Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm42870-201ENSMUST00000199355 3470 ntBASIC3.42□□□□□ -1.86
Pcdh1F7BJK1 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Pcdh1F7BJK1 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Pcdh1F7BJK1 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Pcdh1F7BJK1 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Pcdh1F7BJK1 Gm23472-201ENSMUST00000101806 191 ntBASIC3.42□□□□□ -1.86
Pcdh1F7BJK1 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Pcdh1F7BJK1 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Pcdh1F7BJK1 Gm24116-201ENSMUST00000103975 107 ntBASIC3.42□□□□□ -1.86
Pcdh1F7BJK1 Gm11874-201ENSMUST00000117437 130 ntBASIC3.42□□□□□ -1.86
Pcdh1F7BJK1 Gm14845-201ENSMUST00000121259 306 ntBASIC3.42□□□□□ -1.86
Pcdh1F7BJK1 Gm16250-201ENSMUST00000148974 256 ntBASIC3.42□□□□□ -1.86
Pcdh1F7BJK1 Gm22381-201ENSMUST00000158186 107 ntBASIC3.42□□□□□ -1.86
Pcdh1F7BJK1 Gm25863-201ENSMUST00000158249 329 ntBASIC3.42□□□□□ -1.86
Pcdh1F7BJK1 Gm24086-201ENSMUST00000175171 98 ntBASIC3.42□□□□□ -1.86
Pcdh1F7BJK1 Gm24497-201ENSMUST00000177868 191 ntBASIC3.42□□□□□ -1.86
Pcdh1F7BJK1 Gm6625-201ENSMUST00000177870 272 ntBASIC3.42□□□□□ -1.86
Pcdh1F7BJK1 Mir6960-201ENSMUST00000183449 61 ntBASIC3.42□□□□□ -1.86
Pcdh1F7BJK1 Gm29574-201ENSMUST00000186226 696 ntBASIC3.42□□□□□ -1.86
Pcdh1F7BJK1 Gm28828-201ENSMUST00000186601 696 ntBASIC3.42□□□□□ -1.86
Pcdh1F7BJK1 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Pcdh1F7BJK1 Gm28848-201ENSMUST00000189984 168 ntBASIC3.42□□□□□ -1.86
Pcdh1F7BJK1 Gm28159-201ENSMUST00000190296 696 ntBASIC3.42□□□□□ -1.86
Pcdh1F7BJK1 Gm5829-201ENSMUST00000191383 351 ntBASIC3.42□□□□□ -1.86
Pcdh1F7BJK1 Gm37997-201ENSMUST00000193515 267 ntBASIC3.42□□□□□ -1.86
Pcdh1F7BJK1 Gm37624-201ENSMUST00000193751 219 ntBASIC3.42□□□□□ -1.86
Pcdh1F7BJK1 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC3.42□□□□□ -1.86
Pcdh1F7BJK1 Gm19620-201ENSMUST00000195972 434 ntBASIC3.42□□□□□ -1.86
Pcdh1F7BJK1 Mir465d-201ENSMUST00000196314 58 ntBASIC3.42□□□□□ -1.86
Pcdh1F7BJK1 Gm17951-201ENSMUST00000198536 496 ntBASIC3.42□□□□□ -1.86
Pcdh1F7BJK1 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.42□□□□□ -1.86
Pcdh1F7BJK1 AC100209.2-201ENSMUST00000224461 451 ntBASIC3.42□□□□□ -1.86
Pcdh1F7BJK1 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Pcdh1F7BJK1 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Pcdh1F7BJK1 Gm23444-201ENSMUST00000082922 191 ntBASIC3.42□□□□□ -1.86
Pcdh1F7BJK1 Gm23453-201ENSMUST00000083326 106 ntBASIC3.42□□□□□ -1.86
Pcdh1F7BJK1 Mir346-201ENSMUST00000083547 98 ntBASIC3.42□□□□□ -1.86
Pcdh1F7BJK1 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Pcdh1F7BJK1 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
Pcdh1F7BJK1 AC158921.1-201ENSMUST00000227861 3468 ntBASIC3.42□□□□□ -1.86
Pcdh1F7BJK1 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
Pcdh1F7BJK1 Gm10400-201ENSMUST00000203920 3835 ntBASIC3.41□□□□□ -1.86
Pcdh1F7BJK1 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Pcdh1F7BJK1 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC3.41□□□□□ -1.86
Pcdh1F7BJK1 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
Pcdh1F7BJK1 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Pcdh1F7BJK1 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Pcdh1F7BJK1 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC3.41□□□□□ -1.86
Pcdh1F7BJK1 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Pcdh1F7BJK1 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Pcdh1F7BJK1 Gm13432-201ENSMUST00000118861 241 ntBASIC3.41□□□□□ -1.86
Pcdh1F7BJK1 Gm26026-201ENSMUST00000122726 123 ntBASIC3.41□□□□□ -1.86
Pcdh1F7BJK1 Gm23554-201ENSMUST00000157818 110 ntBASIC3.41□□□□□ -1.86
Pcdh1F7BJK1 Gm24905-201ENSMUST00000158129 104 ntBASIC3.41□□□□□ -1.86
Pcdh1F7BJK1 Gm24726-201ENSMUST00000158232 121 ntBASIC3.41□□□□□ -1.86
Pcdh1F7BJK1 Gm7241-201ENSMUST00000159853 357 ntBASIC3.41□□□□□ -1.86
Pcdh1F7BJK1 Mir3070b-201ENSMUST00000175205 89 ntBASIC3.41□□□□□ -1.86
Pcdh1F7BJK1 Gm24811-201ENSMUST00000175313 100 ntBASIC3.41□□□□□ -1.86
Pcdh1F7BJK1 Gm27535-201ENSMUST00000183814 157 ntBASIC3.41□□□□□ -1.86
Pcdh1F7BJK1 Gm28000-201ENSMUST00000184380 85 ntBASIC3.41□□□□□ -1.86
Pcdh1F7BJK1 Gm28304-201ENSMUST00000185977 312 ntBASIC3.41□□□□□ -1.86
Pcdh1F7BJK1 Gm29256-201ENSMUST00000189094 312 ntBASIC3.41□□□□□ -1.86
Pcdh1F7BJK1 Gm28484-201ENSMUST00000190606 312 ntBASIC3.41□□□□□ -1.86
Pcdh1F7BJK1 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC3.41□□□□□ -1.86
Pcdh1F7BJK1 Gm43427-201ENSMUST00000198188 331 ntBASIC3.41□□□□□ -1.86
Pcdh1F7BJK1 Gm44520-201ENSMUST00000205447 802 ntBASIC3.41□□□□□ -1.86
Pcdh1F7BJK1 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Pcdh1F7BJK1 Gm24626-201ENSMUST00000082621 161 ntBASIC3.41□□□□□ -1.86
Pcdh1F7BJK1 Gm25200-201ENSMUST00000083094 130 ntBASIC3.41□□□□□ -1.86
Pcdh1F7BJK1 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
Pcdh1F7BJK1 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.41□□□□□ -1.86
Pcdh1F7BJK1 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Pcdh1F7BJK1 Gm45662-201ENSMUST00000210054 2098 ntBASIC3.4□□□□□ -1.86
Pcdh1F7BJK1 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC3.4□□□□□ -1.86
Pcdh1F7BJK1 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
Pcdh1F7BJK1 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
Pcdh1F7BJK1 Gm25421-201ENSMUST00000104218 164 ntBASIC3.4□□□□□ -1.87
Pcdh1F7BJK1 Gm25915-201ENSMUST00000104265 126 ntBASIC3.4□□□□□ -1.87
Pcdh1F7BJK1 n-R5s219-201ENSMUST00000104328 132 ntBASIC3.4□□□□□ -1.87
Pcdh1F7BJK1 Gm14922-201ENSMUST00000121131 163 ntBASIC3.4□□□□□ -1.87
Pcdh1F7BJK1 Gm25805-201ENSMUST00000122788 108 ntBASIC3.4□□□□□ -1.87
Pcdh1F7BJK1 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Pcdh1F7BJK1 Gm24061-201ENSMUST00000157489 120 ntBASIC3.4□□□□□ -1.87
Pcdh1F7BJK1 Gm25386-201ENSMUST00000157814 288 ntBASIC3.4□□□□□ -1.87
Pcdh1F7BJK1 Gm23257-201ENSMUST00000158322 132 ntBASIC3.4□□□□□ -1.87
Pcdh1F7BJK1 Snord92-201ENSMUST00000175548 85 ntBASIC3.4□□□□□ -1.87
Pcdh1F7BJK1 Gm22395-201ENSMUST00000177427 96 ntBASIC3.4□□□□□ -1.87
Pcdh1F7BJK1 Gm25615-201ENSMUST00000177836 94 ntBASIC3.4□□□□□ -1.87
Pcdh1F7BJK1 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC3.4□□□□□ -1.87
Pcdh1F7BJK1 Gm27695-201ENSMUST00000184301 91 ntBASIC3.4□□□□□ -1.87
Pcdh1F7BJK1 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC3.4□□□□□ -1.87
Pcdh1F7BJK1 Gm37923-201ENSMUST00000191624 161 ntBASIC3.4□□□□□ -1.87
Pcdh1F7BJK1 Gm37655-201ENSMUST00000193968 4123 ntBASIC3.4□□□□□ -1.87
Pcdh1F7BJK1 Gm19244-201ENSMUST00000204340 253 ntBASIC3.4□□□□□ -1.87
Pcdh1F7BJK1 Gm45209-201ENSMUST00000207122 353 ntBASIC3.4□□□□□ -1.87
Pcdh1F7BJK1 Gm8942-201ENSMUST00000217892 400 ntBASIC3.4□□□□□ -1.87
Pcdh1F7BJK1 AC153646.2-201ENSMUST00000220516 109 ntBASIC3.4□□□□□ -1.87
Pcdh1F7BJK1 AC165138.1-201ENSMUST00000226984 270 ntBASIC3.4□□□□□ -1.87
Pcdh1F7BJK1 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
Pcdh1F7BJK1 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 98.3 ms