Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Ushbp1Q8R370 Gm13903-201ENSMUST00000120945 193 ntBASIC3.74□□□□□ -1.81
Ushbp1Q8R370 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Ushbp1Q8R370 Gm25184-201ENSMUST00000157753 163 ntBASIC3.74□□□□□ -1.81
Ushbp1Q8R370 Gm23581-201ENSMUST00000158531 63 ntBASIC3.74□□□□□ -1.81
Ushbp1Q8R370 Gm17062-201ENSMUST00000166987 461 ntBASIC3.74□□□□□ -1.81
Ushbp1Q8R370 Gm27410-201ENSMUST00000183851 115 ntBASIC3.74□□□□□ -1.81
Ushbp1Q8R370 Mir6905-201ENSMUST00000184228 70 ntBASIC3.74□□□□□ -1.81
Ushbp1Q8R370 Gm29512-201ENSMUST00000185544 315 ntBASIC3.74□□□□□ -1.81
Ushbp1Q8R370 Gm28110-201ENSMUST00000185782 315 ntBASIC3.74□□□□□ -1.81
Ushbp1Q8R370 Gm28838-201ENSMUST00000186338 315 ntBASIC3.74□□□□□ -1.81
Ushbp1Q8R370 Gm29057-201ENSMUST00000186468 315 ntBASIC3.74□□□□□ -1.81
Ushbp1Q8R370 Gm29661-201ENSMUST00000186781 315 ntBASIC3.74□□□□□ -1.81
Ushbp1Q8R370 Gm28737-201ENSMUST00000186808 315 ntBASIC3.74□□□□□ -1.81
Ushbp1Q8R370 Gm29118-201ENSMUST00000186908 315 ntBASIC3.74□□□□□ -1.81
Ushbp1Q8R370 Gm28433-201ENSMUST00000187085 315 ntBASIC3.74□□□□□ -1.81
Ushbp1Q8R370 Gm29635-201ENSMUST00000187221 315 ntBASIC3.74□□□□□ -1.81
Ushbp1Q8R370 Gm28759-201ENSMUST00000187621 315 ntBASIC3.74□□□□□ -1.81
Ushbp1Q8R370 Gm28831-201ENSMUST00000187739 315 ntBASIC3.74□□□□□ -1.81
Ushbp1Q8R370 Gm28200-201ENSMUST00000187778 315 ntBASIC3.74□□□□□ -1.81
Ushbp1Q8R370 Gm29026-201ENSMUST00000187787 315 ntBASIC3.74□□□□□ -1.81
Ushbp1Q8R370 Gm28752-201ENSMUST00000188340 315 ntBASIC3.74□□□□□ -1.81
Ushbp1Q8R370 Gm28797-201ENSMUST00000188543 315 ntBASIC3.74□□□□□ -1.81
Ushbp1Q8R370 Gm28855-201ENSMUST00000188680 315 ntBASIC3.74□□□□□ -1.81
Ushbp1Q8R370 Gm29378-201ENSMUST00000188723 315 ntBASIC3.74□□□□□ -1.81
Ushbp1Q8R370 Gm28569-201ENSMUST00000188748 315 ntBASIC3.74□□□□□ -1.81
Ushbp1Q8R370 Gm28120-201ENSMUST00000188812 315 ntBASIC3.74□□□□□ -1.81
Ushbp1Q8R370 Gm28369-201ENSMUST00000188993 315 ntBASIC3.74□□□□□ -1.81
Ushbp1Q8R370 Gm29037-201ENSMUST00000189092 313 ntBASIC3.74□□□□□ -1.81
Ushbp1Q8R370 Gm28909-201ENSMUST00000189406 315 ntBASIC3.74□□□□□ -1.81
Ushbp1Q8R370 Gm28705-201ENSMUST00000189548 315 ntBASIC3.74□□□□□ -1.81
Ushbp1Q8R370 Gm28861-201ENSMUST00000189681 315 ntBASIC3.74□□□□□ -1.81
Ushbp1Q8R370 Gm29180-201ENSMUST00000190003 315 ntBASIC3.74□□□□□ -1.81
Ushbp1Q8R370 Gm28939-201ENSMUST00000190351 315 ntBASIC3.74□□□□□ -1.81
Ushbp1Q8R370 Gm28223-201ENSMUST00000190469 315 ntBASIC3.74□□□□□ -1.81
Ushbp1Q8R370 Gm29575-201ENSMUST00000190597 315 ntBASIC3.74□□□□□ -1.81
Ushbp1Q8R370 Gm29092-201ENSMUST00000190768 315 ntBASIC3.74□□□□□ -1.81
Ushbp1Q8R370 Gm29469-201ENSMUST00000191448 315 ntBASIC3.74□□□□□ -1.81
Ushbp1Q8R370 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Ushbp1Q8R370 Gm18453-201ENSMUST00000208000 626 ntBASIC3.74□□□□□ -1.81
Ushbp1Q8R370 Olfr1285-201ENSMUST00000208523 903 ntBASIC3.74□□□□□ -1.81
Ushbp1Q8R370 Gm25793-201ENSMUST00000083287 107 ntBASIC3.74□□□□□ -1.81
Ushbp1Q8R370 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
Ushbp1Q8R370 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
Ushbp1Q8R370 Gm19428-201ENSMUST00000220512 1995 ntBASIC3.74□□□□□ -1.81
Ushbp1Q8R370 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
Ushbp1Q8R370 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Ushbp1Q8R370 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Ushbp1Q8R370 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Ushbp1Q8R370 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
Ushbp1Q8R370 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Ushbp1Q8R370 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Ushbp1Q8R370 Gm42639-201ENSMUST00000197061 1871 ntBASIC3.73□□□□□ -1.81
Ushbp1Q8R370 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Ushbp1Q8R370 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
Ushbp1Q8R370 Mir291a-201ENSMUST00000104815 82 ntBASIC3.73□□□□□ -1.81
Ushbp1Q8R370 Gm11388-201ENSMUST00000120908 159 ntBASIC3.73□□□□□ -1.81
Ushbp1Q8R370 Gm14581-201ENSMUST00000121726 198 ntBASIC3.73□□□□□ -1.81
Ushbp1Q8R370 Gm11471-201ENSMUST00000121824 198 ntBASIC3.73□□□□□ -1.81
Ushbp1Q8R370 Gm6265-201ENSMUST00000149263 231 ntBASIC3.73□□□□□ -1.81
Ushbp1Q8R370 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC3.73□□□□□ -1.81
Ushbp1Q8R370 Gm23752-201ENSMUST00000157584 115 ntBASIC3.73□□□□□ -1.81
Ushbp1Q8R370 Gm25486-201ENSMUST00000158726 63 ntBASIC3.73□□□□□ -1.81
Ushbp1Q8R370 Gm17117-201ENSMUST00000163665 299 ntBASIC3.73□□□□□ -1.81
Ushbp1Q8R370 Gm22448-201ENSMUST00000179254 107 ntBASIC3.73□□□□□ -1.81
Ushbp1Q8R370 Mir195b-201ENSMUST00000184814 97 ntBASIC3.73□□□□□ -1.81
Ushbp1Q8R370 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
Ushbp1Q8R370 Gm37338-201ENSMUST00000191986 127 ntBASIC3.73□□□□□ -1.81
Ushbp1Q8R370 Gm44393-201ENSMUST00000197418 138 ntBASIC3.73□□□□□ -1.81
Ushbp1Q8R370 Gm42621-201ENSMUST00000198114 275 ntBASIC3.73□□□□□ -1.81
Ushbp1Q8R370 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC3.73□□□□□ -1.81
Ushbp1Q8R370 Gm43932-201ENSMUST00000204499 52 ntBASIC3.73□□□□□ -1.81
Ushbp1Q8R370 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC3.73□□□□□ -1.81
Ushbp1Q8R370 Gm39147-201ENSMUST00000211376 465 ntBASIC3.73□□□□□ -1.81
Ushbp1Q8R370 AC153864.2-201ENSMUST00000220424 292 ntBASIC3.73□□□□□ -1.81
Ushbp1Q8R370 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Ushbp1Q8R370 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
Ushbp1Q8R370 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Ushbp1Q8R370 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Ushbp1Q8R370 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Ushbp1Q8R370 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Ushbp1Q8R370 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Ushbp1Q8R370 Gm7470-201ENSMUST00000194219 2095 ntBASIC3.72□□□□□ -1.81
Ushbp1Q8R370 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Ushbp1Q8R370 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Ushbp1Q8R370 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.72□□□□□ -1.81
Ushbp1Q8R370 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Ushbp1Q8R370 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Ushbp1Q8R370 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ushbp1Q8R370 Gm14940-201ENSMUST00000119309 495 ntBASIC3.72□□□□□ -1.81
Ushbp1Q8R370 Gm13541-201ENSMUST00000119519 283 ntBASIC3.72□□□□□ -1.81
Ushbp1Q8R370 Gm12785-201ENSMUST00000122052 172 ntBASIC3.72□□□□□ -1.81
Ushbp1Q8R370 Gm23262-201ENSMUST00000158323 168 ntBASIC3.72□□□□□ -1.81
Ushbp1Q8R370 Gm10075-201ENSMUST00000162030 545 ntBASIC3.72□□□□□ -1.81
Ushbp1Q8R370 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Ushbp1Q8R370 Gm22910-201ENSMUST00000178568 132 ntBASIC3.72□□□□□ -1.81
Ushbp1Q8R370 Mir6371-201ENSMUST00000184470 111 ntBASIC3.72□□□□□ -1.81
Ushbp1Q8R370 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.72□□□□□ -1.81
Ushbp1Q8R370 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC3.72□□□□□ -1.81
Ushbp1Q8R370 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms