Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Syne4Q8CII8 Gm23886-201ENSMUST00000122684 313 ntBASIC3.39□□□□□ -1.87
Syne4Q8CII8 Gm16218-201ENSMUST00000155424 388 ntBASIC3.39□□□□□ -1.87
Syne4Q8CII8 Gm25280-201ENSMUST00000157269 101 ntBASIC3.39□□□□□ -1.87
Syne4Q8CII8 Gm22560-201ENSMUST00000157332 120 ntBASIC3.39□□□□□ -1.87
Syne4Q8CII8 Gm26402-201ENSMUST00000158499 113 ntBASIC3.39□□□□□ -1.87
Syne4Q8CII8 Gm25671-201ENSMUST00000178612 105 ntBASIC3.39□□□□□ -1.87
Syne4Q8CII8 Gm23307-201ENSMUST00000179167 105 ntBASIC3.39□□□□□ -1.87
Syne4Q8CII8 Gm25286-201ENSMUST00000179790 105 ntBASIC3.39□□□□□ -1.87
Syne4Q8CII8 Gm25528-201ENSMUST00000180264 132 ntBASIC3.39□□□□□ -1.87
Syne4Q8CII8 Mir7068-201ENSMUST00000183439 74 ntBASIC3.39□□□□□ -1.87
Syne4Q8CII8 Gm28418-201ENSMUST00000186179 423 ntBASIC3.39□□□□□ -1.87
Syne4Q8CII8 Ighv2-8-201ENSMUST00000193935 262 ntBASIC3.39□□□□□ -1.87
Syne4Q8CII8 Gm37404-201ENSMUST00000195726 359 ntBASIC3.39□□□□□ -1.87
Syne4Q8CII8 Gm44468-201ENSMUST00000199516 105 ntBASIC3.39□□□□□ -1.87
Syne4Q8CII8 Gm43415-201ENSMUST00000201934 750 ntBASIC3.39□□□□□ -1.87
Syne4Q8CII8 Gm19252-201ENSMUST00000204705 305 ntBASIC3.39□□□□□ -1.87
Syne4Q8CII8 Gm45452-201ENSMUST00000210905 177 ntBASIC3.39□□□□□ -1.87
Syne4Q8CII8 AC124400.1-201ENSMUST00000225779 193 ntBASIC3.39□□□□□ -1.87
Syne4Q8CII8 Gm25698-201ENSMUST00000082897 107 ntBASIC3.39□□□□□ -1.87
Syne4Q8CII8 Mir208a-201ENSMUST00000083498 83 ntBASIC3.39□□□□□ -1.87
Syne4Q8CII8 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Syne4Q8CII8 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.39□□□□□ -1.87
Syne4Q8CII8 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Syne4Q8CII8 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Syne4Q8CII8 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Syne4Q8CII8 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.38□□□□□ -1.87
Syne4Q8CII8 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Syne4Q8CII8 Gm22782-201ENSMUST00000104082 132 ntBASIC3.38□□□□□ -1.87
Syne4Q8CII8 Gm11859-201ENSMUST00000118099 455 ntBASIC3.38□□□□□ -1.87
Syne4Q8CII8 Gm13903-201ENSMUST00000120945 193 ntBASIC3.38□□□□□ -1.87
Syne4Q8CII8 Mir3076-201ENSMUST00000175415 60 ntBASIC3.38□□□□□ -1.87
Syne4Q8CII8 Gm27921-201ENSMUST00000183968 108 ntBASIC3.38□□□□□ -1.87
Syne4Q8CII8 Mir195b-201ENSMUST00000184814 97 ntBASIC3.38□□□□□ -1.87
Syne4Q8CII8 Igkv1-136-201ENSMUST00000200635 297 ntBASIC3.38□□□□□ -1.87
Syne4Q8CII8 Gm34314-201ENSMUST00000203622 367 ntBASIC3.38□□□□□ -1.87
Syne4Q8CII8 Gm35931-201ENSMUST00000203931 448 ntBASIC3.38□□□□□ -1.87
Syne4Q8CII8 Gm18453-201ENSMUST00000208000 626 ntBASIC3.38□□□□□ -1.87
Syne4Q8CII8 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Syne4Q8CII8 Gm18015-201ENSMUST00000214879 316 ntBASIC3.38□□□□□ -1.87
Syne4Q8CII8 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC3.38□□□□□ -1.87
Syne4Q8CII8 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC3.38□□□□□ -1.87
Syne4Q8CII8 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC3.38□□□□□ -1.87
Syne4Q8CII8 AC163295.1-201ENSMUST00000227840 314 ntBASIC3.38□□□□□ -1.87
Syne4Q8CII8 Mir103-2-201ENSMUST00000083629 86 ntBASIC3.38□□□□□ -1.87
Syne4Q8CII8 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Syne4Q8CII8 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Syne4Q8CII8 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
Syne4Q8CII8 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
Syne4Q8CII8 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Syne4Q8CII8 Gm25728-201ENSMUST00000104525 159 ntBASIC3.37□□□□□ -1.87
Syne4Q8CII8 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC3.37□□□□□ -1.87
Syne4Q8CII8 Gm25153-201ENSMUST00000157118 156 ntBASIC3.37□□□□□ -1.87
Syne4Q8CII8 Gm24504-201ENSMUST00000157679 100 ntBASIC3.37□□□□□ -1.87
Syne4Q8CII8 Gm22328-201ENSMUST00000158074 112 ntBASIC3.37□□□□□ -1.87
Syne4Q8CII8 Gm22534-201ENSMUST00000158173 104 ntBASIC3.37□□□□□ -1.87
Syne4Q8CII8 Gm22766-201ENSMUST00000158372 99 ntBASIC3.37□□□□□ -1.87
Syne4Q8CII8 Gm16232-201ENSMUST00000162856 167 ntBASIC3.37□□□□□ -1.87
Syne4Q8CII8 Mir5127-201ENSMUST00000175295 71 ntBASIC3.37□□□□□ -1.87
Syne4Q8CII8 Gm27640-201ENSMUST00000184580 147 ntBASIC3.37□□□□□ -1.87
Syne4Q8CII8 Gm9402-201ENSMUST00000196849 388 ntBASIC3.37□□□□□ -1.87
Syne4Q8CII8 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC3.37□□□□□ -1.87
Syne4Q8CII8 Gm43669-201ENSMUST00000198229 436 ntBASIC3.37□□□□□ -1.87
Syne4Q8CII8 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC3.37□□□□□ -1.87
Syne4Q8CII8 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC3.37□□□□□ -1.87
Syne4Q8CII8 AC069074.2-201ENSMUST00000217819 428 ntBASIC3.37□□□□□ -1.87
Syne4Q8CII8 CT485612.4-201ENSMUST00000223405 250 ntBASIC3.37□□□□□ -1.87
Syne4Q8CII8 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Syne4Q8CII8 Gm37788-201ENSMUST00000193958 2705 ntBASIC3.36□□□□□ -1.87
Syne4Q8CII8 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Syne4Q8CII8 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Syne4Q8CII8 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Syne4Q8CII8 Gm37761-201ENSMUST00000194989 2098 ntBASIC3.36□□□□□ -1.87
Syne4Q8CII8 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Syne4Q8CII8 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Syne4Q8CII8 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Syne4Q8CII8 Gm26247-201ENSMUST00000116702 91 ntBASIC3.36□□□□□ -1.87
Syne4Q8CII8 Gm15379-201ENSMUST00000121224 648 ntBASIC3.36□□□□□ -1.87
Syne4Q8CII8 Gm23213-201ENSMUST00000122715 313 ntBASIC3.36□□□□□ -1.87
Syne4Q8CII8 Gm25392-201ENSMUST00000157335 297 ntBASIC3.36□□□□□ -1.87
Syne4Q8CII8 Gm23557-201ENSMUST00000157820 138 ntBASIC3.36□□□□□ -1.87
Syne4Q8CII8 Gm27510-201ENSMUST00000158214 64 ntBASIC3.36□□□□□ -1.87
Syne4Q8CII8 Gm17062-201ENSMUST00000166987 461 ntBASIC3.36□□□□□ -1.87
Syne4Q8CII8 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC3.36□□□□□ -1.87
Syne4Q8CII8 Gm20542-201ENSMUST00000174582 372 ntBASIC3.36□□□□□ -1.87
Syne4Q8CII8 Gm24816-201ENSMUST00000175311 151 ntBASIC3.36□□□□□ -1.87
Syne4Q8CII8 Gm26585-201ENSMUST00000180890 630 ntBASIC3.36□□□□□ -1.87
Syne4Q8CII8 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Syne4Q8CII8 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Syne4Q8CII8 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Syne4Q8CII8 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC3.36□□□□□ -1.87
Syne4Q8CII8 AC174457.1-201ENSMUST00000215932 226 ntBASIC3.36□□□□□ -1.87
Syne4Q8CII8 CT030247.1-201ENSMUST00000216810 267 ntBASIC3.36□□□□□ -1.87
Syne4Q8CII8 AC113031.4-201ENSMUST00000228381 514 ntBASIC3.36□□□□□ -1.87
Syne4Q8CII8 Mir184-201ENSMUST00000083662 69 ntBASIC3.36□□□□□ -1.87
Syne4Q8CII8 Gm10212-201ENSMUST00000087884 324 ntBASIC3.36□□□□□ -1.87
Syne4Q8CII8 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.36□□□□□ -1.87
Syne4Q8CII8 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
Syne4Q8CII8 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
Syne4Q8CII8 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 145.8 ms