Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm38088-201ENSMUST00000195829 241 ntBASIC3.74□□□□□ -1.81
Nkx6-1Q99MA9 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC3.74□□□□□ -1.81
Nkx6-1Q99MA9 Gm45002-201ENSMUST00000208045 120 ntBASIC3.74□□□□□ -1.81
Nkx6-1Q99MA9 Gm6842-201ENSMUST00000211361 390 ntBASIC3.74□□□□□ -1.81
Nkx6-1Q99MA9 AC166343.1-201ENSMUST00000213261 577 ntBASIC3.74□□□□□ -1.81
Nkx6-1Q99MA9 AC160863.1-201ENSMUST00000218412 317 ntBASIC3.74□□□□□ -1.81
Nkx6-1Q99MA9 AC125379.1-201ENSMUST00000221928 111 ntBASIC3.74□□□□□ -1.81
Nkx6-1Q99MA9 AC100209.2-201ENSMUST00000224461 451 ntBASIC3.74□□□□□ -1.81
Nkx6-1Q99MA9 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Nkx6-1Q99MA9 Gm37777-201ENSMUST00000195546 3366 ntBASIC3.74□□□□□ -1.81
Nkx6-1Q99MA9 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Nkx6-1Q99MA9 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Nkx6-1Q99MA9 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Nkx6-1Q99MA9 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Nkx6-1Q99MA9 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC3.73□□□□□ -1.81
Nkx6-1Q99MA9 Gm25376-201ENSMUST00000104340 133 ntBASIC3.73□□□□□ -1.81
Nkx6-1Q99MA9 Mir105-201ENSMUST00000104655 80 ntBASIC3.73□□□□□ -1.81
Nkx6-1Q99MA9 Gm9157-201ENSMUST00000117673 225 ntBASIC3.73□□□□□ -1.81
Nkx6-1Q99MA9 Gm13076-201ENSMUST00000118041 204 ntBASIC3.73□□□□□ -1.81
Nkx6-1Q99MA9 Gm25783-201ENSMUST00000122525 190 ntBASIC3.73□□□□□ -1.81
Nkx6-1Q99MA9 Gm23982-201ENSMUST00000157141 106 ntBASIC3.73□□□□□ -1.81
Nkx6-1Q99MA9 Gm24008-201ENSMUST00000157733 138 ntBASIC3.73□□□□□ -1.81
Nkx6-1Q99MA9 Gm25447-201ENSMUST00000158997 128 ntBASIC3.73□□□□□ -1.81
Nkx6-1Q99MA9 Gm5258-201ENSMUST00000165437 327 ntBASIC3.73□□□□□ -1.81
Nkx6-1Q99MA9 Gm23053-201ENSMUST00000175136 96 ntBASIC3.73□□□□□ -1.81
Nkx6-1Q99MA9 Mir6938-201ENSMUST00000184173 63 ntBASIC3.73□□□□□ -1.81
Nkx6-1Q99MA9 Gm27249-201ENSMUST00000185049 328 ntBASIC3.73□□□□□ -1.81
Nkx6-1Q99MA9 Gm28848-201ENSMUST00000189984 168 ntBASIC3.73□□□□□ -1.81
Nkx6-1Q99MA9 Gm43704-201ENSMUST00000196164 496 ntBASIC3.73□□□□□ -1.81
Nkx6-1Q99MA9 Igkv1-136-201ENSMUST00000200635 297 ntBASIC3.73□□□□□ -1.81
Nkx6-1Q99MA9 Gm32381-201ENSMUST00000203192 476 ntBASIC3.73□□□□□ -1.81
Nkx6-1Q99MA9 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC3.73□□□□□ -1.81
Nkx6-1Q99MA9 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Nkx6-1Q99MA9 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Nkx6-1Q99MA9 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
Nkx6-1Q99MA9 Gm37645-201ENSMUST00000194285 3556 ntBASIC3.73□□□□□ -1.81
Nkx6-1Q99MA9 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Nkx6-1Q99MA9 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Nkx6-1Q99MA9 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Nkx6-1Q99MA9 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
Nkx6-1Q99MA9 Mir673-201ENSMUST00000102361 91 ntBASIC3.72□□□□□ -1.81
Nkx6-1Q99MA9 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Nkx6-1Q99MA9 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Nkx6-1Q99MA9 Gm22590-201ENSMUST00000104247 128 ntBASIC3.72□□□□□ -1.81
Nkx6-1Q99MA9 Gm13992-201ENSMUST00000120558 156 ntBASIC3.72□□□□□ -1.81
Nkx6-1Q99MA9 Gm12155-201ENSMUST00000121267 160 ntBASIC3.72□□□□□ -1.81
Nkx6-1Q99MA9 Gm24726-201ENSMUST00000158232 121 ntBASIC3.72□□□□□ -1.81
Nkx6-1Q99MA9 Gm24666-201ENSMUST00000158937 167 ntBASIC3.72□□□□□ -1.81
Nkx6-1Q99MA9 Gm6660-201ENSMUST00000179149 468 ntBASIC3.72□□□□□ -1.81
Nkx6-1Q99MA9 Gm27445-201ENSMUST00000184484 72 ntBASIC3.72□□□□□ -1.81
Nkx6-1Q99MA9 Gm38183-201ENSMUST00000193189 205 ntBASIC3.72□□□□□ -1.81
Nkx6-1Q99MA9 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC3.72□□□□□ -1.81
Nkx6-1Q99MA9 AC159896.1-201ENSMUST00000215264 215 ntBASIC3.72□□□□□ -1.81
Nkx6-1Q99MA9 Gm23453-201ENSMUST00000083326 106 ntBASIC3.72□□□□□ -1.81
Nkx6-1Q99MA9 Mir202-201ENSMUST00000083568 72 ntBASIC3.72□□□□□ -1.81
Nkx6-1Q99MA9 Mir471-201ENSMUST00000093596 67 ntBASIC3.72□□□□□ -1.81
Nkx6-1Q99MA9 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
Nkx6-1Q99MA9 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Nkx6-1Q99MA9 Olfr575-202ENSMUST00000213477 3512 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
Nkx6-1Q99MA9 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Nkx6-1Q99MA9 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Nkx6-1Q99MA9 Mir872-201ENSMUST00000104728 81 ntBASIC3.71□□□□□ -1.82
Nkx6-1Q99MA9 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC3.71□□□□□ -1.82
Nkx6-1Q99MA9 Gm12276-201ENSMUST00000121709 301 ntBASIC3.71□□□□□ -1.82
Nkx6-1Q99MA9 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Nkx6-1Q99MA9 Gm13852-201ENSMUST00000122350 242 ntBASIC3.71□□□□□ -1.82
Nkx6-1Q99MA9 Gm22380-201ENSMUST00000157479 95 ntBASIC3.71□□□□□ -1.82
Nkx6-1Q99MA9 Gm25834-201ENSMUST00000158916 101 ntBASIC3.71□□□□□ -1.82
Nkx6-1Q99MA9 Gm17528-201ENSMUST00000171026 239 ntBASIC3.71□□□□□ -1.82
Nkx6-1Q99MA9 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC3.71□□□□□ -1.82
Nkx6-1Q99MA9 Gm28500-201ENSMUST00000190286 151 ntBASIC3.71□□□□□ -1.82
Nkx6-1Q99MA9 Mir465d-201ENSMUST00000196314 58 ntBASIC3.71□□□□□ -1.82
Nkx6-1Q99MA9 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Nkx6-1Q99MA9 n-R5s182-201ENSMUST00000083889 107 ntBASIC3.71□□□□□ -1.82
Nkx6-1Q99MA9 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Nkx6-1Q99MA9 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
Nkx6-1Q99MA9 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Nkx6-1Q99MA9 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
Nkx6-1Q99MA9 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.71□□□□□ -1.82
Nkx6-1Q99MA9 Gm43751-201ENSMUST00000200275 3071 ntBASIC3.71□□□□□ -1.82
Nkx6-1Q99MA9 Gm10400-201ENSMUST00000203920 3835 ntBASIC3.71□□□□□ -1.82
Nkx6-1Q99MA9 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Nkx6-1Q99MA9 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Nkx6-1Q99MA9 AC154677.1-201ENSMUST00000227636 2805 ntBASIC3.71□□□□□ -1.82
Nkx6-1Q99MA9 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Nkx6-1Q99MA9 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC3.7□□□□□ -1.82
Nkx6-1Q99MA9 Gm43404-201ENSMUST00000200424 2534 ntBASIC3.7□□□□□ -1.82
Nkx6-1Q99MA9 Gm13386-201ENSMUST00000117677 124 ntBASIC3.7□□□□□ -1.82
Nkx6-1Q99MA9 Gm13355-201ENSMUST00000117996 317 ntBASIC3.7□□□□□ -1.82
Nkx6-1Q99MA9 Gm11598-201ENSMUST00000119257 357 ntBASIC3.7□□□□□ -1.82
Nkx6-1Q99MA9 Gm23755-201ENSMUST00000157578 343 ntBASIC3.7□□□□□ -1.82
Nkx6-1Q99MA9 Gm24976-201ENSMUST00000158972 135 ntBASIC3.7□□□□□ -1.82
Nkx6-1Q99MA9 Gm23002-201ENSMUST00000179221 107 ntBASIC3.7□□□□□ -1.82
Nkx6-1Q99MA9 Gm26928-201ENSMUST00000182674 572 ntBASIC3.7□□□□□ -1.82
Nkx6-1Q99MA9 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC3.7□□□□□ -1.82
Nkx6-1Q99MA9 Gm17966-201ENSMUST00000193453 594 ntBASIC3.7□□□□□ -1.82
Nkx6-1Q99MA9 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC3.7□□□□□ -1.82
Nkx6-1Q99MA9 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC3.7□□□□□ -1.82
Nkx6-1Q99MA9 Gm19244-201ENSMUST00000204340 253 ntBASIC3.7□□□□□ -1.82
Nkx6-1Q99MA9 Gm44594-201ENSMUST00000208982 407 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 99.9 ms