Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Cldnd1Q9CQX5 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Cldnd1Q9CQX5 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC3.47□□□□□ -1.85
Cldnd1Q9CQX5 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Cldnd1Q9CQX5 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC3.47□□□□□ -1.85
Cldnd1Q9CQX5 Gm37320-201ENSMUST00000192781 4953 ntBASIC3.46□□□□□ -1.85
Cldnd1Q9CQX5 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Cldnd1Q9CQX5 Gm42993-201ENSMUST00000196856 7325 ntBASIC3.46□□□□□ -1.86
Cldnd1Q9CQX5 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Cldnd1Q9CQX5 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Cldnd1Q9CQX5 Mir1198-201ENSMUST00000116995 121 ntBASIC3.46□□□□□ -1.86
Cldnd1Q9CQX5 Gm13880-201ENSMUST00000118421 474 ntBASIC3.46□□□□□ -1.86
Cldnd1Q9CQX5 Gm24885-201ENSMUST00000158783 270 ntBASIC3.46□□□□□ -1.86
Cldnd1Q9CQX5 Mir3103-201ENSMUST00000175474 67 ntBASIC3.46□□□□□ -1.86
Cldnd1Q9CQX5 Gm22621-201ENSMUST00000179678 74 ntBASIC3.46□□□□□ -1.86
Cldnd1Q9CQX5 Gm26585-201ENSMUST00000180890 630 ntBASIC3.46□□□□□ -1.86
Cldnd1Q9CQX5 Gm27521-201ENSMUST00000184022 64 ntBASIC3.46□□□□□ -1.86
Cldnd1Q9CQX5 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC3.46□□□□□ -1.86
Cldnd1Q9CQX5 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC3.46□□□□□ -1.86
Cldnd1Q9CQX5 Gm44399-201ENSMUST00000205043 226 ntBASIC3.46□□□□□ -1.86
Cldnd1Q9CQX5 Gm45678-201ENSMUST00000210509 295 ntBASIC3.46□□□□□ -1.86
Cldnd1Q9CQX5 AC126267.1-201ENSMUST00000214282 284 ntBASIC3.46□□□□□ -1.86
Cldnd1Q9CQX5 AC158622.1-201ENSMUST00000217107 230 ntBASIC3.46□□□□□ -1.86
Cldnd1Q9CQX5 CT485612.4-201ENSMUST00000223405 250 ntBASIC3.46□□□□□ -1.86
Cldnd1Q9CQX5 AC115291.1-201ENSMUST00000226803 258 ntBASIC3.46□□□□□ -1.86
Cldnd1Q9CQX5 Rny1-201ENSMUST00000083767 112 ntBASIC3.46□□□□□ -1.86
Cldnd1Q9CQX5 Gm23845-201ENSMUST00000083834 152 ntBASIC3.46□□□□□ -1.86
Cldnd1Q9CQX5 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
Cldnd1Q9CQX5 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Cldnd1Q9CQX5 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Cldnd1Q9CQX5 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC3.46□□□□□ -1.86
Cldnd1Q9CQX5 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Cldnd1Q9CQX5 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Cldnd1Q9CQX5 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Cldnd1Q9CQX5 Gm22939-201ENSMUST00000103958 131 ntBASIC3.45□□□□□ -1.86
Cldnd1Q9CQX5 Gm12956-201ENSMUST00000122184 414 ntBASIC3.45□□□□□ -1.86
Cldnd1Q9CQX5 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC3.45□□□□□ -1.86
Cldnd1Q9CQX5 Gm22113-201ENSMUST00000158343 104 ntBASIC3.45□□□□□ -1.86
Cldnd1Q9CQX5 Gm25643-201ENSMUST00000158874 103 ntBASIC3.45□□□□□ -1.86
Cldnd1Q9CQX5 Gm17186-201ENSMUST00000171742 456 ntBASIC3.45□□□□□ -1.86
Cldnd1Q9CQX5 Gm18520-201ENSMUST00000174783 658 ntBASIC3.45□□□□□ -1.86
Cldnd1Q9CQX5 Gm43402-201ENSMUST00000197159 159 ntBASIC3.45□□□□□ -1.86
Cldnd1Q9CQX5 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC3.45□□□□□ -1.86
Cldnd1Q9CQX5 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC3.45□□□□□ -1.86
Cldnd1Q9CQX5 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC3.45□□□□□ -1.86
Cldnd1Q9CQX5 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC3.45□□□□□ -1.86
Cldnd1Q9CQX5 Gm44966-201ENSMUST00000208096 157 ntBASIC3.45□□□□□ -1.86
Cldnd1Q9CQX5 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Cldnd1Q9CQX5 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC3.45□□□□□ -1.86
Cldnd1Q9CQX5 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Cldnd1Q9CQX5 AC155167.3-201ENSMUST00000226349 217 ntBASIC3.45□□□□□ -1.86
Cldnd1Q9CQX5 AC113031.4-201ENSMUST00000228381 514 ntBASIC3.45□□□□□ -1.86
Cldnd1Q9CQX5 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Cldnd1Q9CQX5 Gm26329-201ENSMUST00000093723 110 ntBASIC3.45□□□□□ -1.86
Cldnd1Q9CQX5 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.45□□□□□ -1.86
Cldnd1Q9CQX5 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
Cldnd1Q9CQX5 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Cldnd1Q9CQX5 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC3.45□□□□□ -1.86
Cldnd1Q9CQX5 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Cldnd1Q9CQX5 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Cldnd1Q9CQX5 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Cldnd1Q9CQX5 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC3.44□□□□□ -1.86
Cldnd1Q9CQX5 Mir875-201ENSMUST00000104698 78 ntBASIC3.44□□□□□ -1.86
Cldnd1Q9CQX5 Gm13439-201ENSMUST00000117541 409 ntBASIC3.44□□□□□ -1.86
Cldnd1Q9CQX5 Gm15936-201ENSMUST00000118706 460 ntBASIC3.44□□□□□ -1.86
Cldnd1Q9CQX5 Gm11794-201ENSMUST00000119446 237 ntBASIC3.44□□□□□ -1.86
Cldnd1Q9CQX5 Gm14551-201ENSMUST00000120802 256 ntBASIC3.44□□□□□ -1.86
Cldnd1Q9CQX5 Gm13419-201ENSMUST00000121711 271 ntBASIC3.44□□□□□ -1.86
Cldnd1Q9CQX5 Gm15213-201ENSMUST00000122098 216 ntBASIC3.44□□□□□ -1.86
Cldnd1Q9CQX5 Gm25121-201ENSMUST00000179846 79 ntBASIC3.44□□□□□ -1.86
Cldnd1Q9CQX5 Gm27997-201ENSMUST00000184942 69 ntBASIC3.44□□□□□ -1.86
Cldnd1Q9CQX5 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC3.44□□□□□ -1.86
Cldnd1Q9CQX5 Gm28650-201ENSMUST00000188413 411 ntBASIC3.44□□□□□ -1.86
Cldnd1Q9CQX5 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Cldnd1Q9CQX5 Gm28500-201ENSMUST00000190286 151 ntBASIC3.44□□□□□ -1.86
Cldnd1Q9CQX5 Gm6615-201ENSMUST00000199426 631 ntBASIC3.44□□□□□ -1.86
Cldnd1Q9CQX5 Gm45365-201ENSMUST00000209489 256 ntBASIC3.44□□□□□ -1.86
Cldnd1Q9CQX5 AC122225.1-201ENSMUST00000215641 369 ntBASIC3.44□□□□□ -1.86
Cldnd1Q9CQX5 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC3.44□□□□□ -1.86
Cldnd1Q9CQX5 LOC667541-201ENSMUST00000223408 278 ntBASIC3.44□□□□□ -1.86
Cldnd1Q9CQX5 AC129219.3-201ENSMUST00000223790 196 ntBASIC3.44□□□□□ -1.86
Cldnd1Q9CQX5 Gm9818-201ENSMUST00000050900 255 ntBASIC3.44□□□□□ -1.86
Cldnd1Q9CQX5 Gm24316-201ENSMUST00000083041 107 ntBASIC3.44□□□□□ -1.86
Cldnd1Q9CQX5 Gm23041-201ENSMUST00000083868 106 ntBASIC3.44□□□□□ -1.86
Cldnd1Q9CQX5 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.44□□□□□ -1.86
Cldnd1Q9CQX5 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Cldnd1Q9CQX5 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Cldnd1Q9CQX5 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
Cldnd1Q9CQX5 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.43□□□□□ -1.86
Cldnd1Q9CQX5 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Cldnd1Q9CQX5 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Cldnd1Q9CQX5 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC3.43□□□□□ -1.86
Cldnd1Q9CQX5 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC3.43□□□□□ -1.86
Cldnd1Q9CQX5 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Cldnd1Q9CQX5 Gm14518-201ENSMUST00000117351 542 ntBASIC3.43□□□□□ -1.86
Cldnd1Q9CQX5 Gm13167-201ENSMUST00000118554 578 ntBASIC3.43□□□□□ -1.86
Cldnd1Q9CQX5 Gm13692-201ENSMUST00000120774 371 ntBASIC3.43□□□□□ -1.86
Cldnd1Q9CQX5 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
Cldnd1Q9CQX5 Gm16327-201ENSMUST00000137146 228 ntBASIC3.43□□□□□ -1.86
Cldnd1Q9CQX5 Gm26275-201ENSMUST00000157101 268 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms