Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm25883-201ENSMUST00000157781 271 ntBASIC4.39□□□□□ -1.71
Usp40Q8BWR4 Gm22187-201ENSMUST00000157819 129 ntBASIC4.39□□□□□ -1.71
Usp40Q8BWR4 Gm22097-201ENSMUST00000157929 278 ntBASIC4.39□□□□□ -1.71
Usp40Q8BWR4 Gm24085-201ENSMUST00000175172 116 ntBASIC4.39□□□□□ -1.71
Usp40Q8BWR4 Gm27476-201ENSMUST00000183366 104 ntBASIC4.39□□□□□ -1.71
Usp40Q8BWR4 Gm18486-201ENSMUST00000184040 298 ntBASIC4.39□□□□□ -1.71
Usp40Q8BWR4 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC4.39□□□□□ -1.71
Usp40Q8BWR4 Gm43991-201ENSMUST00000203751 274 ntBASIC4.39□□□□□ -1.71
Usp40Q8BWR4 Gm44533-201ENSMUST00000207782 268 ntBASIC4.39□□□□□ -1.71
Usp40Q8BWR4 Gm24705-201ENSMUST00000082808 107 ntBASIC4.39□□□□□ -1.71
Usp40Q8BWR4 Gm26456-201ENSMUST00000082831 111 ntBASIC4.39□□□□□ -1.71
Usp40Q8BWR4 Gm23136-201ENSMUST00000083425 99 ntBASIC4.39□□□□□ -1.71
Usp40Q8BWR4 Gm42870-201ENSMUST00000199355 3470 ntBASIC4.39□□□□□ -1.71
Usp40Q8BWR4 Gm37645-201ENSMUST00000194285 3556 ntBASIC4.39□□□□□ -1.71
Usp40Q8BWR4 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Usp40Q8BWR4 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
Usp40Q8BWR4 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
Usp40Q8BWR4 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Usp40Q8BWR4 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
Usp40Q8BWR4 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Usp40Q8BWR4 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC4.38□□□□□ -1.71
Usp40Q8BWR4 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Usp40Q8BWR4 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Usp40Q8BWR4 Gm13504-201ENSMUST00000117490 316 ntBASIC4.38□□□□□ -1.71
Usp40Q8BWR4 Gm6897-201ENSMUST00000117714 138 ntBASIC4.38□□□□□ -1.71
Usp40Q8BWR4 Gm14758-201ENSMUST00000119104 138 ntBASIC4.38□□□□□ -1.71
Usp40Q8BWR4 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC4.38□□□□□ -1.71
Usp40Q8BWR4 Gm23380-201ENSMUST00000158448 103 ntBASIC4.38□□□□□ -1.71
Usp40Q8BWR4 Gm24348-201ENSMUST00000158710 130 ntBASIC4.38□□□□□ -1.71
Usp40Q8BWR4 Gm23197-201ENSMUST00000158809 112 ntBASIC4.38□□□□□ -1.71
Usp40Q8BWR4 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC4.38□□□□□ -1.71
Usp40Q8BWR4 Gm20526-201ENSMUST00000173416 158 ntBASIC4.38□□□□□ -1.71
Usp40Q8BWR4 Gm24304-201ENSMUST00000177635 107 ntBASIC4.38□□□□□ -1.71
Usp40Q8BWR4 Mir6346-201ENSMUST00000183982 81 ntBASIC4.38□□□□□ -1.71
Usp40Q8BWR4 Gm28453-203ENSMUST00000187041 189 ntBASIC4.38□□□□□ -1.71
Usp40Q8BWR4 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC4.38□□□□□ -1.71
Usp40Q8BWR4 Gm26449-201ENSMUST00000082452 104 ntBASIC4.38□□□□□ -1.71
Usp40Q8BWR4 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Usp40Q8BWR4 AC135119.1-201ENSMUST00000227935 3717 ntBASIC4.37□□□□□ -1.71
Usp40Q8BWR4 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Usp40Q8BWR4 Olfr1317-203ENSMUST00000214801 2578 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Usp40Q8BWR4 Gm24423-201ENSMUST00000101982 106 ntBASIC4.37□□□□□ -1.71
Usp40Q8BWR4 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Usp40Q8BWR4 Gm15162-201ENSMUST00000119325 283 ntBASIC4.37□□□□□ -1.71
Usp40Q8BWR4 Gm24596-201ENSMUST00000122504 107 ntBASIC4.37□□□□□ -1.71
Usp40Q8BWR4 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC4.37□□□□□ -1.71
Usp40Q8BWR4 Gm23137-201ENSMUST00000157559 107 ntBASIC4.37□□□□□ -1.71
Usp40Q8BWR4 Gm23474-201ENSMUST00000158884 75 ntBASIC4.37□□□□□ -1.71
Usp40Q8BWR4 Gm17119-201ENSMUST00000163943 280 ntBASIC4.37□□□□□ -1.71
Usp40Q8BWR4 Gm25211-201ENSMUST00000177553 107 ntBASIC4.37□□□□□ -1.71
Usp40Q8BWR4 Gm24540-201ENSMUST00000177627 107 ntBASIC4.37□□□□□ -1.71
Usp40Q8BWR4 Gm25256-201ENSMUST00000177746 107 ntBASIC4.37□□□□□ -1.71
Usp40Q8BWR4 Gm22822-201ENSMUST00000177941 107 ntBASIC4.37□□□□□ -1.71
Usp40Q8BWR4 Rnu6-201ENSMUST00000178023 107 ntBASIC4.37□□□□□ -1.71
Usp40Q8BWR4 Gm25245-201ENSMUST00000178139 107 ntBASIC4.37□□□□□ -1.71
Usp40Q8BWR4 Gm24753-201ENSMUST00000178183 107 ntBASIC4.37□□□□□ -1.71
Usp40Q8BWR4 Gm25829-201ENSMUST00000178275 107 ntBASIC4.37□□□□□ -1.71
Usp40Q8BWR4 Gm22092-201ENSMUST00000178290 107 ntBASIC4.37□□□□□ -1.71
Usp40Q8BWR4 Gm24486-201ENSMUST00000178420 107 ntBASIC4.37□□□□□ -1.71
Usp40Q8BWR4 Gm23217-201ENSMUST00000178482 107 ntBASIC4.37□□□□□ -1.71
Usp40Q8BWR4 Gm26245-201ENSMUST00000178491 107 ntBASIC4.37□□□□□ -1.71
Usp40Q8BWR4 Gm24019-201ENSMUST00000178620 107 ntBASIC4.37□□□□□ -1.71
Usp40Q8BWR4 Gm23610-201ENSMUST00000178659 107 ntBASIC4.37□□□□□ -1.71
Usp40Q8BWR4 Gm23092-201ENSMUST00000178688 107 ntBASIC4.37□□□□□ -1.71
Usp40Q8BWR4 Gm25709-201ENSMUST00000178844 107 ntBASIC4.37□□□□□ -1.71
Usp40Q8BWR4 Gm25547-201ENSMUST00000178877 107 ntBASIC4.37□□□□□ -1.71
Usp40Q8BWR4 Gm25312-201ENSMUST00000178972 107 ntBASIC4.37□□□□□ -1.71
Usp40Q8BWR4 Gm24722-201ENSMUST00000179017 107 ntBASIC4.37□□□□□ -1.71
Usp40Q8BWR4 Gm22969-201ENSMUST00000179018 107 ntBASIC4.37□□□□□ -1.71
Usp40Q8BWR4 Gm25101-201ENSMUST00000179057 107 ntBASIC4.37□□□□□ -1.71
Usp40Q8BWR4 Gm26378-201ENSMUST00000179093 107 ntBASIC4.37□□□□□ -1.71
Usp40Q8BWR4 Gm24873-201ENSMUST00000179101 107 ntBASIC4.37□□□□□ -1.71
Usp40Q8BWR4 Gm23934-201ENSMUST00000179111 107 ntBASIC4.37□□□□□ -1.71
Usp40Q8BWR4 Gm22623-201ENSMUST00000179244 107 ntBASIC4.37□□□□□ -1.71
Usp40Q8BWR4 Gm26243-201ENSMUST00000179260 107 ntBASIC4.37□□□□□ -1.71
Usp40Q8BWR4 Gm25737-201ENSMUST00000179274 107 ntBASIC4.37□□□□□ -1.71
Usp40Q8BWR4 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Usp40Q8BWR4 Gm22618-201ENSMUST00000179376 107 ntBASIC4.37□□□□□ -1.71
Usp40Q8BWR4 Gm24182-201ENSMUST00000179419 107 ntBASIC4.37□□□□□ -1.71
Usp40Q8BWR4 Gm24242-201ENSMUST00000179440 107 ntBASIC4.37□□□□□ -1.71
Usp40Q8BWR4 Gm26297-201ENSMUST00000179464 132 ntBASIC4.37□□□□□ -1.71
Usp40Q8BWR4 Gm25064-201ENSMUST00000179535 107 ntBASIC4.37□□□□□ -1.71
Usp40Q8BWR4 Gm26295-201ENSMUST00000179690 107 ntBASIC4.37□□□□□ -1.71
Usp40Q8BWR4 Gm23712-201ENSMUST00000179713 107 ntBASIC4.37□□□□□ -1.71
Usp40Q8BWR4 Gm22823-201ENSMUST00000179754 107 ntBASIC4.37□□□□□ -1.71
Usp40Q8BWR4 Gm22360-201ENSMUST00000179775 107 ntBASIC4.37□□□□□ -1.71
Usp40Q8BWR4 Gm24978-201ENSMUST00000179782 107 ntBASIC4.37□□□□□ -1.71
Usp40Q8BWR4 Gm24967-201ENSMUST00000179791 107 ntBASIC4.37□□□□□ -1.71
Usp40Q8BWR4 Gm25173-201ENSMUST00000179794 107 ntBASIC4.37□□□□□ -1.71
Usp40Q8BWR4 Gm24870-201ENSMUST00000179897 107 ntBASIC4.37□□□□□ -1.71
Usp40Q8BWR4 Gm22288-201ENSMUST00000179904 107 ntBASIC4.37□□□□□ -1.71
Usp40Q8BWR4 Gm22645-201ENSMUST00000180010 107 ntBASIC4.37□□□□□ -1.71
Usp40Q8BWR4 Gm24565-201ENSMUST00000180099 107 ntBASIC4.37□□□□□ -1.71
Usp40Q8BWR4 Gm23805-201ENSMUST00000180129 107 ntBASIC4.37□□□□□ -1.71
Usp40Q8BWR4 Gm23512-201ENSMUST00000180237 107 ntBASIC4.37□□□□□ -1.71
Usp40Q8BWR4 Gm25327-201ENSMUST00000180263 107 ntBASIC4.37□□□□□ -1.71
Usp40Q8BWR4 Gm26058-201ENSMUST00000180294 107 ntBASIC4.37□□□□□ -1.71
Usp40Q8BWR4 Gm22418-201ENSMUST00000180326 107 ntBASIC4.37□□□□□ -1.71
Usp40Q8BWR4 Gm27233-201ENSMUST00000184030 307 ntBASIC4.37□□□□□ -1.71
Usp40Q8BWR4 Gm37997-201ENSMUST00000193515 267 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms