Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC2.17□□□□□ -2.06
Scn5aQ9JJV9 Gm24313-201ENSMUST00000082561 133 ntBASIC2.17□□□□□ -2.06
Scn5aQ9JJV9 Gm22229-201ENSMUST00000082987 108 ntBASIC2.17□□□□□ -2.06
Scn5aQ9JJV9 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.17□□□□□ -2.06
Scn5aQ9JJV9 Gm6444-201ENSMUST00000119611 458 ntBASIC2.17□□□□□ -2.06
Scn5aQ9JJV9 Gm14402-201ENSMUST00000122217 508 ntBASIC2.17□□□□□ -2.06
Scn5aQ9JJV9 Gm25945-201ENSMUST00000122484 135 ntBASIC2.17□□□□□ -2.06
Scn5aQ9JJV9 Gm23124-201ENSMUST00000157650 107 ntBASIC2.17□□□□□ -2.06
Scn5aQ9JJV9 Gm24237-201ENSMUST00000157790 132 ntBASIC2.17□□□□□ -2.06
Scn5aQ9JJV9 Gm23068-201ENSMUST00000158239 293 ntBASIC2.17□□□□□ -2.06
Scn5aQ9JJV9 Gm26024-201ENSMUST00000158657 322 ntBASIC2.17□□□□□ -2.06
Scn5aQ9JJV9 Gm21758-201ENSMUST00000179336 819 ntBASIC2.17□□□□□ -2.06
Scn5aQ9JJV9 Gm24464-201ENSMUST00000179697 107 ntBASIC2.17□□□□□ -2.06
Scn5aQ9JJV9 Mir8106-201ENSMUST00000184520 139 ntBASIC2.17□□□□□ -2.06
Scn5aQ9JJV9 Gm29647-201ENSMUST00000188795 666 ntBASIC2.17□□□□□ -2.06
Scn5aQ9JJV9 Gm20832-201ENSMUST00000189076 665 ntBASIC2.17□□□□□ -2.06
Scn5aQ9JJV9 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Scn5aQ9JJV9 Gm28241-201ENSMUST00000190916 235 ntBASIC2.17□□□□□ -2.06
Scn5aQ9JJV9 Gm28504-201ENSMUST00000190977 666 ntBASIC2.17□□□□□ -2.06
Scn5aQ9JJV9 Gm31511-201ENSMUST00000193134 657 ntBASIC2.17□□□□□ -2.06
Scn5aQ9JJV9 Gm35843-201ENSMUST00000193716 666 ntBASIC2.17□□□□□ -2.06
Scn5aQ9JJV9 Gm36728-201ENSMUST00000195782 665 ntBASIC2.17□□□□□ -2.06
Scn5aQ9JJV9 Gm18703-201ENSMUST00000215318 333 ntBASIC2.17□□□□□ -2.06
Scn5aQ9JJV9 AC154271.1-201ENSMUST00000224780 383 ntBASIC2.17□□□□□ -2.06
Scn5aQ9JJV9 CT025689.4-201ENSMUST00000225926 601 ntBASIC2.17□□□□□ -2.06
Scn5aQ9JJV9 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.17□□□□□ -2.06
Scn5aQ9JJV9 Gm25698-201ENSMUST00000082897 107 ntBASIC2.17□□□□□ -2.06
Scn5aQ9JJV9 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
Scn5aQ9JJV9 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
Scn5aQ9JJV9 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Scn5aQ9JJV9 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Scn5aQ9JJV9 Gm25938-201ENSMUST00000104139 166 ntBASIC2.16□□□□□ -2.06
Scn5aQ9JJV9 Gm12806-201ENSMUST00000119384 268 ntBASIC2.16□□□□□ -2.06
Scn5aQ9JJV9 Gm7916-201ENSMUST00000120325 456 ntBASIC2.16□□□□□ -2.06
Scn5aQ9JJV9 Gm13368-201ENSMUST00000122443 430 ntBASIC2.16□□□□□ -2.06
Scn5aQ9JJV9 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC2.16□□□□□ -2.06
Scn5aQ9JJV9 Gm29107-201ENSMUST00000190910 347 ntBASIC2.16□□□□□ -2.06
Scn5aQ9JJV9 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC2.16□□□□□ -2.06
Scn5aQ9JJV9 Gm43513-201ENSMUST00000199779 1076 ntBASIC2.16□□□□□ -2.06
Scn5aQ9JJV9 Gm45445-201ENSMUST00000209586 232 ntBASIC2.16□□□□□ -2.06
Scn5aQ9JJV9 AC147633.1-201ENSMUST00000225134 259 ntBASIC2.16□□□□□ -2.06
Scn5aQ9JJV9 AC129085.5-201ENSMUST00000225468 400 ntBASIC2.16□□□□□ -2.06
Scn5aQ9JJV9 Gm24948-201ENSMUST00000082866 207 ntBASIC2.16□□□□□ -2.06
Scn5aQ9JJV9 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Scn5aQ9JJV9 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Scn5aQ9JJV9 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Scn5aQ9JJV9 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
Scn5aQ9JJV9 Gm22779-201ENSMUST00000104085 107 ntBASIC2.15□□□□□ -2.06
Scn5aQ9JJV9 Gm22496-201ENSMUST00000104493 88 ntBASIC2.15□□□□□ -2.06
Scn5aQ9JJV9 Mir466f-2-201ENSMUST00000104805 94 ntBASIC2.15□□□□□ -2.06
Scn5aQ9JJV9 Gm22713-201ENSMUST00000116895 130 ntBASIC2.15□□□□□ -2.06
Scn5aQ9JJV9 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC2.15□□□□□ -2.06
Scn5aQ9JJV9 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC2.15□□□□□ -2.06
Scn5aQ9JJV9 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC2.15□□□□□ -2.06
Scn5aQ9JJV9 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC2.15□□□□□ -2.06
Scn5aQ9JJV9 Gm26345-201ENSMUST00000157534 120 ntBASIC2.15□□□□□ -2.06
Scn5aQ9JJV9 Gm8207-201ENSMUST00000171204 502 ntBASIC2.15□□□□□ -2.06
Scn5aQ9JJV9 Gm25175-201ENSMUST00000178712 79 ntBASIC2.15□□□□□ -2.06
Scn5aQ9JJV9 Gm27490-201ENSMUST00000184754 128 ntBASIC2.15□□□□□ -2.06
Scn5aQ9JJV9 Gm29658-201ENSMUST00000185404 230 ntBASIC2.15□□□□□ -2.06
Scn5aQ9JJV9 Gm29216-201ENSMUST00000187117 492 ntBASIC2.15□□□□□ -2.06
Scn5aQ9JJV9 Gm28744-201ENSMUST00000189939 340 ntBASIC2.15□□□□□ -2.06
Scn5aQ9JJV9 Gm7871-201ENSMUST00000195346 618 ntBASIC2.15□□□□□ -2.06
Scn5aQ9JJV9 Gm43652-201ENSMUST00000196219 675 ntBASIC2.15□□□□□ -2.06
Scn5aQ9JJV9 Gm19089-201ENSMUST00000197207 613 ntBASIC2.15□□□□□ -2.06
Scn5aQ9JJV9 Gm44011-201ENSMUST00000203336 394 ntBASIC2.15□□□□□ -2.06
Scn5aQ9JJV9 AL450317.1-201ENSMUST00000213941 291 ntBASIC2.15□□□□□ -2.06
Scn5aQ9JJV9 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC2.15□□□□□ -2.06
Scn5aQ9JJV9 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC2.15□□□□□ -2.06
Scn5aQ9JJV9 Gm23727-201ENSMUST00000083352 164 ntBASIC2.15□□□□□ -2.06
Scn5aQ9JJV9 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.06
Scn5aQ9JJV9 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
Scn5aQ9JJV9 Gm10400-201ENSMUST00000203920 3835 ntBASIC2.15□□□□□ -2.07
Scn5aQ9JJV9 Gm37479-201ENSMUST00000194169 3841 ntBASIC2.15□□□□□ -2.07
Scn5aQ9JJV9 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Scn5aQ9JJV9 Gm13343-201ENSMUST00000116474 105 ntBASIC2.15□□□□□ -2.07
Scn5aQ9JJV9 Gm14594-201ENSMUST00000118052 537 ntBASIC2.15□□□□□ -2.07
Scn5aQ9JJV9 Gm14590-201ENSMUST00000118934 537 ntBASIC2.15□□□□□ -2.07
Scn5aQ9JJV9 Gm5396-201ENSMUST00000121222 532 ntBASIC2.15□□□□□ -2.07
Scn5aQ9JJV9 Gm23429-201ENSMUST00000122486 149 ntBASIC2.15□□□□□ -2.07
Scn5aQ9JJV9 Gm23078-201ENSMUST00000157848 148 ntBASIC2.15□□□□□ -2.07
Scn5aQ9JJV9 Gm24439-201ENSMUST00000157894 117 ntBASIC2.15□□□□□ -2.07
Scn5aQ9JJV9 Mir9-3-201ENSMUST00000175497 90 ntBASIC2.15□□□□□ -2.07
Scn5aQ9JJV9 Gm22851-201ENSMUST00000178741 94 ntBASIC2.15□□□□□ -2.07
Scn5aQ9JJV9 Gm25074-201ENSMUST00000178782 94 ntBASIC2.15□□□□□ -2.07
Scn5aQ9JJV9 Gm14596-201ENSMUST00000180268 537 ntBASIC2.15□□□□□ -2.07
Scn5aQ9JJV9 Gm14595-201ENSMUST00000180335 537 ntBASIC2.15□□□□□ -2.07
Scn5aQ9JJV9 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC2.15□□□□□ -2.07
Scn5aQ9JJV9 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC2.15□□□□□ -2.07
Scn5aQ9JJV9 Gm37162-201ENSMUST00000191708 551 ntBASIC2.15□□□□□ -2.07
Scn5aQ9JJV9 Gm37455-201ENSMUST00000191993 529 ntBASIC2.15□□□□□ -2.07
Scn5aQ9JJV9 Gm42475-201ENSMUST00000201212 295 ntBASIC2.15□□□□□ -2.07
Scn5aQ9JJV9 Gm19140-201ENSMUST00000209790 421 ntBASIC2.15□□□□□ -2.07
Scn5aQ9JJV9 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Scn5aQ9JJV9 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Scn5aQ9JJV9 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Scn5aQ9JJV9 Gm25421-201ENSMUST00000104218 164 ntBASIC2.14□□□□□ -2.07
Scn5aQ9JJV9 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Scn5aQ9JJV9 Gm15846-201ENSMUST00000116022 320 ntBASIC2.14□□□□□ -2.07
Scn5aQ9JJV9 Gm15714-201ENSMUST00000117168 250 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms