Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
Trav4n-4A0A075B615 Gm7837-201ENSMUST00000190873 412 ntBASIC0.52□□□□□ -2.33
Trav4n-4A0A075B615 Gm28241-201ENSMUST00000190916 235 ntBASIC0.52□□□□□ -2.33
Trav4n-4A0A075B615 Gm28504-201ENSMUST00000190977 666 ntBASIC0.52□□□□□ -2.33
Trav4n-4A0A075B615 Gm35843-201ENSMUST00000193716 666 ntBASIC0.52□□□□□ -2.33
Trav4n-4A0A075B615 Gm37002-201ENSMUST00000194560 373 ntBASIC0.52□□□□□ -2.33
Trav4n-4A0A075B615 Gm37743-201ENSMUST00000194645 376 ntBASIC0.52□□□□□ -2.33
Trav4n-4A0A075B615 Gm36728-201ENSMUST00000195782 665 ntBASIC0.52□□□□□ -2.33
Trav4n-4A0A075B615 Gm43510-201ENSMUST00000197922 353 ntBASIC0.52□□□□□ -2.33
Trav4n-4A0A075B615 Mir378a-201ENSMUST00000198300 66 ntBASIC0.52□□□□□ -2.33
Trav4n-4A0A075B615 Mir3961-201ENSMUST00000198795 59 ntBASIC0.52□□□□□ -2.33
Trav4n-4A0A075B615 Gm45654-201ENSMUST00000210980 123 ntBASIC0.52□□□□□ -2.33
Trav4n-4A0A075B615 AC091260.1-201ENSMUST00000216112 229 ntBASIC0.52□□□□□ -2.33
Trav4n-4A0A075B615 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
Trav4n-4A0A075B615 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC0.52□□□□□ -2.33
Trav4n-4A0A075B615 AC158521.1-201ENSMUST00000225295 660 ntBASIC0.52□□□□□ -2.33
Trav4n-4A0A075B615 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
Trav4n-4A0A075B615 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
Trav4n-4A0A075B615 Gm42721-201ENSMUST00000197165 1523 ntBASIC0.52□□□□□ -2.33
Trav4n-4A0A075B615 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC0.52□□□□□ -2.33
Trav4n-4A0A075B615 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC0.51□□□□□ -2.33
Trav4n-4A0A075B615 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC0.51□□□□□ -2.33
Trav4n-4A0A075B615 Gm14879-201ENSMUST00000117308 507 ntBASIC0.51□□□□□ -2.33
Trav4n-4A0A075B615 Gm15861-201ENSMUST00000120979 339 ntBASIC0.51□□□□□ -2.33
Trav4n-4A0A075B615 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC0.51□□□□□ -2.33
Trav4n-4A0A075B615 Gm22731-201ENSMUST00000158086 94 ntBASIC0.51□□□□□ -2.33
Trav4n-4A0A075B615 Gm24902-201ENSMUST00000158126 123 ntBASIC0.51□□□□□ -2.33
Trav4n-4A0A075B615 Gm22611-201ENSMUST00000158288 150 ntBASIC0.51□□□□□ -2.33
Trav4n-4A0A075B615 Gm22164-201ENSMUST00000158413 106 ntBASIC0.51□□□□□ -2.33
Trav4n-4A0A075B615 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC0.51□□□□□ -2.33
Trav4n-4A0A075B615 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC0.51□□□□□ -2.33
Trav4n-4A0A075B615 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC0.51□□□□□ -2.33
Trav4n-4A0A075B615 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC0.51□□□□□ -2.33
Trav4n-4A0A075B615 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC0.51□□□□□ -2.33
Trav4n-4A0A075B615 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC0.51□□□□□ -2.33
Trav4n-4A0A075B615 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC0.51□□□□□ -2.33
Trav4n-4A0A075B615 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC0.51□□□□□ -2.33
Trav4n-4A0A075B615 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC0.51□□□□□ -2.33
Trav4n-4A0A075B615 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC0.51□□□□□ -2.33
Trav4n-4A0A075B615 Gm9402-201ENSMUST00000196849 388 ntBASIC0.51□□□□□ -2.33
Trav4n-4A0A075B615 Gm44844-201ENSMUST00000207242 336 ntBASIC0.51□□□□□ -2.33
Trav4n-4A0A075B615 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC0.51□□□□□ -2.33
Trav4n-4A0A075B615 Gm21089-201ENSMUST00000215843 325 ntBASIC0.51□□□□□ -2.33
Trav4n-4A0A075B615 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
Trav4n-4A0A075B615 AC134917.1-201ENSMUST00000220517 1449 ntBASIC0.51□□□□□ -2.33
Trav4n-4A0A075B615 AC154521.1-201ENSMUST00000222635 330 ntBASIC0.51□□□□□ -2.33
Trav4n-4A0A075B615 AC158142.3-201ENSMUST00000226230 675 ntBASIC0.51□□□□□ -2.33
Trav4n-4A0A075B615 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC0.51□□□□□ -2.33
Trav4n-4A0A075B615 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
Trav4n-4A0A075B615 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC0.5□□□□□ -2.33
Trav4n-4A0A075B615 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
Trav4n-4A0A075B615 Gm22780-201ENSMUST00000104084 132 ntBASIC0.5□□□□□ -2.33
Trav4n-4A0A075B615 Gm15309-201ENSMUST00000121644 240 ntBASIC0.5□□□□□ -2.33
Trav4n-4A0A075B615 Gm15214-201ENSMUST00000122155 470 ntBASIC0.5□□□□□ -2.33
Trav4n-4A0A075B615 Gm24854-201ENSMUST00000158025 98 ntBASIC0.5□□□□□ -2.33
Trav4n-4A0A075B615 Gm3025-201ENSMUST00000163454 489 ntBASIC0.5□□□□□ -2.33
Trav4n-4A0A075B615 Gm3111-201ENSMUST00000167426 490 ntBASIC0.5□□□□□ -2.33
Trav4n-4A0A075B615 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC0.5□□□□□ -2.33
Trav4n-4A0A075B615 Gm20386-201ENSMUST00000174010 132 ntBASIC0.5□□□□□ -2.33
Trav4n-4A0A075B615 Gm20630-201ENSMUST00000177387 551 ntBASIC0.5□□□□□ -2.33
Trav4n-4A0A075B615 Mir6388-201ENSMUST00000184417 75 ntBASIC0.5□□□□□ -2.33
Trav4n-4A0A075B615 Mir6926-201ENSMUST00000184562 68 ntBASIC0.5□□□□□ -2.33
Trav4n-4A0A075B615 Mir7226-201ENSMUST00000184953 60 ntBASIC0.5□□□□□ -2.33
Trav4n-4A0A075B615 Trbv22-201ENSMUST00000191697 291 ntBASIC0.5□□□□□ -2.33
Trav4n-4A0A075B615 Gm38154-201ENSMUST00000195444 340 ntBASIC0.5□□□□□ -2.33
Trav4n-4A0A075B615 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC0.5□□□□□ -2.33
Trav4n-4A0A075B615 Gm9377-201ENSMUST00000207227 623 ntBASIC0.5□□□□□ -2.33
Trav4n-4A0A075B615 AC160863.1-201ENSMUST00000218412 317 ntBASIC0.5□□□□□ -2.33
Trav4n-4A0A075B615 AC102352.1-201ENSMUST00000224187 582 ntBASIC0.5□□□□□ -2.33
Trav4n-4A0A075B615 AC112935.1-201ENSMUST00000227603 250 ntBASIC0.5□□□□□ -2.33
Trav4n-4A0A075B615 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
Trav4n-4A0A075B615 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
Trav4n-4A0A075B615 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
Trav4n-4A0A075B615 Gm26265-201ENSMUST00000083277 135 ntBASIC0.5□□□□□ -2.33
Trav4n-4A0A075B615 Snord35a-201ENSMUST00000083884 90 ntBASIC0.5□□□□□ -2.33
Trav4n-4A0A075B615 Gm25257-201ENSMUST00000083907 110 ntBASIC0.5□□□□□ -2.33
Trav4n-4A0A075B615 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
Trav4n-4A0A075B615 Gm23705-201ENSMUST00000104370 130 ntBASIC0.49□□□□□ -2.33
Trav4n-4A0A075B615 Gm23336-201ENSMUST00000117023 123 ntBASIC0.49□□□□□ -2.33
Trav4n-4A0A075B615 Gm22452-201ENSMUST00000122804 104 ntBASIC0.49□□□□□ -2.33
Trav4n-4A0A075B615 Gm22277-201ENSMUST00000157204 277 ntBASIC0.49□□□□□ -2.33
Trav4n-4A0A075B615 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC0.49□□□□□ -2.33
Trav4n-4A0A075B615 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC0.49□□□□□ -2.33
Trav4n-4A0A075B615 Gm25243-201ENSMUST00000174912 207 ntBASIC0.49□□□□□ -2.33
Trav4n-4A0A075B615 Mir28b-201ENSMUST00000175399 80 ntBASIC0.49□□□□□ -2.33
Trav4n-4A0A075B615 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC0.49□□□□□ -2.33
Trav4n-4A0A075B615 Gm27660-201ENSMUST00000184028 208 ntBASIC0.49□□□□□ -2.33
Trav4n-4A0A075B615 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
Trav4n-4A0A075B615 Gm37098-201ENSMUST00000192290 244 ntBASIC0.49□□□□□ -2.33
Trav4n-4A0A075B615 Gm37989-201ENSMUST00000195202 803 ntBASIC0.49□□□□□ -2.33
Trav4n-4A0A075B615 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC0.49□□□□□ -2.33
Trav4n-4A0A075B615 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC0.49□□□□□ -2.33
Trav4n-4A0A075B615 Gm45150-201ENSMUST00000206051 467 ntBASIC0.49□□□□□ -2.33
Trav4n-4A0A075B615 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC0.49□□□□□ -2.33
Trav4n-4A0A075B615 AC122901.2-201ENSMUST00000216926 285 ntBASIC0.49□□□□□ -2.33
Trav4n-4A0A075B615 Gm18039-201ENSMUST00000217816 728 ntBASIC0.49□□□□□ -2.33
Trav4n-4A0A075B615 AL590614.1-201ENSMUST00000226037 268 ntBASIC0.49□□□□□ -2.33
Trav4n-4A0A075B615 Gm22061-201ENSMUST00000082557 107 ntBASIC0.49□□□□□ -2.33
Trav4n-4A0A075B615 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC0.48□□□□□ -2.33
Trav4n-4A0A075B615 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC0.48□□□□□ -2.33
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms