Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC4.24□□□□□ -1.73
Clp1Q99LI9 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Clp1Q99LI9 Mir1b-201ENSMUST00000117012 122 ntBASIC4.24□□□□□ -1.73
Clp1Q99LI9 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC4.24□□□□□ -1.73
Clp1Q99LI9 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC4.24□□□□□ -1.73
Clp1Q99LI9 Gm22378-201ENSMUST00000157481 111 ntBASIC4.24□□□□□ -1.73
Clp1Q99LI9 Gm26373-201ENSMUST00000157833 103 ntBASIC4.24□□□□□ -1.73
Clp1Q99LI9 Gm22538-201ENSMUST00000158169 299 ntBASIC4.24□□□□□ -1.73
Clp1Q99LI9 Gm25436-201ENSMUST00000158275 145 ntBASIC4.24□□□□□ -1.73
Clp1Q99LI9 Gm22840-201ENSMUST00000158444 136 ntBASIC4.24□□□□□ -1.73
Clp1Q99LI9 Gm23860-201ENSMUST00000179446 132 ntBASIC4.24□□□□□ -1.73
Clp1Q99LI9 Gm27540-201ENSMUST00000184950 187 ntBASIC4.24□□□□□ -1.73
Clp1Q99LI9 Gm27392-201ENSMUST00000185041 101 ntBASIC4.24□□□□□ -1.73
Clp1Q99LI9 Gm5329-201ENSMUST00000186898 463 ntBASIC4.24□□□□□ -1.73
Clp1Q99LI9 Gm37001-201ENSMUST00000193377 190 ntBASIC4.24□□□□□ -1.73
Clp1Q99LI9 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Clp1Q99LI9 Gm23925-201ENSMUST00000082471 132 ntBASIC4.24□□□□□ -1.73
Clp1Q99LI9 Gm24147-201ENSMUST00000082763 144 ntBASIC4.24□□□□□ -1.73
Clp1Q99LI9 Gm23727-201ENSMUST00000083352 164 ntBASIC4.24□□□□□ -1.73
Clp1Q99LI9 Gm22744-201ENSMUST00000083444 65 ntBASIC4.24□□□□□ -1.73
Clp1Q99LI9 AC167360.1-201ENSMUST00000222596 2494 ntBASIC4.24□□□□□ -1.73
Clp1Q99LI9 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Clp1Q99LI9 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Clp1Q99LI9 Gm43889-201ENSMUST00000203950 3681 ntBASIC4.24□□□□□ -1.73
Clp1Q99LI9 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Clp1Q99LI9 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Clp1Q99LI9 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Clp1Q99LI9 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Clp1Q99LI9 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Clp1Q99LI9 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Clp1Q99LI9 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Clp1Q99LI9 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC4.23□□□□□ -1.73
Clp1Q99LI9 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Clp1Q99LI9 Mir676-201ENSMUST00000102443 89 ntBASIC4.23□□□□□ -1.73
Clp1Q99LI9 Gm24127-201ENSMUST00000104110 130 ntBASIC4.23□□□□□ -1.73
Clp1Q99LI9 Gm24318-201ENSMUST00000104490 131 ntBASIC4.23□□□□□ -1.73
Clp1Q99LI9 Gm23653-201ENSMUST00000116751 97 ntBASIC4.23□□□□□ -1.73
Clp1Q99LI9 Gm13419-201ENSMUST00000121711 271 ntBASIC4.23□□□□□ -1.73
Clp1Q99LI9 Gm25105-201ENSMUST00000122477 130 ntBASIC4.23□□□□□ -1.73
Clp1Q99LI9 Trav20-201ENSMUST00000142754 347 ntBASIC4.23□□□□□ -1.73
Clp1Q99LI9 Gm25115-201ENSMUST00000157187 140 ntBASIC4.23□□□□□ -1.73
Clp1Q99LI9 Mir6370-201ENSMUST00000183510 120 ntBASIC4.23□□□□□ -1.73
Clp1Q99LI9 Gm28627-201ENSMUST00000186141 453 ntBASIC4.23□□□□□ -1.73
Clp1Q99LI9 Gm29452-201ENSMUST00000187996 313 ntBASIC4.23□□□□□ -1.73
Clp1Q99LI9 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC4.23□□□□□ -1.73
Clp1Q99LI9 AC165284.1-201ENSMUST00000228614 458 ntBASIC4.23□□□□□ -1.73
Clp1Q99LI9 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC4.23□□□□□ -1.73
Clp1Q99LI9 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Clp1Q99LI9 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Clp1Q99LI9 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC4.22□□□□□ -1.73
Clp1Q99LI9 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Clp1Q99LI9 Gm16332-201ENSMUST00000134229 2967 ntBASIC4.22□□□□□ -1.73
Clp1Q99LI9 Gm23578-201ENSMUST00000103943 104 ntBASIC4.22□□□□□ -1.73
Clp1Q99LI9 Gm14922-201ENSMUST00000121131 163 ntBASIC4.22□□□□□ -1.73
Clp1Q99LI9 Gm22026-201ENSMUST00000122735 281 ntBASIC4.22□□□□□ -1.73
Clp1Q99LI9 Gm23002-201ENSMUST00000179221 107 ntBASIC4.22□□□□□ -1.73
Clp1Q99LI9 Mir7676-1-201ENSMUST00000183491 62 ntBASIC4.22□□□□□ -1.73
Clp1Q99LI9 Mir7676-2-201ENSMUST00000183523 62 ntBASIC4.22□□□□□ -1.73
Clp1Q99LI9 Gm37343-201ENSMUST00000192542 111 ntBASIC4.22□□□□□ -1.73
Clp1Q99LI9 Gm44376-201ENSMUST00000197570 128 ntBASIC4.22□□□□□ -1.73
Clp1Q99LI9 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC4.22□□□□□ -1.73
Clp1Q99LI9 Gm45687-201ENSMUST00000209454 155 ntBASIC4.22□□□□□ -1.73
Clp1Q99LI9 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC4.22□□□□□ -1.73
Clp1Q99LI9 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC4.22□□□□□ -1.73
Clp1Q99LI9 AC125379.1-201ENSMUST00000221928 111 ntBASIC4.22□□□□□ -1.73
Clp1Q99LI9 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Clp1Q99LI9 AC133517.1-202ENSMUST00000224409 233 ntBASIC4.22□□□□□ -1.73
Clp1Q99LI9 AC166095.1-203ENSMUST00000224591 233 ntBASIC4.22□□□□□ -1.73
Clp1Q99LI9 Gm23518-201ENSMUST00000082835 153 ntBASIC4.22□□□□□ -1.73
Clp1Q99LI9 Gm22443-201ENSMUST00000082890 107 ntBASIC4.22□□□□□ -1.73
Clp1Q99LI9 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC4.22□□□□□ -1.73
Clp1Q99LI9 Gm42486-201ENSMUST00000200369 3486 ntBASIC4.22□□□□□ -1.73
Clp1Q99LI9 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
Clp1Q99LI9 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
Clp1Q99LI9 Olfr1309-206ENSMUST00000217452 5257 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Clp1Q99LI9 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Clp1Q99LI9 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Clp1Q99LI9 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC4.21□□□□□ -1.73
Clp1Q99LI9 Gm37461-201ENSMUST00000193929 3704 ntBASIC4.21□□□□□ -1.73
Clp1Q99LI9 Gm37655-201ENSMUST00000193968 4123 ntBASIC4.21□□□□□ -1.74
Clp1Q99LI9 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Clp1Q99LI9 Gm44283-201ENSMUST00000204461 3950 ntBASIC4.21□□□□□ -1.74
Clp1Q99LI9 Gm25272-201ENSMUST00000104293 128 ntBASIC4.21□□□□□ -1.74
Clp1Q99LI9 Gm26279-201ENSMUST00000157095 102 ntBASIC4.21□□□□□ -1.74
Clp1Q99LI9 Gm22537-201ENSMUST00000158172 199 ntBASIC4.21□□□□□ -1.74
Clp1Q99LI9 Gm25863-201ENSMUST00000158249 329 ntBASIC4.21□□□□□ -1.74
Clp1Q99LI9 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC4.21□□□□□ -1.74
Clp1Q99LI9 Gm27220-201ENSMUST00000183453 262 ntBASIC4.21□□□□□ -1.74
Clp1Q99LI9 Gm3086-202ENSMUST00000221248 310 ntBASIC4.21□□□□□ -1.74
Clp1Q99LI9 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Clp1Q99LI9 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Clp1Q99LI9 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Clp1Q99LI9 Olfr418-202ENSMUST00000213420 4388 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Clp1Q99LI9 Gm24582-201ENSMUST00000103967 103 ntBASIC4.2□□□□□ -1.74
Clp1Q99LI9 Gm15183-201ENSMUST00000118933 348 ntBASIC4.2□□□□□ -1.74
Clp1Q99LI9 Gm14775-201ENSMUST00000122089 310 ntBASIC4.2□□□□□ -1.74
Clp1Q99LI9 Gm14402-201ENSMUST00000122217 508 ntBASIC4.2□□□□□ -1.74
Clp1Q99LI9 Gm25783-201ENSMUST00000122525 190 ntBASIC4.2□□□□□ -1.74
Clp1Q99LI9 n-R5s68-201ENSMUST00000122639 82 ntBASIC4.2□□□□□ -1.74
Clp1Q99LI9 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC4.2□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms