Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Snora33-201ENSMUST00000093556 129 ntBASIC1.62□□□□□ -2.15
Lima1Q9ERG0 Gm23516-201ENSMUST00000093728 107 ntBASIC1.62□□□□□ -2.15
Lima1Q9ERG0 Gm23741-201ENSMUST00000097237 171 ntBASIC1.62□□□□□ -2.15
Lima1Q9ERG0 Gm14445-201ENSMUST00000117051 1484 ntBASIC1.62□□□□□ -2.15
Lima1Q9ERG0 Gm11845-201ENSMUST00000117886 327 ntBASIC1.61□□□□□ -2.15
Lima1Q9ERG0 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC1.61□□□□□ -2.15
Lima1Q9ERG0 Gm25711-201ENSMUST00000158633 128 ntBASIC1.61□□□□□ -2.15
Lima1Q9ERG0 Gm16584-201ENSMUST00000159267 189 ntBASIC1.61□□□□□ -2.15
Lima1Q9ERG0 Gm17377-201ENSMUST00000165184 207 ntBASIC1.61□□□□□ -2.15
Lima1Q9ERG0 Gm25156-201ENSMUST00000179809 79 ntBASIC1.61□□□□□ -2.15
Lima1Q9ERG0 Mir6370-201ENSMUST00000183510 120 ntBASIC1.61□□□□□ -2.15
Lima1Q9ERG0 Gm37102-201ENSMUST00000195740 1105 ntBASIC1.61□□□□□ -2.15
Lima1Q9ERG0 Gm42647-201ENSMUST00000195939 459 ntBASIC1.61□□□□□ -2.15
Lima1Q9ERG0 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC1.61□□□□□ -2.15
Lima1Q9ERG0 Gm26126-201ENSMUST00000083188 164 ntBASIC1.61□□□□□ -2.15
Lima1Q9ERG0 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC1.61□□□□□ -2.15
Lima1Q9ERG0 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
Lima1Q9ERG0 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
Lima1Q9ERG0 Gm3563-201ENSMUST00000172963 1628 ntBASIC1.6□□□□□ -2.15
Lima1Q9ERG0 Gm23950-201ENSMUST00000104026 129 ntBASIC1.6□□□□□ -2.15
Lima1Q9ERG0 AA413626-201ENSMUST00000121125 494 ntBASIC1.6□□□□□ -2.15
Lima1Q9ERG0 Gm23332-201ENSMUST00000157424 275 ntBASIC1.6□□□□□ -2.15
Lima1Q9ERG0 Gm24601-201ENSMUST00000157970 143 ntBASIC1.6□□□□□ -2.15
Lima1Q9ERG0 Gm24174-201ENSMUST00000158933 111 ntBASIC1.6□□□□□ -2.15
Lima1Q9ERG0 Gm17085-201ENSMUST00000165425 502 ntBASIC1.6□□□□□ -2.15
Lima1Q9ERG0 Gm25994-201ENSMUST00000175392 101 ntBASIC1.6□□□□□ -2.15
Lima1Q9ERG0 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC1.6□□□□□ -2.15
Lima1Q9ERG0 Gm44395-201ENSMUST00000197056 153 ntBASIC1.6□□□□□ -2.15
Lima1Q9ERG0 Igkv13-76-201ENSMUST00000197621 347 ntBASIC1.6□□□□□ -2.15
Lima1Q9ERG0 Gm44254-201ENSMUST00000204184 322 ntBASIC1.6□□□□□ -2.15
Lima1Q9ERG0 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC1.6□□□□□ -2.15
Lima1Q9ERG0 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC1.6□□□□□ -2.15
Lima1Q9ERG0 AC154424.1-201ENSMUST00000225883 799 ntBASIC1.6□□□□□ -2.15
Lima1Q9ERG0 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Lima1Q9ERG0 Gm23246-201ENSMUST00000083371 67 ntBASIC1.6□□□□□ -2.15
Lima1Q9ERG0 Mir151-201ENSMUST00000083678 68 ntBASIC1.6□□□□□ -2.15
Lima1Q9ERG0 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Lima1Q9ERG0 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
Lima1Q9ERG0 Gm11854-201ENSMUST00000117839 446 ntBASIC1.59□□□□□ -2.15
Lima1Q9ERG0 Gm14428-201ENSMUST00000120408 822 ntBASIC1.59□□□□□ -2.15
Lima1Q9ERG0 Gm13903-201ENSMUST00000120945 193 ntBASIC1.59□□□□□ -2.15
Lima1Q9ERG0 Gm23043-201ENSMUST00000157890 109 ntBASIC1.59□□□□□ -2.15
Lima1Q9ERG0 Gm24837-201ENSMUST00000158683 81 ntBASIC1.59□□□□□ -2.15
Lima1Q9ERG0 Gm25365-201ENSMUST00000158852 121 ntBASIC1.59□□□□□ -2.15
Lima1Q9ERG0 Gm26157-201ENSMUST00000158974 126 ntBASIC1.59□□□□□ -2.15
Lima1Q9ERG0 Gm7592-201ENSMUST00000160674 627 ntBASIC1.59□□□□□ -2.15
Lima1Q9ERG0 Gm3221-201ENSMUST00000164869 440 ntBASIC1.59□□□□□ -2.15
Lima1Q9ERG0 Gm17054-201ENSMUST00000169811 259 ntBASIC1.59□□□□□ -2.15
Lima1Q9ERG0 Gm6660-201ENSMUST00000179149 468 ntBASIC1.59□□□□□ -2.15
Lima1Q9ERG0 Gm33866-201ENSMUST00000196911 289 ntBASIC1.59□□□□□ -2.15
Lima1Q9ERG0 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC1.59□□□□□ -2.15
Lima1Q9ERG0 Gm44609-201ENSMUST00000207157 460 ntBASIC1.59□□□□□ -2.15
Lima1Q9ERG0 Gm2676-201ENSMUST00000207279 606 ntBASIC1.59□□□□□ -2.15
Lima1Q9ERG0 Gm44825-201ENSMUST00000207557 150 ntBASIC1.59□□□□□ -2.15
Lima1Q9ERG0 Gm44598-201ENSMUST00000207566 150 ntBASIC1.59□□□□□ -2.15
Lima1Q9ERG0 AC113031.5-201ENSMUST00000227116 606 ntBASIC1.59□□□□□ -2.15
Lima1Q9ERG0 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
Lima1Q9ERG0 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
Lima1Q9ERG0 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.58□□□□□ -2.16
Lima1Q9ERG0 Gm25088-201ENSMUST00000101803 79 ntBASIC1.58□□□□□ -2.16
Lima1Q9ERG0 Mdga2-203ENSMUST00000113942 423 ntBASIC1.58□□□□□ -2.16
Lima1Q9ERG0 Gm25317-201ENSMUST00000116824 129 ntBASIC1.58□□□□□ -2.16
Lima1Q9ERG0 Gm14943-201ENSMUST00000118056 546 ntBASIC1.58□□□□□ -2.16
Lima1Q9ERG0 Gm9703-201ENSMUST00000119573 343 ntBASIC1.58□□□□□ -2.16
Lima1Q9ERG0 Gm23118-201ENSMUST00000122657 187 ntBASIC1.58□□□□□ -2.16
Lima1Q9ERG0 Gm25294-201ENSMUST00000122791 104 ntBASIC1.58□□□□□ -2.16
Lima1Q9ERG0 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC1.58□□□□□ -2.16
Lima1Q9ERG0 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC1.58□□□□□ -2.16
Lima1Q9ERG0 Mir1949-201ENSMUST00000157434 141 ntBASIC1.58□□□□□ -2.16
Lima1Q9ERG0 Gm22803-201ENSMUST00000158049 283 ntBASIC1.58□□□□□ -2.16
Lima1Q9ERG0 Gm28283-201ENSMUST00000185509 178 ntBASIC1.58□□□□□ -2.16
Lima1Q9ERG0 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
Lima1Q9ERG0 Gm43512-201ENSMUST00000198495 176 ntBASIC1.58□□□□□ -2.16
Lima1Q9ERG0 Gm43578-201ENSMUST00000201250 459 ntBASIC1.58□□□□□ -2.16
Lima1Q9ERG0 Gm45150-201ENSMUST00000206051 467 ntBASIC1.58□□□□□ -2.16
Lima1Q9ERG0 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC1.58□□□□□ -2.16
Lima1Q9ERG0 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC1.58□□□□□ -2.16
Lima1Q9ERG0 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC1.58□□□□□ -2.16
Lima1Q9ERG0 AC154506.3-201ENSMUST00000225417 213 ntBASIC1.58□□□□□ -2.16
Lima1Q9ERG0 AC123656.2-201ENSMUST00000226726 227 ntBASIC1.58□□□□□ -2.16
Lima1Q9ERG0 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.58□□□□□ -2.16
Lima1Q9ERG0 AC137902.2-201ENSMUST00000227989 576 ntBASIC1.58□□□□□ -2.16
Lima1Q9ERG0 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
Lima1Q9ERG0 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Lima1Q9ERG0 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC1.58□□□□□ -2.16
Lima1Q9ERG0 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
Lima1Q9ERG0 Gm26396-201ENSMUST00000104093 132 ntBASIC1.57□□□□□ -2.16
Lima1Q9ERG0 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
Lima1Q9ERG0 Gm12393-201ENSMUST00000117084 848 ntBASIC1.57□□□□□ -2.16
Lima1Q9ERG0 Gm15167-201ENSMUST00000121997 187 ntBASIC1.57□□□□□ -2.16
Lima1Q9ERG0 Gm22793-201ENSMUST00000157227 330 ntBASIC1.57□□□□□ -2.16
Lima1Q9ERG0 Gm18358-201ENSMUST00000173179 1277 ntBASIC1.57□□□□□ -2.16
Lima1Q9ERG0 Mir6352-201ENSMUST00000184495 116 ntBASIC1.57□□□□□ -2.16
Lima1Q9ERG0 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
Lima1Q9ERG0 Gm38238-201ENSMUST00000194334 346 ntBASIC1.57□□□□□ -2.16
Lima1Q9ERG0 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC1.57□□□□□ -2.16
Lima1Q9ERG0 Gm42807-201ENSMUST00000200141 329 ntBASIC1.57□□□□□ -2.16
Lima1Q9ERG0 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC1.57□□□□□ -2.16
Lima1Q9ERG0 AC091260.1-201ENSMUST00000216112 229 ntBASIC1.57□□□□□ -2.16
Lima1Q9ERG0 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms