Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Snord116l5-201ENSMUST00000179927 94 ntBASIC1.46□□□□□ -2.18
Chd3B1AR17 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC1.46□□□□□ -2.18
Chd3B1AR17 Snord116l6-201ENSMUST00000179955 94 ntBASIC1.46□□□□□ -2.18
Chd3B1AR17 Gm26188-201ENSMUST00000179963 94 ntBASIC1.46□□□□□ -2.18
Chd3B1AR17 Gm26433-201ENSMUST00000180227 94 ntBASIC1.46□□□□□ -2.18
Chd3B1AR17 Snord116l11-201ENSMUST00000180312 94 ntBASIC1.46□□□□□ -2.18
Chd3B1AR17 Gm22128-201ENSMUST00000180346 94 ntBASIC1.46□□□□□ -2.18
Chd3B1AR17 Gm20058-201ENSMUST00000186939 284 ntBASIC1.46□□□□□ -2.18
Chd3B1AR17 Snord43-201ENSMUST00000199549 108 ntBASIC1.46□□□□□ -2.18
Chd3B1AR17 Gm43578-201ENSMUST00000201250 459 ntBASIC1.46□□□□□ -2.18
Chd3B1AR17 AC120540.2-201ENSMUST00000221716 387 ntBASIC1.46□□□□□ -2.18
Chd3B1AR17 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.46□□□□□ -2.18
Chd3B1AR17 Gm11854-201ENSMUST00000117839 446 ntBASIC1.46□□□□□ -2.18
Chd3B1AR17 Gm12327-201ENSMUST00000121729 1168 ntBASIC1.46□□□□□ -2.18
Chd3B1AR17 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.46□□□□□ -2.18
Chd3B1AR17 Gm23754-201ENSMUST00000157576 63 ntBASIC1.46□□□□□ -2.18
Chd3B1AR17 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC1.46□□□□□ -2.18
Chd3B1AR17 Gm42958-201ENSMUST00000197595 318 ntBASIC1.46□□□□□ -2.18
Chd3B1AR17 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC1.46□□□□□ -2.18
Chd3B1AR17 AC154692.1-201ENSMUST00000228314 544 ntBASIC1.46□□□□□ -2.18
Chd3B1AR17 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC1.46□□□□□ -2.18
Chd3B1AR17 Mir125b-2-201ENSMUST00000083538 71 ntBASIC1.46□□□□□ -2.18
Chd3B1AR17 Mir107-201ENSMUST00000083660 87 ntBASIC1.46□□□□□ -2.18
Chd3B1AR17 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Chd3B1AR17 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
Chd3B1AR17 Gm14945-201ENSMUST00000119556 1118 ntBASIC1.45□□□□□ -2.18
Chd3B1AR17 Gm11395-201ENSMUST00000181011 499 ntBASIC1.45□□□□□ -2.18
Chd3B1AR17 Gm27607-201ENSMUST00000185162 122 ntBASIC1.45□□□□□ -2.18
Chd3B1AR17 Gm28453-203ENSMUST00000187041 189 ntBASIC1.45□□□□□ -2.18
Chd3B1AR17 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.45□□□□□ -2.18
Chd3B1AR17 Gm7871-201ENSMUST00000195346 618 ntBASIC1.45□□□□□ -2.18
Chd3B1AR17 Gm43659-201ENSMUST00000200894 628 ntBASIC1.45□□□□□ -2.18
Chd3B1AR17 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC1.45□□□□□ -2.18
Chd3B1AR17 AC069561.3-201ENSMUST00000217321 114 ntBASIC1.45□□□□□ -2.18
Chd3B1AR17 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
Chd3B1AR17 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.44□□□□□ -2.18
Chd3B1AR17 Gm25213-201ENSMUST00000102388 113 ntBASIC1.44□□□□□ -2.18
Chd3B1AR17 Gm23015-201ENSMUST00000104145 128 ntBASIC1.44□□□□□ -2.18
Chd3B1AR17 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC1.44□□□□□ -2.18
Chd3B1AR17 Gm14879-201ENSMUST00000117308 507 ntBASIC1.44□□□□□ -2.18
Chd3B1AR17 Gm9703-201ENSMUST00000119573 343 ntBASIC1.44□□□□□ -2.18
Chd3B1AR17 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Chd3B1AR17 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC1.44□□□□□ -2.18
Chd3B1AR17 Gm28058-201ENSMUST00000186421 264 ntBASIC1.44□□□□□ -2.18
Chd3B1AR17 Gm37568-201ENSMUST00000191755 364 ntBASIC1.44□□□□□ -2.18
Chd3B1AR17 CT573422.1-201ENSMUST00000216655 405 ntBASIC1.44□□□□□ -2.18
Chd3B1AR17 AC124569.1-201ENSMUST00000225932 101 ntBASIC1.44□□□□□ -2.18
Chd3B1AR17 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Chd3B1AR17 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
Chd3B1AR17 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.44□□□□□ -2.18
Chd3B1AR17 Gm15084-201ENSMUST00000178585 1502 ntBASIC1.44□□□□□ -2.18
Chd3B1AR17 Gm22779-201ENSMUST00000104085 107 ntBASIC1.44□□□□□ -2.18
Chd3B1AR17 Gm23991-201ENSMUST00000117033 93 ntBASIC1.44□□□□□ -2.18
Chd3B1AR17 Gm24902-201ENSMUST00000158126 123 ntBASIC1.44□□□□□ -2.18
Chd3B1AR17 Gm27248-201ENSMUST00000184004 166 ntBASIC1.44□□□□□ -2.18
Chd3B1AR17 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.44□□□□□ -2.18
Chd3B1AR17 Mir211-201ENSMUST00000083651 106 ntBASIC1.44□□□□□ -2.18
Chd3B1AR17 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC1.44□□□□□ -2.18
Chd3B1AR17 Gm25992-201ENSMUST00000102437 109 ntBASIC1.43□□□□□ -2.18
Chd3B1AR17 Gm14932-201ENSMUST00000117112 453 ntBASIC1.43□□□□□ -2.18
Chd3B1AR17 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC1.43□□□□□ -2.18
Chd3B1AR17 Gm23332-201ENSMUST00000157424 275 ntBASIC1.43□□□□□ -2.18
Chd3B1AR17 Gm25981-201ENSMUST00000157921 295 ntBASIC1.43□□□□□ -2.18
Chd3B1AR17 Gm21758-201ENSMUST00000179336 819 ntBASIC1.43□□□□□ -2.18
Chd3B1AR17 Gm29647-201ENSMUST00000188795 666 ntBASIC1.43□□□□□ -2.18
Chd3B1AR17 Gm20832-201ENSMUST00000189076 665 ntBASIC1.43□□□□□ -2.18
Chd3B1AR17 Gm28241-201ENSMUST00000190916 235 ntBASIC1.43□□□□□ -2.18
Chd3B1AR17 Gm28504-201ENSMUST00000190977 666 ntBASIC1.43□□□□□ -2.18
Chd3B1AR17 Gm35843-201ENSMUST00000193716 666 ntBASIC1.43□□□□□ -2.18
Chd3B1AR17 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC1.43□□□□□ -2.18
Chd3B1AR17 Gm36728-201ENSMUST00000195782 665 ntBASIC1.43□□□□□ -2.18
Chd3B1AR17 Gm42672-201ENSMUST00000197821 352 ntBASIC1.43□□□□□ -2.18
Chd3B1AR17 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC1.43□□□□□ -2.18
Chd3B1AR17 AC115357.1-201ENSMUST00000227575 466 ntBASIC1.43□□□□□ -2.18
Chd3B1AR17 Gm42635-201ENSMUST00000200266 2571 ntBASIC1.43□□□□□ -2.18
Chd3B1AR17 Gm36989-201ENSMUST00000193225 2160 ntBASIC1.43□□□□□ -2.18
Chd3B1AR17 Gm24579-201ENSMUST00000103964 144 ntBASIC1.43□□□□□ -2.18
Chd3B1AR17 Gm13482-201ENSMUST00000119842 254 ntBASIC1.43□□□□□ -2.18
Chd3B1AR17 Gm13602-201ENSMUST00000122405 493 ntBASIC1.43□□□□□ -2.18
Chd3B1AR17 Gm24836-201ENSMUST00000122609 108 ntBASIC1.43□□□□□ -2.18
Chd3B1AR17 n-R5s216-201ENSMUST00000122755 112 ntBASIC1.43□□□□□ -2.18
Chd3B1AR17 Gm22843-201ENSMUST00000157710 134 ntBASIC1.43□□□□□ -2.18
Chd3B1AR17 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Chd3B1AR17 Gm24100-201ENSMUST00000178592 79 ntBASIC1.43□□□□□ -2.18
Chd3B1AR17 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Chd3B1AR17 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Chd3B1AR17 Gm27428-201ENSMUST00000184289 110 ntBASIC1.43□□□□□ -2.18
Chd3B1AR17 Gm18775-201ENSMUST00000190763 586 ntBASIC1.43□□□□□ -2.18
Chd3B1AR17 Gm43007-201ENSMUST00000197618 291 ntBASIC1.43□□□□□ -2.18
Chd3B1AR17 Gm43171-201ENSMUST00000199882 291 ntBASIC1.43□□□□□ -2.18
Chd3B1AR17 Gm44024-201ENSMUST00000203008 476 ntBASIC1.43□□□□□ -2.18
Chd3B1AR17 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC1.43□□□□□ -2.18
Chd3B1AR17 Gm381-201ENSMUST00000117443 2037 ntBASIC1.42□□□□□ -2.18
Chd3B1AR17 Gm15312-201ENSMUST00000118827 271 ntBASIC1.42□□□□□ -2.18
Chd3B1AR17 Gm15309-201ENSMUST00000121644 240 ntBASIC1.42□□□□□ -2.18
Chd3B1AR17 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC1.42□□□□□ -2.18
Chd3B1AR17 Gm26414-201ENSMUST00000157674 269 ntBASIC1.42□□□□□ -2.18
Chd3B1AR17 Gm3102-201ENSMUST00000164236 489 ntBASIC1.42□□□□□ -2.18
Chd3B1AR17 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC1.42□□□□□ -2.18
Chd3B1AR17 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC1.42□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms