Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
Vps28Q9D1C8 Gm13728-201ENSMUST00000117471 400 ntBASIC2.78□□□□□ -1.96
Vps28Q9D1C8 Gm12934-201ENSMUST00000119221 343 ntBASIC2.78□□□□□ -1.96
Vps28Q9D1C8 Gm15030-201ENSMUST00000119804 484 ntBASIC2.78□□□□□ -1.96
Vps28Q9D1C8 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Vps28Q9D1C8 Gm24846-201ENSMUST00000158033 108 ntBASIC2.78□□□□□ -1.96
Vps28Q9D1C8 Gm22389-201ENSMUST00000158193 301 ntBASIC2.78□□□□□ -1.96
Vps28Q9D1C8 Gm24211-201ENSMUST00000158264 107 ntBASIC2.78□□□□□ -1.96
Vps28Q9D1C8 Gm25162-201ENSMUST00000158906 159 ntBASIC2.78□□□□□ -1.96
Vps28Q9D1C8 Gm27379-201ENSMUST00000183730 123 ntBASIC2.78□□□□□ -1.96
Vps28Q9D1C8 Gm27761-201ENSMUST00000184091 131 ntBASIC2.78□□□□□ -1.96
Vps28Q9D1C8 Gm27786-201ENSMUST00000184337 70 ntBASIC2.78□□□□□ -1.96
Vps28Q9D1C8 Gm27624-201ENSMUST00000185047 177 ntBASIC2.78□□□□□ -1.96
Vps28Q9D1C8 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC2.78□□□□□ -1.96
Vps28Q9D1C8 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC2.78□□□□□ -1.96
Vps28Q9D1C8 Gm9402-201ENSMUST00000196849 388 ntBASIC2.78□□□□□ -1.96
Vps28Q9D1C8 Gm42622-201ENSMUST00000197229 355 ntBASIC2.78□□□□□ -1.96
Vps28Q9D1C8 Gm43708-201ENSMUST00000198857 961 ntBASIC2.78□□□□□ -1.96
Vps28Q9D1C8 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC2.78□□□□□ -1.96
Vps28Q9D1C8 Gm44526-201ENSMUST00000204664 121 ntBASIC2.78□□□□□ -1.96
Vps28Q9D1C8 Gm9377-201ENSMUST00000207227 623 ntBASIC2.78□□□□□ -1.96
Vps28Q9D1C8 Gm5374-201ENSMUST00000222868 657 ntBASIC2.78□□□□□ -1.96
Vps28Q9D1C8 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Vps28Q9D1C8 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Vps28Q9D1C8 Gm25475-201ENSMUST00000082825 180 ntBASIC2.78□□□□□ -1.96
Vps28Q9D1C8 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Vps28Q9D1C8 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
Vps28Q9D1C8 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Vps28Q9D1C8 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Vps28Q9D1C8 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC2.77□□□□□ -1.97
Vps28Q9D1C8 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Vps28Q9D1C8 AC153967.1-201ENSMUST00000219333 3190 ntBASIC2.77□□□□□ -1.97
Vps28Q9D1C8 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.77□□□□□ -1.97
Vps28Q9D1C8 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Vps28Q9D1C8 Gm12255-201ENSMUST00000117184 284 ntBASIC2.77□□□□□ -1.97
Vps28Q9D1C8 Gm13903-201ENSMUST00000120945 193 ntBASIC2.77□□□□□ -1.97
Vps28Q9D1C8 Gm13409-201ENSMUST00000122072 546 ntBASIC2.77□□□□□ -1.97
Vps28Q9D1C8 Gm15986-201ENSMUST00000122153 400 ntBASIC2.77□□□□□ -1.97
Vps28Q9D1C8 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Vps28Q9D1C8 Mir5099-201ENSMUST00000175257 74 ntBASIC2.77□□□□□ -1.97
Vps28Q9D1C8 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC2.77□□□□□ -1.97
Vps28Q9D1C8 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC2.77□□□□□ -1.97
Vps28Q9D1C8 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Vps28Q9D1C8 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC2.77□□□□□ -1.97
Vps28Q9D1C8 AC164297.5-201ENSMUST00000224365 198 ntBASIC2.77□□□□□ -1.97
Vps28Q9D1C8 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Vps28Q9D1C8 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Vps28Q9D1C8 Gm45104-201ENSMUST00000208748 4350 ntBASIC2.76□□□□□ -1.97
Vps28Q9D1C8 Gm24582-201ENSMUST00000103967 103 ntBASIC2.76□□□□□ -1.97
Vps28Q9D1C8 Mir743b-201ENSMUST00000104751 77 ntBASIC2.76□□□□□ -1.97
Vps28Q9D1C8 Gm11359-201ENSMUST00000120039 567 ntBASIC2.76□□□□□ -1.97
Vps28Q9D1C8 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Vps28Q9D1C8 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Vps28Q9D1C8 Gm25314-201ENSMUST00000178810 79 ntBASIC2.76□□□□□ -1.97
Vps28Q9D1C8 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Vps28Q9D1C8 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC2.76□□□□□ -1.97
Vps28Q9D1C8 Gm27532-201ENSMUST00000183726 113 ntBASIC2.76□□□□□ -1.97
Vps28Q9D1C8 Gm44465-201ENSMUST00000199536 114 ntBASIC2.76□□□□□ -1.97
Vps28Q9D1C8 Gm44903-201ENSMUST00000206840 130 ntBASIC2.76□□□□□ -1.97
Vps28Q9D1C8 Gm45402-201ENSMUST00000211796 223 ntBASIC2.76□□□□□ -1.97
Vps28Q9D1C8 Gm46312-201ENSMUST00000220961 420 ntBASIC2.76□□□□□ -1.97
Vps28Q9D1C8 AC154576.2-202ENSMUST00000223916 688 ntBASIC2.76□□□□□ -1.97
Vps28Q9D1C8 AC154271.1-201ENSMUST00000224780 383 ntBASIC2.76□□□□□ -1.97
Vps28Q9D1C8 AC122393.3-201ENSMUST00000226343 1059 ntBASIC2.76□□□□□ -1.97
Vps28Q9D1C8 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Vps28Q9D1C8 Gm23614-201ENSMUST00000082598 107 ntBASIC2.76□□□□□ -1.97
Vps28Q9D1C8 Gm22620-201ENSMUST00000082700 133 ntBASIC2.76□□□□□ -1.97
Vps28Q9D1C8 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Vps28Q9D1C8 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Vps28Q9D1C8 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Vps28Q9D1C8 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Vps28Q9D1C8 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC2.75□□□□□ -1.97
Vps28Q9D1C8 Gm12871-201ENSMUST00000118758 438 ntBASIC2.75□□□□□ -1.97
Vps28Q9D1C8 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC2.75□□□□□ -1.97
Vps28Q9D1C8 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.75□□□□□ -1.97
Vps28Q9D1C8 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC2.75□□□□□ -1.97
Vps28Q9D1C8 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC2.75□□□□□ -1.97
Vps28Q9D1C8 Gm44446-201ENSMUST00000204864 255 ntBASIC2.75□□□□□ -1.97
Vps28Q9D1C8 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC2.75□□□□□ -1.97
Vps28Q9D1C8 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC2.75□□□□□ -1.97
Vps28Q9D1C8 Gm45452-201ENSMUST00000210905 177 ntBASIC2.75□□□□□ -1.97
Vps28Q9D1C8 Gm2436-201ENSMUST00000219562 774 ntBASIC2.75□□□□□ -1.97
Vps28Q9D1C8 Gm22806-201ENSMUST00000082738 136 ntBASIC2.75□□□□□ -1.97
Vps28Q9D1C8 Gm26458-201ENSMUST00000082832 128 ntBASIC2.75□□□□□ -1.97
Vps28Q9D1C8 Gm22353-201ENSMUST00000083918 136 ntBASIC2.75□□□□□ -1.97
Vps28Q9D1C8 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.75□□□□□ -1.97
Vps28Q9D1C8 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Vps28Q9D1C8 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Vps28Q9D1C8 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Vps28Q9D1C8 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Vps28Q9D1C8 Mir542-201ENSMUST00000102186 85 ntBASIC2.74□□□□□ -1.97
Vps28Q9D1C8 Gm25270-201ENSMUST00000122606 138 ntBASIC2.74□□□□□ -1.97
Vps28Q9D1C8 Gm24291-201ENSMUST00000157633 162 ntBASIC2.74□□□□□ -1.97
Vps28Q9D1C8 Gm24681-201ENSMUST00000158760 107 ntBASIC2.74□□□□□ -1.97
Vps28Q9D1C8 Gm22858-201ENSMUST00000174972 76 ntBASIC2.74□□□□□ -1.97
Vps28Q9D1C8 Snord53-201ENSMUST00000175146 78 ntBASIC2.74□□□□□ -1.97
Vps28Q9D1C8 Mir7081-201ENSMUST00000184490 75 ntBASIC2.74□□□□□ -1.97
Vps28Q9D1C8 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Vps28Q9D1C8 Gm44726-201ENSMUST00000203427 217 ntBASIC2.74□□□□□ -1.97
Vps28Q9D1C8 AC153864.2-201ENSMUST00000220424 292 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 117 ms