.15
Col5a1O88207 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
Col5a1O88207 Gm25670-201ENSMUST00000178423 107 ntBASIC1.6□□□□□ -2.15
Col5a1O88207 Gm26239-201ENSMUST00000178842 107 ntBASIC1.6□□□□□ -2.15
Col5a1O88207 Gm27161-201ENSMUST00000183960 562 ntBASIC1.6□□□□□ -2.15
Col5a1O88207 Gm27957-201ENSMUST00000184054 127 ntBASIC1.6□□□□□ -2.15
Col5a1O88207 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC1.6□□□□□ -2.15
Col5a1O88207 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC1.6□□□□□ -2.15
Col5a1O88207 Gm38329-201ENSMUST00000193473 427 ntBASIC1.6□□□□□ -2.15
Col5a1O88207 Gm44458-201ENSMUST00000196594 143 ntBASIC1.6□□□□□ -2.15
Col5a1O88207 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.6□□□□□ -2.15
Col5a1O88207 AC147101.1-201ENSMUST00000217964 312 ntBASIC1.6□□□□□ -2.15
Col5a1O88207 Gm35558-203ENSMUST00000222264 204 ntBASIC1.6□□□□□ -2.15
Col5a1O88207 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Col5a1O88207 Gm24292-201ENSMUST00000082888 107 ntBASIC1.6□□□□□ -2.15
Col5a1O88207 Mir344-201ENSMUST00000083634 95 ntBASIC1.6□□□□□ -2.15
Col5a1O88207 Gm43047-201ENSMUST00000200089 3460 ntBASIC1.6□□□□□ -2.15
Col5a1O88207 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Col5a1O88207 Gm11284-201ENSMUST00000121910 1887 ntBASIC1.6□□□□□ -2.15
Col5a1O88207 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
Col5a1O88207 Gm37630-201ENSMUST00000194210 1456 ntBASIC1.59□□□□□ -2.15
Col5a1O88207 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
Col5a1O88207 Gm23336-201ENSMUST00000117023 123 ntBASIC1.59□□□□□ -2.15
Col5a1O88207 Gm14359-201ENSMUST00000118883 424 ntBASIC1.59□□□□□ -2.15
Col5a1O88207 Gm14867-201ENSMUST00000120156 866 ntBASIC1.59□□□□□ -2.15
Col5a1O88207 Gm7916-201ENSMUST00000120325 456 ntBASIC1.59□□□□□ -2.15
Col5a1O88207 Gm9498-201ENSMUST00000140849 291 ntBASIC1.59□□□□□ -2.15
Col5a1O88207 Gm22563-201ENSMUST00000157333 269 ntBASIC1.59□□□□□ -2.15
Col5a1O88207 Gm25341-201ENSMUST00000157461 268 ntBASIC1.59□□□□□ -2.15
Col5a1O88207 Gm24174-201ENSMUST00000158933 111 ntBASIC1.59□□□□□ -2.15
Col5a1O88207 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC1.59□□□□□ -2.15
Col5a1O88207 Gm24154-201ENSMUST00000175261 130 ntBASIC1.59□□□□□ -2.15
Col5a1O88207 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC1.59□□□□□ -2.15
Col5a1O88207 Gm24306-201ENSMUST00000180229 79 ntBASIC1.59□□□□□ -2.15
Col5a1O88207 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC1.59□□□□□ -2.15
Col5a1O88207 Gm5116-201ENSMUST00000187732 463 ntBASIC1.59□□□□□ -2.15
Col5a1O88207 Gm29627-201ENSMUST00000187984 463 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 91.1 ms