Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 AC122418.1-201ENSMUST00000225012 511 ntBASIC3.61□□□□□ -1.83
Vps53Q8CCB4 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Vps53Q8CCB4 Gm26164-201ENSMUST00000083793 104 ntBASIC3.61□□□□□ -1.83
Vps53Q8CCB4 Gm24817-201ENSMUST00000093672 105 ntBASIC3.61□□□□□ -1.83
Vps53Q8CCB4 AC158979.1-201ENSMUST00000223594 2252 ntBASIC3.61□□□□□ -1.83
Vps53Q8CCB4 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.61□□□□□ -1.83
Vps53Q8CCB4 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
Vps53Q8CCB4 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Vps53Q8CCB4 AC121598.3-201ENSMUST00000227179 1643 ntBASIC3.6□□□□□ -1.83
Vps53Q8CCB4 Mir701-201ENSMUST00000102208 109 ntBASIC3.6□□□□□ -1.83
Vps53Q8CCB4 Gm13672-201ENSMUST00000117554 459 ntBASIC3.6□□□□□ -1.83
Vps53Q8CCB4 Gm16242-201ENSMUST00000117741 334 ntBASIC3.6□□□□□ -1.83
Vps53Q8CCB4 Gm14940-201ENSMUST00000119309 495 ntBASIC3.6□□□□□ -1.83
Vps53Q8CCB4 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC3.6□□□□□ -1.83
Vps53Q8CCB4 Gm22073-201ENSMUST00000122668 189 ntBASIC3.6□□□□□ -1.83
Vps53Q8CCB4 Gm22538-201ENSMUST00000158169 299 ntBASIC3.6□□□□□ -1.83
Vps53Q8CCB4 Gm17062-201ENSMUST00000166987 461 ntBASIC3.6□□□□□ -1.83
Vps53Q8CCB4 Gm8114-201ENSMUST00000172225 484 ntBASIC3.6□□□□□ -1.83
Vps53Q8CCB4 Mir7014-201ENSMUST00000183853 63 ntBASIC3.6□□□□□ -1.83
Vps53Q8CCB4 Igkv9-128-201ENSMUST00000196602 353 ntBASIC3.6□□□□□ -1.83
Vps53Q8CCB4 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC3.6□□□□□ -1.83
Vps53Q8CCB4 Gm45395-201ENSMUST00000209891 559 ntBASIC3.6□□□□□ -1.83
Vps53Q8CCB4 AC124537.1-201ENSMUST00000222890 159 ntBASIC3.6□□□□□ -1.83
Vps53Q8CCB4 AC239878.2-201ENSMUST00000224048 464 ntBASIC3.6□□□□□ -1.83
Vps53Q8CCB4 AC124746.2-201ENSMUST00000226594 427 ntBASIC3.6□□□□□ -1.83
Vps53Q8CCB4 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Vps53Q8CCB4 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Vps53Q8CCB4 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Vps53Q8CCB4 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
Vps53Q8CCB4 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Vps53Q8CCB4 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Vps53Q8CCB4 Gm42659-201ENSMUST00000196955 1754 ntBASIC3.59□□□□□ -1.83
Vps53Q8CCB4 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Vps53Q8CCB4 Mir693-201ENSMUST00000102187 89 ntBASIC3.59□□□□□ -1.83
Vps53Q8CCB4 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC3.59□□□□□ -1.83
Vps53Q8CCB4 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC3.59□□□□□ -1.83
Vps53Q8CCB4 Gm23262-201ENSMUST00000158323 168 ntBASIC3.59□□□□□ -1.83
Vps53Q8CCB4 Gm26400-201ENSMUST00000175012 85 ntBASIC3.59□□□□□ -1.83
Vps53Q8CCB4 Gm24618-201ENSMUST00000177718 94 ntBASIC3.59□□□□□ -1.83
Vps53Q8CCB4 Gm23953-201ENSMUST00000178214 94 ntBASIC3.59□□□□□ -1.83
Vps53Q8CCB4 Gm22448-201ENSMUST00000179254 107 ntBASIC3.59□□□□□ -1.83
Vps53Q8CCB4 Gm26332-201ENSMUST00000179813 94 ntBASIC3.59□□□□□ -1.83
Vps53Q8CCB4 Gm22863-201ENSMUST00000180265 94 ntBASIC3.59□□□□□ -1.83
Vps53Q8CCB4 Gm44419-201ENSMUST00000203338 229 ntBASIC3.59□□□□□ -1.83
Vps53Q8CCB4 Gm43955-201ENSMUST00000204332 142 ntBASIC3.59□□□□□ -1.83
Vps53Q8CCB4 AC153864.2-201ENSMUST00000220424 292 ntBASIC3.59□□□□□ -1.83
Vps53Q8CCB4 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
Vps53Q8CCB4 Gm44925-201ENSMUST00000208879 2110 ntBASIC3.59□□□□□ -1.84
Vps53Q8CCB4 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
Vps53Q8CCB4 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Vps53Q8CCB4 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Vps53Q8CCB4 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Vps53Q8CCB4 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Vps53Q8CCB4 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC3.58□□□□□ -1.84
Vps53Q8CCB4 Gm13504-201ENSMUST00000117490 316 ntBASIC3.58□□□□□ -1.84
Vps53Q8CCB4 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC3.58□□□□□ -1.84
Vps53Q8CCB4 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Vps53Q8CCB4 Gm24787-201ENSMUST00000157380 123 ntBASIC3.58□□□□□ -1.84
Vps53Q8CCB4 Gm23557-201ENSMUST00000157820 138 ntBASIC3.58□□□□□ -1.84
Vps53Q8CCB4 Gm22516-201ENSMUST00000158266 124 ntBASIC3.58□□□□□ -1.84
Vps53Q8CCB4 Gm26214-201ENSMUST00000158581 107 ntBASIC3.58□□□□□ -1.84
Vps53Q8CCB4 Mir3470b-201ENSMUST00000175563 126 ntBASIC3.58□□□□□ -1.84
Vps53Q8CCB4 Gm27999-201ENSMUST00000183539 193 ntBASIC3.58□□□□□ -1.84
Vps53Q8CCB4 Mir6335-201ENSMUST00000184081 98 ntBASIC3.58□□□□□ -1.84
Vps53Q8CCB4 Mir8096-201ENSMUST00000184526 127 ntBASIC3.58□□□□□ -1.84
Vps53Q8CCB4 Gm28358-202ENSMUST00000189292 223 ntBASIC3.58□□□□□ -1.84
Vps53Q8CCB4 Gm42647-201ENSMUST00000195939 459 ntBASIC3.58□□□□□ -1.84
Vps53Q8CCB4 Gm43739-201ENSMUST00000198294 307 ntBASIC3.58□□□□□ -1.84
Vps53Q8CCB4 Gm44055-201ENSMUST00000204376 247 ntBASIC3.58□□□□□ -1.84
Vps53Q8CCB4 AC129202.2-201ENSMUST00000225123 177 ntBASIC3.58□□□□□ -1.84
Vps53Q8CCB4 AC164100.1-201ENSMUST00000227214 508 ntBASIC3.58□□□□□ -1.84
Vps53Q8CCB4 Gm22979-201ENSMUST00000082609 159 ntBASIC3.58□□□□□ -1.84
Vps53Q8CCB4 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.57□□□□□ -1.84
Vps53Q8CCB4 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC3.57□□□□□ -1.84
Vps53Q8CCB4 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Vps53Q8CCB4 Gm9009-201ENSMUST00000117321 326 ntBASIC3.57□□□□□ -1.84
Vps53Q8CCB4 Gm12793-201ENSMUST00000119268 292 ntBASIC3.57□□□□□ -1.84
Vps53Q8CCB4 Gm26477-201ENSMUST00000122617 323 ntBASIC3.57□□□□□ -1.84
Vps53Q8CCB4 Gm26101-201ENSMUST00000157246 105 ntBASIC3.57□□□□□ -1.84
Vps53Q8CCB4 Gm24720-201ENSMUST00000157518 166 ntBASIC3.57□□□□□ -1.84
Vps53Q8CCB4 Gm23752-201ENSMUST00000157584 115 ntBASIC3.57□□□□□ -1.84
Vps53Q8CCB4 Gm23120-201ENSMUST00000157654 287 ntBASIC3.57□□□□□ -1.84
Vps53Q8CCB4 Gm22328-201ENSMUST00000158074 112 ntBASIC3.57□□□□□ -1.84
Vps53Q8CCB4 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC3.57□□□□□ -1.84
Vps53Q8CCB4 Mir3092-201ENSMUST00000174954 96 ntBASIC3.57□□□□□ -1.84
Vps53Q8CCB4 Mir195b-201ENSMUST00000184814 97 ntBASIC3.57□□□□□ -1.84
Vps53Q8CCB4 Gm29512-201ENSMUST00000185544 315 ntBASIC3.57□□□□□ -1.84
Vps53Q8CCB4 Gm28110-201ENSMUST00000185782 315 ntBASIC3.57□□□□□ -1.84
Vps53Q8CCB4 Gm28838-201ENSMUST00000186338 315 ntBASIC3.57□□□□□ -1.84
Vps53Q8CCB4 Gm29057-201ENSMUST00000186468 315 ntBASIC3.57□□□□□ -1.84
Vps53Q8CCB4 Gm29661-201ENSMUST00000186781 315 ntBASIC3.57□□□□□ -1.84
Vps53Q8CCB4 Gm28737-201ENSMUST00000186808 315 ntBASIC3.57□□□□□ -1.84
Vps53Q8CCB4 Gm29118-201ENSMUST00000186908 315 ntBASIC3.57□□□□□ -1.84
Vps53Q8CCB4 Gm28433-201ENSMUST00000187085 315 ntBASIC3.57□□□□□ -1.84
Vps53Q8CCB4 Gm29635-201ENSMUST00000187221 315 ntBASIC3.57□□□□□ -1.84
Vps53Q8CCB4 Gm28759-201ENSMUST00000187621 315 ntBASIC3.57□□□□□ -1.84
Vps53Q8CCB4 Gm28831-201ENSMUST00000187739 315 ntBASIC3.57□□□□□ -1.84
Vps53Q8CCB4 Gm28200-201ENSMUST00000187778 315 ntBASIC3.57□□□□□ -1.84
Vps53Q8CCB4 Gm29026-201ENSMUST00000187787 315 ntBASIC3.57□□□□□ -1.84
Vps53Q8CCB4 Gm28752-201ENSMUST00000188340 315 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 526.1 ms