Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Col13a1Q9R1N9 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Col13a1Q9R1N9 Gm42486-201ENSMUST00000200369 3486 ntBASIC3.3□□□□□ -1.88
Col13a1Q9R1N9 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Col13a1Q9R1N9 Gm22023-201ENSMUST00000104354 130 ntBASIC3.3□□□□□ -1.88
Col13a1Q9R1N9 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Col13a1Q9R1N9 Gm23226-201ENSMUST00000116927 103 ntBASIC3.3□□□□□ -1.88
Col13a1Q9R1N9 Gm13155-201ENSMUST00000119277 646 ntBASIC3.3□□□□□ -1.88
Col13a1Q9R1N9 Defa-ps8-201ENSMUST00000120972 279 ntBASIC3.3□□□□□ -1.88
Col13a1Q9R1N9 Gm8178-201ENSMUST00000121570 646 ntBASIC3.3□□□□□ -1.88
Col13a1Q9R1N9 Gm15986-201ENSMUST00000122153 400 ntBASIC3.3□□□□□ -1.88
Col13a1Q9R1N9 Gm11819-201ENSMUST00000122192 372 ntBASIC3.3□□□□□ -1.88
Col13a1Q9R1N9 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC3.3□□□□□ -1.88
Col13a1Q9R1N9 Gm26275-201ENSMUST00000157101 268 ntBASIC3.3□□□□□ -1.88
Col13a1Q9R1N9 Gm23540-201ENSMUST00000157543 164 ntBASIC3.3□□□□□ -1.88
Col13a1Q9R1N9 Gm5967-201ENSMUST00000172723 494 ntBASIC3.3□□□□□ -1.88
Col13a1Q9R1N9 Gm20450-201ENSMUST00000173652 147 ntBASIC3.3□□□□□ -1.88
Col13a1Q9R1N9 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC3.3□□□□□ -1.88
Col13a1Q9R1N9 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC3.3□□□□□ -1.88
Col13a1Q9R1N9 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Col13a1Q9R1N9 AC159885.1-201ENSMUST00000222221 199 ntBASIC3.3□□□□□ -1.88
Col13a1Q9R1N9 Gm9818-201ENSMUST00000050900 255 ntBASIC3.3□□□□□ -1.88
Col13a1Q9R1N9 Snora70-201ENSMUST00000083047 137 ntBASIC3.3□□□□□ -1.88
Col13a1Q9R1N9 Gm25581-201ENSMUST00000083410 164 ntBASIC3.3□□□□□ -1.88
Col13a1Q9R1N9 Gm26166-201ENSMUST00000083788 107 ntBASIC3.3□□□□□ -1.88
Col13a1Q9R1N9 Gm10212-201ENSMUST00000087884 324 ntBASIC3.3□□□□□ -1.88
Col13a1Q9R1N9 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Col13a1Q9R1N9 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Col13a1Q9R1N9 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Col13a1Q9R1N9 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Col13a1Q9R1N9 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
Col13a1Q9R1N9 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Col13a1Q9R1N9 Gm42481-201ENSMUST00000196822 2178 ntBASIC3.29□□□□□ -1.88
Col13a1Q9R1N9 Gm37236-201ENSMUST00000193670 3249 ntBASIC3.29□□□□□ -1.88
Col13a1Q9R1N9 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
Col13a1Q9R1N9 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Col13a1Q9R1N9 Gm37941-201ENSMUST00000192170 2309 ntBASIC3.29□□□□□ -1.88
Col13a1Q9R1N9 Gm23747-201ENSMUST00000104228 131 ntBASIC3.29□□□□□ -1.88
Col13a1Q9R1N9 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC3.29□□□□□ -1.88
Col13a1Q9R1N9 Gm7618-201ENSMUST00000121643 171 ntBASIC3.29□□□□□ -1.88
Col13a1Q9R1N9 Mir1942-201ENSMUST00000157274 63 ntBASIC3.29□□□□□ -1.88
Col13a1Q9R1N9 Gm22156-201ENSMUST00000158409 141 ntBASIC3.29□□□□□ -1.88
Col13a1Q9R1N9 Gm37763-201ENSMUST00000193445 120 ntBASIC3.29□□□□□ -1.88
Col13a1Q9R1N9 Gm17887-201ENSMUST00000200194 547 ntBASIC3.29□□□□□ -1.88
Col13a1Q9R1N9 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC3.29□□□□□ -1.88
Col13a1Q9R1N9 Gm18921-201ENSMUST00000221798 366 ntBASIC3.29□□□□□ -1.88
Col13a1Q9R1N9 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
Col13a1Q9R1N9 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC3.29□□□□□ -1.88
Col13a1Q9R1N9 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC3.29□□□□□ -1.88
Col13a1Q9R1N9 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Col13a1Q9R1N9 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Col13a1Q9R1N9 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Col13a1Q9R1N9 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Col13a1Q9R1N9 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Col13a1Q9R1N9 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Col13a1Q9R1N9 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
Col13a1Q9R1N9 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
Col13a1Q9R1N9 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Col13a1Q9R1N9 Mir465b-1-201ENSMUST00000103940 79 ntBASIC3.28□□□□□ -1.88
Col13a1Q9R1N9 Gm23705-201ENSMUST00000104370 130 ntBASIC3.28□□□□□ -1.88
Col13a1Q9R1N9 Gm24067-201ENSMUST00000104514 85 ntBASIC3.28□□□□□ -1.88
Col13a1Q9R1N9 Mir465b-2-201ENSMUST00000104662 79 ntBASIC3.28□□□□□ -1.88
Col13a1Q9R1N9 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC3.28□□□□□ -1.88
Col13a1Q9R1N9 Gm13581-201ENSMUST00000120675 278 ntBASIC3.28□□□□□ -1.88
Col13a1Q9R1N9 Gm11645-201ENSMUST00000121589 649 ntBASIC3.28□□□□□ -1.88
Col13a1Q9R1N9 Gm26479-201ENSMUST00000122620 106 ntBASIC3.28□□□□□ -1.88
Col13a1Q9R1N9 Gm24138-201ENSMUST00000157572 114 ntBASIC3.28□□□□□ -1.88
Col13a1Q9R1N9 Gm26186-201ENSMUST00000157689 125 ntBASIC3.28□□□□□ -1.88
Col13a1Q9R1N9 Gm22447-201ENSMUST00000158155 92 ntBASIC3.28□□□□□ -1.88
Col13a1Q9R1N9 Gm24666-201ENSMUST00000158937 167 ntBASIC3.28□□□□□ -1.88
Col13a1Q9R1N9 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC3.28□□□□□ -1.88
Col13a1Q9R1N9 Gm24086-201ENSMUST00000175171 98 ntBASIC3.28□□□□□ -1.88
Col13a1Q9R1N9 Mir7k-201ENSMUST00000184115 110 ntBASIC3.28□□□□□ -1.88
Col13a1Q9R1N9 Ighv12-2-201ENSMUST00000191949 362 ntBASIC3.28□□□□□ -1.88
Col13a1Q9R1N9 Gm37361-201ENSMUST00000194345 132 ntBASIC3.28□□□□□ -1.88
Col13a1Q9R1N9 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
Col13a1Q9R1N9 Gm37417-201ENSMUST00000195257 454 ntBASIC3.28□□□□□ -1.88
Col13a1Q9R1N9 Gm37290-201ENSMUST00000195775 339 ntBASIC3.28□□□□□ -1.88
Col13a1Q9R1N9 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC3.28□□□□□ -1.88
Col13a1Q9R1N9 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC3.28□□□□□ -1.88
Col13a1Q9R1N9 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Col13a1Q9R1N9 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC3.28□□□□□ -1.88
Col13a1Q9R1N9 Gm9712-201ENSMUST00000210842 311 ntBASIC3.28□□□□□ -1.88
Col13a1Q9R1N9 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.28□□□□□ -1.88
Col13a1Q9R1N9 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Col13a1Q9R1N9 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Col13a1Q9R1N9 Gm23517-201ENSMUST00000082830 192 ntBASIC3.28□□□□□ -1.88
Col13a1Q9R1N9 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
Col13a1Q9R1N9 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
Col13a1Q9R1N9 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Col13a1Q9R1N9 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
Col13a1Q9R1N9 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Col13a1Q9R1N9 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.27□□□□□ -1.89
Col13a1Q9R1N9 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Col13a1Q9R1N9 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC3.27□□□□□ -1.89
Col13a1Q9R1N9 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
Col13a1Q9R1N9 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC3.27□□□□□ -1.89
Col13a1Q9R1N9 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC3.27□□□□□ -1.89
Col13a1Q9R1N9 Gm25407-201ENSMUST00000104102 134 ntBASIC3.27□□□□□ -1.89
Col13a1Q9R1N9 Gm11065-201ENSMUST00000111462 228 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 116.6 ms