Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Gm22485-201ENSMUST00000157990 109 ntBASIC0.86□□□□□ -2.27
Trbv16A0A0B4J1H3 Gm22074-201ENSMUST00000158595 113 ntBASIC0.86□□□□□ -2.27
Trbv16A0A0B4J1H3 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
Trbv16A0A0B4J1H3 Gm21726-201ENSMUST00000179654 392 ntBASIC0.86□□□□□ -2.27
Trbv16A0A0B4J1H3 Gm27517-201ENSMUST00000184347 236 ntBASIC0.86□□□□□ -2.27
Trbv16A0A0B4J1H3 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC0.86□□□□□ -2.27
Trbv16A0A0B4J1H3 AC123062.1-201ENSMUST00000221287 481 ntBASIC0.86□□□□□ -2.27
Trbv16A0A0B4J1H3 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC0.86□□□□□ -2.27
Trbv16A0A0B4J1H3 CT025602.1-201ENSMUST00000227281 382 ntBASIC0.86□□□□□ -2.27
Trbv16A0A0B4J1H3 Mir211-201ENSMUST00000083651 106 ntBASIC0.86□□□□□ -2.27
Trbv16A0A0B4J1H3 Olfr575-201ENSMUST00000084812 957 ntBASIC0.86□□□□□ -2.27
Trbv16A0A0B4J1H3 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
Trbv16A0A0B4J1H3 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC0.85□□□□□ -2.27
Trbv16A0A0B4J1H3 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC0.85□□□□□ -2.27
Trbv16A0A0B4J1H3 Gm381-201ENSMUST00000117443 2037 ntBASIC0.85□□□□□ -2.27
Trbv16A0A0B4J1H3 Mir1904-201ENSMUST00000122702 80 ntBASIC0.85□□□□□ -2.27
Trbv16A0A0B4J1H3 Gm24915-201ENSMUST00000157288 78 ntBASIC0.85□□□□□ -2.27
Trbv16A0A0B4J1H3 Gm24229-201ENSMUST00000158830 118 ntBASIC0.85□□□□□ -2.27
Trbv16A0A0B4J1H3 Gm25831-201ENSMUST00000158924 163 ntBASIC0.85□□□□□ -2.27
Trbv16A0A0B4J1H3 Mir7091-201ENSMUST00000184075 79 ntBASIC0.85□□□□□ -2.27
Trbv16A0A0B4J1H3 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC0.85□□□□□ -2.27
Trbv16A0A0B4J1H3 Gm37005-201ENSMUST00000193281 1164 ntBASIC0.85□□□□□ -2.27
Trbv16A0A0B4J1H3 Gm38154-201ENSMUST00000195444 340 ntBASIC0.85□□□□□ -2.27
Trbv16A0A0B4J1H3 Gm42647-201ENSMUST00000195939 459 ntBASIC0.85□□□□□ -2.27
Trbv16A0A0B4J1H3 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC0.85□□□□□ -2.27
Trbv16A0A0B4J1H3 Gm31230-201ENSMUST00000199725 785 ntBASIC0.85□□□□□ -2.27
Trbv16A0A0B4J1H3 Gm43199-201ENSMUST00000200019 307 ntBASIC0.85□□□□□ -2.27
Trbv16A0A0B4J1H3 Gm42960-201ENSMUST00000202160 241 ntBASIC0.85□□□□□ -2.27
Trbv16A0A0B4J1H3 Gm44654-201ENSMUST00000208052 329 ntBASIC0.85□□□□□ -2.27
Trbv16A0A0B4J1H3 AC188459.1-201ENSMUST00000216651 300 ntBASIC0.85□□□□□ -2.27
Trbv16A0A0B4J1H3 Gm26265-201ENSMUST00000083277 135 ntBASIC0.85□□□□□ -2.27
Trbv16A0A0B4J1H3 Gm22974-201ENSMUST00000083301 103 ntBASIC0.85□□□□□ -2.27
Trbv16A0A0B4J1H3 Gm26166-201ENSMUST00000083788 107 ntBASIC0.85□□□□□ -2.27
Trbv16A0A0B4J1H3 Gm16261-201ENSMUST00000096813 205 ntBASIC0.85□□□□□ -2.27
Trbv16A0A0B4J1H3 Gm44240-201ENSMUST00000204015 2654 ntBASIC0.85□□□□□ -2.27
Trbv16A0A0B4J1H3 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.27
Trbv16A0A0B4J1H3 Gm12636-201ENSMUST00000117395 624 ntBASIC0.84□□□□□ -2.27
Trbv16A0A0B4J1H3 Gm12372-201ENSMUST00000121654 768 ntBASIC0.84□□□□□ -2.27
Trbv16A0A0B4J1H3 Gm8121-201ENSMUST00000153583 499 ntBASIC0.84□□□□□ -2.27
Trbv16A0A0B4J1H3 Gm24419-201ENSMUST00000157875 332 ntBASIC0.84□□□□□ -2.27
Trbv16A0A0B4J1H3 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC0.84□□□□□ -2.27
Trbv16A0A0B4J1H3 Mir3057-201ENSMUST00000175040 91 ntBASIC0.84□□□□□ -2.27
Trbv16A0A0B4J1H3 Gm25069-201ENSMUST00000175238 86 ntBASIC0.84□□□□□ -2.27
Trbv16A0A0B4J1H3 Mir3103-201ENSMUST00000175474 67 ntBASIC0.84□□□□□ -2.27
Trbv16A0A0B4J1H3 Mir7026-201ENSMUST00000184384 67 ntBASIC0.84□□□□□ -2.27
Trbv16A0A0B4J1H3 Gm28437-201ENSMUST00000190277 783 ntBASIC0.84□□□□□ -2.27
Trbv16A0A0B4J1H3 Gm29288-201ENSMUST00000191582 901 ntBASIC0.84□□□□□ -2.27
Trbv16A0A0B4J1H3 Ighv1-46-201ENSMUST00000193988 351 ntBASIC0.84□□□□□ -2.27
Trbv16A0A0B4J1H3 Gm37102-201ENSMUST00000195740 1105 ntBASIC0.84□□□□□ -2.27
Trbv16A0A0B4J1H3 Mir3961-201ENSMUST00000198795 59 ntBASIC0.84□□□□□ -2.27
Trbv16A0A0B4J1H3 Gm43232-201ENSMUST00000201346 364 ntBASIC0.84□□□□□ -2.27
Trbv16A0A0B4J1H3 AL669916.3-201ENSMUST00000213855 94 ntBASIC0.84□□□□□ -2.27
Trbv16A0A0B4J1H3 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC0.84□□□□□ -2.27
Trbv16A0A0B4J1H3 AL669916.6-201ENSMUST00000214610 94 ntBASIC0.84□□□□□ -2.27
Trbv16A0A0B4J1H3 AL669916.4-201ENSMUST00000215976 94 ntBASIC0.84□□□□□ -2.27
Trbv16A0A0B4J1H3 AL669916.1-201ENSMUST00000217640 94 ntBASIC0.84□□□□□ -2.27
Trbv16A0A0B4J1H3 AC138401.1-201ENSMUST00000221533 116 ntBASIC0.84□□□□□ -2.27
Trbv16A0A0B4J1H3 AC154552.5-201ENSMUST00000222352 207 ntBASIC0.84□□□□□ -2.27
Trbv16A0A0B4J1H3 Gm24622-201ENSMUST00000082619 162 ntBASIC0.84□□□□□ -2.27
Trbv16A0A0B4J1H3 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC0.84□□□□□ -2.27
Trbv16A0A0B4J1H3 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.28
Trbv16A0A0B4J1H3 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.28
Trbv16A0A0B4J1H3 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
Trbv16A0A0B4J1H3 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
Trbv16A0A0B4J1H3 Gm23010-201ENSMUST00000104151 126 ntBASIC0.83□□□□□ -2.28
Trbv16A0A0B4J1H3 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
Trbv16A0A0B4J1H3 Gm22678-201ENSMUST00000116974 101 ntBASIC0.83□□□□□ -2.28
Trbv16A0A0B4J1H3 Gm13378-201ENSMUST00000117483 336 ntBASIC0.83□□□□□ -2.28
Trbv16A0A0B4J1H3 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC0.83□□□□□ -2.28
Trbv16A0A0B4J1H3 Gm14600-201ENSMUST00000121032 630 ntBASIC0.83□□□□□ -2.28
Trbv16A0A0B4J1H3 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC0.83□□□□□ -2.28
Trbv16A0A0B4J1H3 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC0.83□□□□□ -2.28
Trbv16A0A0B4J1H3 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC0.83□□□□□ -2.28
Trbv16A0A0B4J1H3 Gm6182-201ENSMUST00000156439 1208 ntBASIC0.83□□□□□ -2.28
Trbv16A0A0B4J1H3 Gm23983-201ENSMUST00000157142 114 ntBASIC0.83□□□□□ -2.28
Trbv16A0A0B4J1H3 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC0.83□□□□□ -2.28
Trbv16A0A0B4J1H3 Gm24573-201ENSMUST00000175499 112 ntBASIC0.83□□□□□ -2.28
Trbv16A0A0B4J1H3 Gm25020-201ENSMUST00000178071 107 ntBASIC0.83□□□□□ -2.28
Trbv16A0A0B4J1H3 Mir7017-201ENSMUST00000184894 62 ntBASIC0.83□□□□□ -2.28
Trbv16A0A0B4J1H3 Gm37162-201ENSMUST00000191708 551 ntBASIC0.83□□□□□ -2.28
Trbv16A0A0B4J1H3 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC0.83□□□□□ -2.28
Trbv16A0A0B4J1H3 Mir3068-202ENSMUST00000197755 79 ntBASIC0.83□□□□□ -2.28
Trbv16A0A0B4J1H3 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
Trbv16A0A0B4J1H3 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC0.83□□□□□ -2.28
Trbv16A0A0B4J1H3 AC133517.1-203ENSMUST00000225570 390 ntBASIC0.83□□□□□ -2.28
Trbv16A0A0B4J1H3 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
Trbv16A0A0B4J1H3 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC0.83□□□□□ -2.28
Trbv16A0A0B4J1H3 AC133934.2-201ENSMUST00000221729 4129 ntBASIC0.83□□□□□ -2.28
Trbv16A0A0B4J1H3 Gm43924-201ENSMUST00000204851 1736 ntBASIC0.82□□□□□ -2.28
Trbv16A0A0B4J1H3 Gm14823-201ENSMUST00000117698 238 ntBASIC0.82□□□□□ -2.28
Trbv16A0A0B4J1H3 Gm15452-201ENSMUST00000119877 240 ntBASIC0.82□□□□□ -2.28
Trbv16A0A0B4J1H3 Gm12825-201ENSMUST00000120249 563 ntBASIC0.82□□□□□ -2.28
Trbv16A0A0B4J1H3 Gm15878-201ENSMUST00000127561 306 ntBASIC0.82□□□□□ -2.28
Trbv16A0A0B4J1H3 Gm24777-201ENSMUST00000157644 107 ntBASIC0.82□□□□□ -2.28
Trbv16A0A0B4J1H3 Gm23587-201ENSMUST00000157658 84 ntBASIC0.82□□□□□ -2.28
Trbv16A0A0B4J1H3 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC0.82□□□□□ -2.28
Trbv16A0A0B4J1H3 Gm21978-201ENSMUST00000179696 377 ntBASIC0.82□□□□□ -2.28
Trbv16A0A0B4J1H3 Mir6917-201ENSMUST00000184111 61 ntBASIC0.82□□□□□ -2.28
Trbv16A0A0B4J1H3 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC0.82□□□□□ -2.28
Trbv16A0A0B4J1H3 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
Retrieved 100 of 76,532 protein–RNA pairs in 97.5 ms