Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC0.37□□□□□ -2.35
Col6a3E9PWQ3 Gm7726-201ENSMUST00000206241 231 ntBASIC0.37□□□□□ -2.35
Col6a3E9PWQ3 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC0.37□□□□□ -2.35
Col6a3E9PWQ3 Gm19599-201ENSMUST00000218898 358 ntBASIC0.37□□□□□ -2.35
Col6a3E9PWQ3 Gm23629-201ENSMUST00000082465 107 ntBASIC0.37□□□□□ -2.35
Col6a3E9PWQ3 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC0.36□□□□□ -2.35
Col6a3E9PWQ3 Gm27477-201ENSMUST00000184649 143 ntBASIC0.36□□□□□ -2.35
Col6a3E9PWQ3 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
Col6a3E9PWQ3 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
Col6a3E9PWQ3 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
Col6a3E9PWQ3 Gm43043-201ENSMUST00000196579 412 ntBASIC0.36□□□□□ -2.35
Col6a3E9PWQ3 Gm44058-201ENSMUST00000204335 467 ntBASIC0.36□□□□□ -2.35
Col6a3E9PWQ3 CT010449.1-201ENSMUST00000220624 153 ntBASIC0.36□□□□□ -2.35
Col6a3E9PWQ3 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
Col6a3E9PWQ3 Gm24385-201ENSMUST00000122694 350 ntBASIC0.36□□□□□ -2.35
Col6a3E9PWQ3 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC0.36□□□□□ -2.35
Col6a3E9PWQ3 Gm2830-201ENSMUST00000140330 385 ntBASIC0.36□□□□□ -2.35
Col6a3E9PWQ3 Gm5958-201ENSMUST00000147698 297 ntBASIC0.36□□□□□ -2.35
Col6a3E9PWQ3 Gm16354-201ENSMUST00000155376 150 ntBASIC0.36□□□□□ -2.35
Col6a3E9PWQ3 Gm28257-201ENSMUST00000185244 463 ntBASIC0.36□□□□□ -2.35
Col6a3E9PWQ3 Gm38323-201ENSMUST00000192450 210 ntBASIC0.36□□□□□ -2.35
Col6a3E9PWQ3 AC125167.1-201ENSMUST00000198698 141 ntBASIC0.36□□□□□ -2.35
Col6a3E9PWQ3 Gm24319-201ENSMUST00000083389 107 ntBASIC0.36□□□□□ -2.35
Col6a3E9PWQ3 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC0.35□□□□□ -2.35
Col6a3E9PWQ3 Olfr183-205ENSMUST00000214916 2249 ntAPPRIS P1 TSL 5 BASIC0.35□□□□□ -2.35
Col6a3E9PWQ3 Gm22516-201ENSMUST00000158266 124 ntBASIC0.35□□□□□ -2.35
Col6a3E9PWQ3 Gm6607-201ENSMUST00000215035 328 ntBASIC0.35□□□□□ -2.35
Col6a3E9PWQ3 AC132384.9-201ENSMUST00000218085 277 ntBASIC0.35□□□□□ -2.35
Col6a3E9PWQ3 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC0.35□□□□□ -2.35
Col6a3E9PWQ3 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC0.35□□□□□ -2.35
Col6a3E9PWQ3 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC0.35□□□□□ -2.35
Col6a3E9PWQ3 AC153936.1-201ENSMUST00000219874 395 ntBASIC0.35□□□□□ -2.35
Col6a3E9PWQ3 Gm24152-201ENSMUST00000082764 163 ntBASIC0.35□□□□□ -2.35
Col6a3E9PWQ3 Gm5583-201ENSMUST00000174328 1519 ntBASIC0.35□□□□□ -2.35
Col6a3E9PWQ3 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC0.35□□□□□ -2.35
Col6a3E9PWQ3 Gm11813-201ENSMUST00000118586 291 ntBASIC0.35□□□□□ -2.35
Col6a3E9PWQ3 Gm22087-201ENSMUST00000158339 88 ntBASIC0.35□□□□□ -2.35
Col6a3E9PWQ3 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC0.35□□□□□ -2.35
Col6a3E9PWQ3 Gm24561-201ENSMUST00000175182 95 ntBASIC0.35□□□□□ -2.35
Col6a3E9PWQ3 Mir7043-201ENSMUST00000184219 70 ntBASIC0.35□□□□□ -2.35
Col6a3E9PWQ3 Gm44295-201ENSMUST00000203805 437 ntBASIC0.35□□□□□ -2.35
Col6a3E9PWQ3 AC162934.3-201ENSMUST00000223015 841 ntBASIC0.35□□□□□ -2.35
Col6a3E9PWQ3 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.35□□□□□ -2.35
Col6a3E9PWQ3 Mir214-201ENSMUST00000083582 110 ntBASIC0.35□□□□□ -2.35
Col6a3E9PWQ3 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.35
Col6a3E9PWQ3 Gm27717-201ENSMUST00000183933 151 ntBASIC0.34□□□□□ -2.35
Col6a3E9PWQ3 Gm44137-201ENSMUST00000203670 367 ntBASIC0.34□□□□□ -2.35
Col6a3E9PWQ3 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.35
Col6a3E9PWQ3 Gm44679-201ENSMUST00000207202 2908 ntBASIC0.34□□□□□ -2.36
Col6a3E9PWQ3 Mir710-201ENSMUST00000102088 110 ntBASIC0.34□□□□□ -2.36
Col6a3E9PWQ3 Gm8858-201ENSMUST00000118259 342 ntBASIC0.34□□□□□ -2.36
Col6a3E9PWQ3 Gm25672-201ENSMUST00000180111 107 ntBASIC0.34□□□□□ -2.36
Col6a3E9PWQ3 Gm44301-201ENSMUST00000200362 143 ntBASIC0.34□□□□□ -2.36
Col6a3E9PWQ3 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC0.33□□□□□ -2.36
Col6a3E9PWQ3 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC0.33□□□□□ -2.36
Col6a3E9PWQ3 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC0.33□□□□□ -2.36
Col6a3E9PWQ3 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC0.33□□□□□ -2.36
Col6a3E9PWQ3 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC0.33□□□□□ -2.36
Col6a3E9PWQ3 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC0.33□□□□□ -2.36
Col6a3E9PWQ3 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC0.33□□□□□ -2.36
Col6a3E9PWQ3 Gm29231-201ENSMUST00000179850 319 ntBASIC0.33□□□□□ -2.36
Col6a3E9PWQ3 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC0.33□□□□□ -2.36
Col6a3E9PWQ3 Gm44482-201ENSMUST00000199232 103 ntBASIC0.33□□□□□ -2.36
Col6a3E9PWQ3 AC147545.1-201ENSMUST00000227528 108 ntBASIC0.33□□□□□ -2.36
Col6a3E9PWQ3 Gm10092-201ENSMUST00000077110 180 ntBASIC0.33□□□□□ -2.36
Col6a3E9PWQ3 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC0.33□□□□□ -2.36
Col6a3E9PWQ3 Mndal-204ENSMUST00000188804 2026 ntAPPRIS P2 TSL 1 (best) BASIC0.33□□□□□ -2.36
Col6a3E9PWQ3 n-R5s73-201ENSMUST00000122508 107 ntBASIC0.33□□□□□ -2.36
Col6a3E9PWQ3 Gm15692-201ENSMUST00000152173 352 ntBASIC0.33□□□□□ -2.36
Col6a3E9PWQ3 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
Col6a3E9PWQ3 Gm37098-201ENSMUST00000192290 244 ntBASIC0.33□□□□□ -2.36
Col6a3E9PWQ3 Gm42475-201ENSMUST00000201212 295 ntBASIC0.33□□□□□ -2.36
Col6a3E9PWQ3 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC0.33□□□□□ -2.36
Col6a3E9PWQ3 AC153662.1-201ENSMUST00000222220 270 ntBASIC0.33□□□□□ -2.36
Col6a3E9PWQ3 AC173481.1-201ENSMUST00000223351 270 ntBASIC0.33□□□□□ -2.36
Col6a3E9PWQ3 CT010480.1-201ENSMUST00000223612 363 ntBASIC0.33□□□□□ -2.36
Col6a3E9PWQ3 Gm22537-201ENSMUST00000158172 199 ntBASIC0.33□□□□□ -2.36
Col6a3E9PWQ3 Gm29647-201ENSMUST00000188795 666 ntBASIC0.33□□□□□ -2.36
Col6a3E9PWQ3 Gm7858-201ENSMUST00000190177 622 ntBASIC0.33□□□□□ -2.36
Col6a3E9PWQ3 Gm28504-201ENSMUST00000190977 666 ntBASIC0.33□□□□□ -2.36
Col6a3E9PWQ3 Gm36989-201ENSMUST00000193225 2160 ntBASIC0.33□□□□□ -2.36
Col6a3E9PWQ3 Gm27722-201ENSMUST00000183908 76 ntBASIC0.32□□□□□ -2.36
Col6a3E9PWQ3 AC091260.1-201ENSMUST00000216112 229 ntBASIC0.32□□□□□ -2.36
Col6a3E9PWQ3 Gm15215-201ENSMUST00000117773 489 ntBASIC0.32□□□□□ -2.36
Col6a3E9PWQ3 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC0.32□□□□□ -2.36
Col6a3E9PWQ3 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
Col6a3E9PWQ3 Mir301-201ENSMUST00000083655 86 ntBASIC0.32□□□□□ -2.36
Col6a3E9PWQ3 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC0.32□□□□□ -2.36
Col6a3E9PWQ3 Gm9001-201ENSMUST00000121642 399 ntBASIC0.32□□□□□ -2.36
Col6a3E9PWQ3 Gm24725-201ENSMUST00000158229 125 ntBASIC0.32□□□□□ -2.36
Col6a3E9PWQ3 Gm37720-201ENSMUST00000195497 1241 ntBASIC0.32□□□□□ -2.36
Col6a3E9PWQ3 Gm44465-201ENSMUST00000199536 114 ntBASIC0.32□□□□□ -2.36
Col6a3E9PWQ3 CT030166.2-201ENSMUST00000222021 368 ntBASIC0.32□□□□□ -2.36
Col6a3E9PWQ3 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC0.31□□□□□ -2.36
Col6a3E9PWQ3 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC0.31□□□□□ -2.36
Col6a3E9PWQ3 Gm24085-201ENSMUST00000175172 116 ntBASIC0.31□□□□□ -2.36
Col6a3E9PWQ3 Gm44910-201ENSMUST00000208451 396 ntBASIC0.31□□□□□ -2.36
Col6a3E9PWQ3 Gm12368-201ENSMUST00000122251 434 ntBASIC0.31□□□□□ -2.36
Col6a3E9PWQ3 Gm22477-201ENSMUST00000122569 316 ntBASIC0.31□□□□□ -2.36
Col6a3E9PWQ3 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 94.1 ms