Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm14428-201ENSMUST00000120408 822 ntBASIC1.05□□□□□ -2.24
Hmgb3O54879 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC1.05□□□□□ -2.24
Hmgb3O54879 Mir1942-201ENSMUST00000157274 63 ntBASIC1.05□□□□□ -2.24
Hmgb3O54879 Gm23754-201ENSMUST00000157576 63 ntBASIC1.05□□□□□ -2.24
Hmgb3O54879 Gm22768-201ENSMUST00000158366 153 ntBASIC1.05□□□□□ -2.24
Hmgb3O54879 Gm24358-201ENSMUST00000158424 288 ntBASIC1.05□□□□□ -2.24
Hmgb3O54879 Gm22944-201ENSMUST00000158662 133 ntBASIC1.05□□□□□ -2.24
Hmgb3O54879 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC1.05□□□□□ -2.24
Hmgb3O54879 Gm27428-201ENSMUST00000184289 110 ntBASIC1.05□□□□□ -2.24
Hmgb3O54879 Gm37578-201ENSMUST00000192256 1177 ntBASIC1.05□□□□□ -2.24
Hmgb3O54879 Gm37102-201ENSMUST00000195740 1105 ntBASIC1.05□□□□□ -2.24
Hmgb3O54879 Trdv3-201ENSMUST00000198551 309 ntBASIC1.05□□□□□ -2.24
Hmgb3O54879 Mir1291-201ENSMUST00000199842 117 ntBASIC1.05□□□□□ -2.24
Hmgb3O54879 Gm44564-201ENSMUST00000207985 180 ntBASIC1.05□□□□□ -2.24
Hmgb3O54879 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC1.05□□□□□ -2.24
Hmgb3O54879 Gm18774-201ENSMUST00000218269 601 ntBASIC1.05□□□□□ -2.24
Hmgb3O54879 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
Hmgb3O54879 Platr25-208ENSMUST00000222602 939 ntBASIC1.05□□□□□ -2.24
Hmgb3O54879 CT025538.2-201ENSMUST00000226083 772 ntBASIC1.05□□□□□ -2.24
Hmgb3O54879 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
Hmgb3O54879 Snord7-201ENSMUST00000083781 97 ntBASIC1.05□□□□□ -2.24
Hmgb3O54879 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
Hmgb3O54879 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
Hmgb3O54879 Mir1193-201ENSMUST00000116761 121 ntBASIC1.04□□□□□ -2.24
Hmgb3O54879 Gm13728-201ENSMUST00000117471 400 ntBASIC1.04□□□□□ -2.24
Hmgb3O54879 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC1.04□□□□□ -2.24
Hmgb3O54879 Gm23956-201ENSMUST00000157211 119 ntBASIC1.04□□□□□ -2.24
Hmgb3O54879 Gm24780-201ENSMUST00000157635 143 ntBASIC1.04□□□□□ -2.24
Hmgb3O54879 Gm25888-201ENSMUST00000157778 302 ntBASIC1.04□□□□□ -2.24
Hmgb3O54879 Gm25958-201ENSMUST00000175114 71 ntBASIC1.04□□□□□ -2.24
Hmgb3O54879 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
Hmgb3O54879 Gm27676-201ENSMUST00000183669 61 ntBASIC1.04□□□□□ -2.24
Hmgb3O54879 Gm38044-201ENSMUST00000192964 487 ntBASIC1.04□□□□□ -2.24
Hmgb3O54879 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC1.04□□□□□ -2.24
Hmgb3O54879 Gm43493-201ENSMUST00000199837 202 ntBASIC1.04□□□□□ -2.24
Hmgb3O54879 AC111046.1-201ENSMUST00000217715 412 ntBASIC1.04□□□□□ -2.24
Hmgb3O54879 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC1.04□□□□□ -2.24
Hmgb3O54879 AC123062.1-201ENSMUST00000221287 481 ntBASIC1.04□□□□□ -2.24
Hmgb3O54879 Gm25799-201ENSMUST00000082643 107 ntBASIC1.04□□□□□ -2.24
Hmgb3O54879 Snora3-201ENSMUST00000083082 132 ntBASIC1.04□□□□□ -2.24
Hmgb3O54879 Gm23645-201ENSMUST00000083228 108 ntBASIC1.04□□□□□ -2.24
Hmgb3O54879 Mir429-201ENSMUST00000083493 83 ntBASIC1.04□□□□□ -2.24
Hmgb3O54879 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.03□□□□□ -2.24
Hmgb3O54879 Gm25313-201ENSMUST00000101817 116 ntBASIC1.03□□□□□ -2.24
Hmgb3O54879 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
Hmgb3O54879 Gm6025-201ENSMUST00000121517 201 ntBASIC1.03□□□□□ -2.24
Hmgb3O54879 Gm24836-201ENSMUST00000122609 108 ntBASIC1.03□□□□□ -2.24
Hmgb3O54879 Gm6956-201ENSMUST00000134724 546 ntBASIC1.03□□□□□ -2.24
Hmgb3O54879 Gm22485-201ENSMUST00000157990 109 ntBASIC1.03□□□□□ -2.24
Hmgb3O54879 Gm23339-201ENSMUST00000158962 139 ntBASIC1.03□□□□□ -2.24
Hmgb3O54879 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
Hmgb3O54879 Gm23287-201ENSMUST00000179427 116 ntBASIC1.03□□□□□ -2.24
Hmgb3O54879 Gm23143-201ENSMUST00000180137 116 ntBASIC1.03□□□□□ -2.24
Hmgb3O54879 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
Hmgb3O54879 Gm9236-201ENSMUST00000196892 587 ntBASIC1.03□□□□□ -2.24
Hmgb3O54879 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC1.03□□□□□ -2.24
Hmgb3O54879 Gm45150-201ENSMUST00000206051 467 ntBASIC1.03□□□□□ -2.24
Hmgb3O54879 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
Hmgb3O54879 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
Hmgb3O54879 CT009696.2-201ENSMUST00000216668 432 ntBASIC1.03□□□□□ -2.24
Hmgb3O54879 AC126672.1-201ENSMUST00000217096 396 ntBASIC1.03□□□□□ -2.24
Hmgb3O54879 Gm9068-201ENSMUST00000217393 455 ntBASIC1.03□□□□□ -2.24
Hmgb3O54879 AC158521.1-201ENSMUST00000225295 660 ntBASIC1.03□□□□□ -2.24
Hmgb3O54879 Ear14-201ENSMUST00000049559 468 ntBASIC1.03□□□□□ -2.24
Hmgb3O54879 Gm22299-201ENSMUST00000082663 136 ntBASIC1.03□□□□□ -2.24
Hmgb3O54879 Gm26328-201ENSMUST00000082821 107 ntBASIC1.03□□□□□ -2.24
Hmgb3O54879 Gm24871-201ENSMUST00000083099 116 ntBASIC1.03□□□□□ -2.24
Hmgb3O54879 Gm25794-201ENSMUST00000083286 107 ntBASIC1.03□□□□□ -2.24
Hmgb3O54879 Gm23042-201ENSMUST00000083866 101 ntBASIC1.03□□□□□ -2.24
Hmgb3O54879 Rnu5g-201ENSMUST00000093721 116 ntBASIC1.03□□□□□ -2.24
Hmgb3O54879 Gm14390-201ENSMUST00000117505 1695 ntBASIC1.03□□□□□ -2.24
Hmgb3O54879 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.25
Hmgb3O54879 Gm22316-201ENSMUST00000158012 216 ntBASIC1.02□□□□□ -2.25
Hmgb3O54879 Gm20477-201ENSMUST00000174028 280 ntBASIC1.02□□□□□ -2.25
Hmgb3O54879 Gm25194-201ENSMUST00000177987 79 ntBASIC1.02□□□□□ -2.25
Hmgb3O54879 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC1.02□□□□□ -2.25
Hmgb3O54879 Gm29600-201ENSMUST00000188687 377 ntBASIC1.02□□□□□ -2.25
Hmgb3O54879 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC1.02□□□□□ -2.25
Hmgb3O54879 Gm7837-201ENSMUST00000190873 412 ntBASIC1.02□□□□□ -2.25
Hmgb3O54879 Gm43676-201ENSMUST00000197532 540 ntBASIC1.02□□□□□ -2.25
Hmgb3O54879 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
Hmgb3O54879 Mir378a-201ENSMUST00000198300 66 ntBASIC1.02□□□□□ -2.25
Hmgb3O54879 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
Hmgb3O54879 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC1.02□□□□□ -2.25
Hmgb3O54879 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
Hmgb3O54879 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC1.02□□□□□ -2.25
Hmgb3O54879 Gm23245-201ENSMUST00000083370 135 ntBASIC1.02□□□□□ -2.25
Hmgb3O54879 Mir211-201ENSMUST00000083651 106 ntBASIC1.02□□□□□ -2.25
Hmgb3O54879 Gm44114-201ENSMUST00000203270 2727 ntBASIC1.02□□□□□ -2.25
Hmgb3O54879 Gm12639-201ENSMUST00000121400 493 ntBASIC1.01□□□□□ -2.25
Hmgb3O54879 Gm11471-201ENSMUST00000121824 198 ntBASIC1.01□□□□□ -2.25
Hmgb3O54879 Mir7081-201ENSMUST00000184490 75 ntBASIC1.01□□□□□ -2.25
Hmgb3O54879 Gm18356-201ENSMUST00000185677 623 ntBASIC1.01□□□□□ -2.25
Hmgb3O54879 Gm37054-201ENSMUST00000193481 543 ntBASIC1.01□□□□□ -2.25
Hmgb3O54879 Ighv12-1-201ENSMUST00000195542 329 ntBASIC1.01□□□□□ -2.25
Hmgb3O54879 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
Hmgb3O54879 Gm42960-201ENSMUST00000202160 241 ntBASIC1.01□□□□□ -2.25
Hmgb3O54879 AC160930.1-201ENSMUST00000227194 337 ntBASIC1.01□□□□□ -2.25
Hmgb3O54879 CT025602.1-201ENSMUST00000227281 382 ntBASIC1.01□□□□□ -2.25
Hmgb3O54879 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC1.01□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms