Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm24911-201ENSMUST00000157292 136 ntBASIC0.67□□□□□ -2.3
Col6a6Q8C6K9 Gm23933-201ENSMUST00000178405 79 ntBASIC0.67□□□□□ -2.3
Col6a6Q8C6K9 Gm27761-201ENSMUST00000184091 131 ntBASIC0.67□□□□□ -2.3
Col6a6Q8C6K9 Mir6376-201ENSMUST00000185149 131 ntBASIC0.67□□□□□ -2.3
Col6a6Q8C6K9 Gm45616-201ENSMUST00000211711 319 ntBASIC0.67□□□□□ -2.3
Col6a6Q8C6K9 AC132954.1-201ENSMUST00000221017 342 ntBASIC0.67□□□□□ -2.3
Col6a6Q8C6K9 AC115357.1-201ENSMUST00000227575 466 ntBASIC0.67□□□□□ -2.3
Col6a6Q8C6K9 Gm22270-201ENSMUST00000104034 132 ntBASIC0.67□□□□□ -2.3
Col6a6Q8C6K9 Gm22559-201ENSMUST00000157329 134 ntBASIC0.67□□□□□ -2.3
Col6a6Q8C6K9 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC0.67□□□□□ -2.3
Col6a6Q8C6K9 1700010K23Rik-201ENSMUST00000174502 376 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
Col6a6Q8C6K9 Mir3066-201ENSMUST00000175296 83 ntBASIC0.67□□□□□ -2.3
Col6a6Q8C6K9 Mir6338-201ENSMUST00000183389 109 ntBASIC0.67□□□□□ -2.3
Col6a6Q8C6K9 Gm29603-201ENSMUST00000186792 334 ntBASIC0.67□□□□□ -2.3
Col6a6Q8C6K9 Gm31511-201ENSMUST00000193134 657 ntBASIC0.67□□□□□ -2.3
Col6a6Q8C6K9 Gm29815-201ENSMUST00000202418 178 ntBASIC0.67□□□□□ -2.3
Col6a6Q8C6K9 AC164567.2-201ENSMUST00000219363 445 ntBASIC0.67□□□□□ -2.3
Col6a6Q8C6K9 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.67□□□□□ -2.3
Col6a6Q8C6K9 Gm25792-201ENSMUST00000083289 100 ntBASIC0.67□□□□□ -2.3
Col6a6Q8C6K9 Mir300-201ENSMUST00000083485 79 ntBASIC0.67□□□□□ -2.3
Col6a6Q8C6K9 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
Col6a6Q8C6K9 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
Col6a6Q8C6K9 Gm43047-201ENSMUST00000200089 3460 ntBASIC0.66□□□□□ -2.3
Col6a6Q8C6K9 Mdga2-203ENSMUST00000113942 423 ntBASIC0.66□□□□□ -2.3
Col6a6Q8C6K9 Gm11991-201ENSMUST00000119652 1074 ntBASIC0.66□□□□□ -2.3
Col6a6Q8C6K9 Gm22535-201ENSMUST00000158174 119 ntBASIC0.66□□□□□ -2.3
Col6a6Q8C6K9 Gm25432-201ENSMUST00000158284 66 ntBASIC0.66□□□□□ -2.3
Col6a6Q8C6K9 Gm23116-201ENSMUST00000158481 67 ntBASIC0.66□□□□□ -2.3
Col6a6Q8C6K9 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC0.66□□□□□ -2.3
Col6a6Q8C6K9 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC0.66□□□□□ -2.3
Col6a6Q8C6K9 Gm17990-201ENSMUST00000211728 553 ntBASIC0.66□□□□□ -2.3
Col6a6Q8C6K9 Gm19326-201ENSMUST00000219818 326 ntBASIC0.66□□□□□ -2.3
Col6a6Q8C6K9 Mir804-201ENSMUST00000103251 95 ntBASIC0.66□□□□□ -2.3
Col6a6Q8C6K9 Gm11384-201ENSMUST00000121376 303 ntBASIC0.66□□□□□ -2.3
Col6a6Q8C6K9 Snord87-201ENSMUST00000175437 87 ntBASIC0.66□□□□□ -2.3
Col6a6Q8C6K9 Gm9830-201ENSMUST00000178509 357 ntBASIC0.66□□□□□ -2.3
Col6a6Q8C6K9 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC0.66□□□□□ -2.3
Col6a6Q8C6K9 Gm18747-201ENSMUST00000198129 648 ntBASIC0.66□□□□□ -2.3
Col6a6Q8C6K9 Mir137-201ENSMUST00000083635 73 ntBASIC0.66□□□□□ -2.3
Col6a6Q8C6K9 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.31
Col6a6Q8C6K9 Gm22447-201ENSMUST00000158155 92 ntBASIC0.65□□□□□ -2.31
Col6a6Q8C6K9 Gm25838-201ENSMUST00000158920 120 ntBASIC0.65□□□□□ -2.31
Col6a6Q8C6K9 Gm24304-201ENSMUST00000177635 107 ntBASIC0.65□□□□□ -2.31
Col6a6Q8C6K9 Gm25944-201ENSMUST00000178758 94 ntBASIC0.65□□□□□ -2.31
Col6a6Q8C6K9 Gm27028-201ENSMUST00000182303 399 ntBASIC0.65□□□□□ -2.31
Col6a6Q8C6K9 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
Col6a6Q8C6K9 Gm44472-201ENSMUST00000204922 943 ntBASIC0.65□□□□□ -2.31
Col6a6Q8C6K9 Gm45071-201ENSMUST00000205353 571 ntBASIC0.65□□□□□ -2.31
Col6a6Q8C6K9 Gm44720-201ENSMUST00000206076 260 ntBASIC0.65□□□□□ -2.31
Col6a6Q8C6K9 Gm45590-201ENSMUST00000209715 262 ntBASIC0.65□□□□□ -2.31
Col6a6Q8C6K9 AC163357.1-201ENSMUST00000220847 233 ntBASIC0.65□□□□□ -2.31
Col6a6Q8C6K9 Gm23735-201ENSMUST00000082551 134 ntBASIC0.65□□□□□ -2.31
Col6a6Q8C6K9 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0.65□□□□□ -2.31
Col6a6Q8C6K9 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
Col6a6Q8C6K9 Gm12096-201ENSMUST00000121149 829 ntBASIC0.64□□□□□ -2.31
Col6a6Q8C6K9 Gm16038-201ENSMUST00000159317 193 ntBASIC0.64□□□□□ -2.31
Col6a6Q8C6K9 Gm18956-201ENSMUST00000192857 480 ntBASIC0.64□□□□□ -2.31
Col6a6Q8C6K9 Gm29754-201ENSMUST00000206269 358 ntBASIC0.64□□□□□ -2.31
Col6a6Q8C6K9 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
Col6a6Q8C6K9 Gm44286-201ENSMUST00000204098 1487 ntBASIC0.64□□□□□ -2.31
Col6a6Q8C6K9 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
Col6a6Q8C6K9 Gm14980-201ENSMUST00000121247 736 ntBASIC0.64□□□□□ -2.31
Col6a6Q8C6K9 Gm6182-201ENSMUST00000156439 1208 ntBASIC0.64□□□□□ -2.31
Col6a6Q8C6K9 Gm24086-201ENSMUST00000175171 98 ntBASIC0.64□□□□□ -2.31
Col6a6Q8C6K9 Mir3112-201ENSMUST00000175431 82 ntBASIC0.64□□□□□ -2.31
Col6a6Q8C6K9 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC0.64□□□□□ -2.31
Col6a6Q8C6K9 Gm27722-201ENSMUST00000183908 76 ntBASIC0.64□□□□□ -2.31
Col6a6Q8C6K9 Mir7077-201ENSMUST00000183991 57 ntBASIC0.64□□□□□ -2.31
Col6a6Q8C6K9 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
Col6a6Q8C6K9 Gm34701-202ENSMUST00000204685 360 ntBASIC0.64□□□□□ -2.31
Col6a6Q8C6K9 Gm2446-201ENSMUST00000220144 772 ntBASIC0.64□□□□□ -2.31
Col6a6Q8C6K9 Gm23100-201ENSMUST00000083455 141 ntBASIC0.64□□□□□ -2.31
Col6a6Q8C6K9 Mir325-201ENSMUST00000083491 98 ntBASIC0.64□□□□□ -2.31
Col6a6Q8C6K9 Gm5583-201ENSMUST00000174328 1519 ntBASIC0.64□□□□□ -2.31
Col6a6Q8C6K9 AC117226.1-201ENSMUST00000221635 3737 ntBASIC0.63□□□□□ -2.31
Col6a6Q8C6K9 Mir223-201ENSMUST00000102112 110 ntBASIC0.63□□□□□ -2.31
Col6a6Q8C6K9 Gm15497-201ENSMUST00000119137 551 ntBASIC0.63□□□□□ -2.31
Col6a6Q8C6K9 Adgrg4-206ENSMUST00000168724 531 ntBASIC0.63□□□□□ -2.31
Col6a6Q8C6K9 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
Col6a6Q8C6K9 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
Col6a6Q8C6K9 Gm26960-201ENSMUST00000182263 412 ntBASIC0.63□□□□□ -2.31
Col6a6Q8C6K9 Gm7329-201ENSMUST00000185915 210 ntBASIC0.63□□□□□ -2.31
Col6a6Q8C6K9 Gm44655-201ENSMUST00000207768 423 ntBASIC0.63□□□□□ -2.31
Col6a6Q8C6K9 AC158803.1-201ENSMUST00000219495 316 ntBASIC0.63□□□□□ -2.31
Col6a6Q8C6K9 Gm25079-201ENSMUST00000082529 203 ntBASIC0.63□□□□□ -2.31
Col6a6Q8C6K9 Mir107-201ENSMUST00000083660 87 ntBASIC0.63□□□□□ -2.31
Col6a6Q8C6K9 Gm14932-201ENSMUST00000117112 453 ntBASIC0.63□□□□□ -2.31
Col6a6Q8C6K9 Gm13085-201ENSMUST00000118356 171 ntBASIC0.63□□□□□ -2.31
Col6a6Q8C6K9 Gm4916-201ENSMUST00000126139 642 ntBASIC0.63□□□□□ -2.31
Col6a6Q8C6K9 Gm44182-201ENSMUST00000204052 115 ntBASIC0.63□□□□□ -2.31
Col6a6Q8C6K9 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC0.63□□□□□ -2.31
Col6a6Q8C6K9 Gm45386-201ENSMUST00000210194 218 ntBASIC0.63□□□□□ -2.31
Col6a6Q8C6K9 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC0.63□□□□□ -2.31
Col6a6Q8C6K9 CT572985.2-201ENSMUST00000220496 211 ntBASIC0.63□□□□□ -2.31
Col6a6Q8C6K9 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC0.62□□□□□ -2.31
Col6a6Q8C6K9 Gm14674-201ENSMUST00000117816 342 ntBASIC0.62□□□□□ -2.31
Col6a6Q8C6K9 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC0.62□□□□□ -2.31
Col6a6Q8C6K9 Gm11389-201ENSMUST00000121407 430 ntBASIC0.62□□□□□ -2.31
Col6a6Q8C6K9 Defa-ps6-201ENSMUST00000122172 282 ntBASIC0.62□□□□□ -2.31
Col6a6Q8C6K9 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC0.62□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 88.6 ms