Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
Trav4-3A0A0B4J1K1 Gm22759-201ENSMUST00000102276 96 ntBASIC0.26□□□□□ -2.37
Trav4-3A0A0B4J1K1 Gm23951-201ENSMUST00000104029 132 ntBASIC0.26□□□□□ -2.37
Trav4-3A0A0B4J1K1 Gm12096-201ENSMUST00000121149 829 ntBASIC0.26□□□□□ -2.37
Trav4-3A0A0B4J1K1 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
Trav4-3A0A0B4J1K1 Gm28755-201ENSMUST00000185773 199 ntBASIC0.26□□□□□ -2.37
Trav4-3A0A0B4J1K1 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC0.26□□□□□ -2.37
Trav4-3A0A0B4J1K1 Gm44041-201ENSMUST00000203678 396 ntBASIC0.26□□□□□ -2.37
Trav4-3A0A0B4J1K1 Gm45226-201ENSMUST00000206602 288 ntBASIC0.26□□□□□ -2.37
Trav4-3A0A0B4J1K1 AC172027.1-201ENSMUST00000217659 337 ntBASIC0.26□□□□□ -2.37
Trav4-3A0A0B4J1K1 Gm2628-201ENSMUST00000218019 426 ntBASIC0.26□□□□□ -2.37
Trav4-3A0A0B4J1K1 AC112935.1-201ENSMUST00000227603 250 ntBASIC0.26□□□□□ -2.37
Trav4-3A0A0B4J1K1 n-R5s37-201ENSMUST00000082533 118 ntBASIC0.26□□□□□ -2.37
Trav4-3A0A0B4J1K1 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC0.25□□□□□ -2.37
Trav4-3A0A0B4J1K1 AC134917.1-201ENSMUST00000220517 1449 ntBASIC0.25□□□□□ -2.37
Trav4-3A0A0B4J1K1 Mir695-201ENSMUST00000102261 109 ntBASIC0.25□□□□□ -2.37
Trav4-3A0A0B4J1K1 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC0.25□□□□□ -2.37
Trav4-3A0A0B4J1K1 Gm15714-201ENSMUST00000117168 250 ntBASIC0.25□□□□□ -2.37
Trav4-3A0A0B4J1K1 Gm23792-201ENSMUST00000122557 93 ntBASIC0.25□□□□□ -2.37
Trav4-3A0A0B4J1K1 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC0.25□□□□□ -2.37
Trav4-3A0A0B4J1K1 Gm19649-201ENSMUST00000201126 822 ntBASIC0.25□□□□□ -2.37
Trav4-3A0A0B4J1K1 Gm42960-201ENSMUST00000202160 241 ntBASIC0.25□□□□□ -2.37
Trav4-3A0A0B4J1K1 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC0.25□□□□□ -2.37
Trav4-3A0A0B4J1K1 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC0.25□□□□□ -2.37
Trav4-3A0A0B4J1K1 Gm22299-201ENSMUST00000082663 136 ntBASIC0.25□□□□□ -2.37
Trav4-3A0A0B4J1K1 Mir221-201ENSMUST00000083488 95 ntBASIC0.25□□□□□ -2.37
Trav4-3A0A0B4J1K1 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC0.25□□□□□ -2.37
Trav4-3A0A0B4J1K1 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
Trav4-3A0A0B4J1K1 Gm24382-201ENSMUST00000122698 107 ntBASIC0.24□□□□□ -2.37
Trav4-3A0A0B4J1K1 Gm26038-201ENSMUST00000158151 106 ntBASIC0.24□□□□□ -2.37
Trav4-3A0A0B4J1K1 Gm22527-201ENSMUST00000158816 106 ntBASIC0.24□□□□□ -2.37
Trav4-3A0A0B4J1K1 Gm37989-201ENSMUST00000195202 803 ntBASIC0.24□□□□□ -2.37
Trav4-3A0A0B4J1K1 Gm44462-201ENSMUST00000199696 129 ntBASIC0.24□□□□□ -2.37
Trav4-3A0A0B4J1K1 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC0.24□□□□□ -2.37
Trav4-3A0A0B4J1K1 Gm44524-201ENSMUST00000203899 271 ntBASIC0.24□□□□□ -2.37
Trav4-3A0A0B4J1K1 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC0.24□□□□□ -2.37
Trav4-3A0A0B4J1K1 Gm18039-201ENSMUST00000217816 728 ntBASIC0.24□□□□□ -2.37
Trav4-3A0A0B4J1K1 AC147240.1-201ENSMUST00000218767 431 ntBASIC0.24□□□□□ -2.37
Trav4-3A0A0B4J1K1 AC159709.1-201ENSMUST00000220445 349 ntBASIC0.24□□□□□ -2.37
Trav4-3A0A0B4J1K1 AC134860.6-201ENSMUST00000226038 285 ntBASIC0.24□□□□□ -2.37
Trav4-3A0A0B4J1K1 Mir362-201ENSMUST00000093592 65 ntBASIC0.24□□□□□ -2.37
Trav4-3A0A0B4J1K1 Gm22750-201ENSMUST00000102076 103 ntBASIC0.23□□□□□ -2.37
Trav4-3A0A0B4J1K1 Gm25376-201ENSMUST00000104340 133 ntBASIC0.23□□□□□ -2.37
Trav4-3A0A0B4J1K1 Gm12053-201ENSMUST00000119022 252 ntBASIC0.23□□□□□ -2.37
Trav4-3A0A0B4J1K1 Fau-ps1-201ENSMUST00000119675 252 ntBASIC0.23□□□□□ -2.37
Trav4-3A0A0B4J1K1 Gm15861-201ENSMUST00000120979 339 ntBASIC0.23□□□□□ -2.37
Trav4-3A0A0B4J1K1 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
Trav4-3A0A0B4J1K1 Gm23329-201ENSMUST00000157415 108 ntBASIC0.23□□□□□ -2.37
Trav4-3A0A0B4J1K1 Gm24601-201ENSMUST00000157970 143 ntBASIC0.23□□□□□ -2.37
Trav4-3A0A0B4J1K1 Gm24885-201ENSMUST00000158783 270 ntBASIC0.23□□□□□ -2.37
Trav4-3A0A0B4J1K1 Gm2966-201ENSMUST00000166052 481 ntBASIC0.23□□□□□ -2.37
Trav4-3A0A0B4J1K1 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC0.23□□□□□ -2.37
Trav4-3A0A0B4J1K1 Gm24154-201ENSMUST00000175261 130 ntBASIC0.23□□□□□ -2.37
Trav4-3A0A0B4J1K1 Gm8151-201ENSMUST00000184817 871 ntBASIC0.23□□□□□ -2.37
Trav4-3A0A0B4J1K1 Gm5329-201ENSMUST00000186898 463 ntBASIC0.23□□□□□ -2.37
Trav4-3A0A0B4J1K1 Gm36956-201ENSMUST00000193830 214 ntBASIC0.23□□□□□ -2.37
Trav4-3A0A0B4J1K1 Gm37002-201ENSMUST00000194560 373 ntBASIC0.23□□□□□ -2.37
Trav4-3A0A0B4J1K1 Gm43432-201ENSMUST00000196352 121 ntBASIC0.23□□□□□ -2.37
Trav4-3A0A0B4J1K1 Gm42739-201ENSMUST00000200687 226 ntBASIC0.23□□□□□ -2.37
Trav4-3A0A0B4J1K1 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC0.23□□□□□ -2.37
Trav4-3A0A0B4J1K1 AC158598.2-201ENSMUST00000213397 3832 ntBASIC0.23□□□□□ -2.37
Trav4-3A0A0B4J1K1 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC0.23□□□□□ -2.37
Trav4-3A0A0B4J1K1 Gm18617-201ENSMUST00000222311 259 ntBASIC0.23□□□□□ -2.37
Trav4-3A0A0B4J1K1 AC133517.1-203ENSMUST00000225570 390 ntBASIC0.23□□□□□ -2.37
Trav4-3A0A0B4J1K1 AC154328.1-201ENSMUST00000225875 307 ntBASIC0.23□□□□□ -2.37
Trav4-3A0A0B4J1K1 Gm26224-201ENSMUST00000082506 80 ntBASIC0.23□□□□□ -2.37
Trav4-3A0A0B4J1K1 Gm25578-201ENSMUST00000083406 104 ntBASIC0.23□□□□□ -2.37
Trav4-3A0A0B4J1K1 Gm24494-201ENSMUST00000083804 81 ntBASIC0.23□□□□□ -2.37
Trav4-3A0A0B4J1K1 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC0.22□□□□□ -2.37
Trav4-3A0A0B4J1K1 Gm24079-201ENSMUST00000104352 132 ntBASIC0.22□□□□□ -2.37
Trav4-3A0A0B4J1K1 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC0.22□□□□□ -2.37
Trav4-3A0A0B4J1K1 Gm15162-201ENSMUST00000119325 283 ntBASIC0.22□□□□□ -2.37
Trav4-3A0A0B4J1K1 Gm22478-201ENSMUST00000122570 154 ntBASIC0.22□□□□□ -2.37
Trav4-3A0A0B4J1K1 Gm26152-201ENSMUST00000157427 101 ntBASIC0.22□□□□□ -2.37
Trav4-3A0A0B4J1K1 Gm25666-201ENSMUST00000157702 107 ntBASIC0.22□□□□□ -2.37
Trav4-3A0A0B4J1K1 Gm22075-201ENSMUST00000158599 192 ntBASIC0.22□□□□□ -2.37
Trav4-3A0A0B4J1K1 Gm23355-201ENSMUST00000177614 107 ntBASIC0.22□□□□□ -2.37
Trav4-3A0A0B4J1K1 Gm24968-201ENSMUST00000179817 107 ntBASIC0.22□□□□□ -2.37
Trav4-3A0A0B4J1K1 Gm37576-201ENSMUST00000194228 372 ntBASIC0.22□□□□□ -2.37
Trav4-3A0A0B4J1K1 Gm37399-201ENSMUST00000195224 416 ntBASIC0.22□□□□□ -2.37
Trav4-3A0A0B4J1K1 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC0.22□□□□□ -2.37
Trav4-3A0A0B4J1K1 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC0.22□□□□□ -2.37
Trav4-3A0A0B4J1K1 AC160863.1-201ENSMUST00000218412 317 ntBASIC0.22□□□□□ -2.37
Trav4-3A0A0B4J1K1 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC0.22□□□□□ -2.37
Trav4-3A0A0B4J1K1 Gm26439-201ENSMUST00000082592 106 ntBASIC0.22□□□□□ -2.37
Trav4-3A0A0B4J1K1 Gm24948-201ENSMUST00000082866 207 ntBASIC0.22□□□□□ -2.37
Trav4-3A0A0B4J1K1 Gm23721-201ENSMUST00000083005 107 ntBASIC0.22□□□□□ -2.37
Trav4-3A0A0B4J1K1 Gm22785-201ENSMUST00000104087 132 ntBASIC0.21□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm24588-201ENSMUST00000116696 83 ntBASIC0.21□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm13359-201ENSMUST00000119000 695 ntBASIC0.21□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm12432-201ENSMUST00000119540 186 ntBASIC0.21□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm14629-201ENSMUST00000122428 144 ntBASIC0.21□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC0.21□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm25026-201ENSMUST00000175017 188 ntBASIC0.21□□□□□ -2.38
Trav4-3A0A0B4J1K1 Mir6388-201ENSMUST00000184417 75 ntBASIC0.21□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm27588-201ENSMUST00000185096 263 ntBASIC0.21□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm19891-201ENSMUST00000189771 303 ntBASIC0.21□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm34015-201ENSMUST00000194908 451 ntBASIC0.21□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC0.21□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm18488-201ENSMUST00000215082 364 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms