Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Prpf40bQ80W14 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Prpf40bQ80W14 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Prpf40bQ80W14 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Prpf40bQ80W14 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Prpf40bQ80W14 Gm26273-201ENSMUST00000104180 131 ntBASIC4.32□□□□□ -1.72
Prpf40bQ80W14 Gm22348-201ENSMUST00000178674 79 ntBASIC4.32□□□□□ -1.72
Prpf40bQ80W14 Mir7k-201ENSMUST00000184115 110 ntBASIC4.32□□□□□ -1.72
Prpf40bQ80W14 Igkv9-128-201ENSMUST00000196602 353 ntBASIC4.32□□□□□ -1.72
Prpf40bQ80W14 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Prpf40bQ80W14 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Prpf40bQ80W14 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Prpf40bQ80W14 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Prpf40bQ80W14 Gm42993-201ENSMUST00000196856 7325 ntBASIC4.32□□□□□ -1.72
Prpf40bQ80W14 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Prpf40bQ80W14 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
Prpf40bQ80W14 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Prpf40bQ80W14 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC4.31□□□□□ -1.72
Prpf40bQ80W14 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Prpf40bQ80W14 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Prpf40bQ80W14 Mir541-201ENSMUST00000102097 90 ntBASIC4.31□□□□□ -1.72
Prpf40bQ80W14 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC4.31□□□□□ -1.72
Prpf40bQ80W14 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Prpf40bQ80W14 Gm14838-201ENSMUST00000118913 248 ntBASIC4.31□□□□□ -1.72
Prpf40bQ80W14 Gm13541-201ENSMUST00000119519 283 ntBASIC4.31□□□□□ -1.72
Prpf40bQ80W14 Gm13729-201ENSMUST00000120328 406 ntBASIC4.31□□□□□ -1.72
Prpf40bQ80W14 Gm8244-201ENSMUST00000121254 264 ntBASIC4.31□□□□□ -1.72
Prpf40bQ80W14 n-R5s179-201ENSMUST00000122564 118 ntBASIC4.31□□□□□ -1.72
Prpf40bQ80W14 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Prpf40bQ80W14 Gm23957-201ENSMUST00000157209 90 ntBASIC4.31□□□□□ -1.72
Prpf40bQ80W14 Gm24138-201ENSMUST00000157572 114 ntBASIC4.31□□□□□ -1.72
Prpf40bQ80W14 Gm23198-201ENSMUST00000158811 91 ntBASIC4.31□□□□□ -1.72
Prpf40bQ80W14 Gm26287-201ENSMUST00000158887 81 ntBASIC4.31□□□□□ -1.72
Prpf40bQ80W14 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Prpf40bQ80W14 Gm22118-201ENSMUST00000175593 171 ntBASIC4.31□□□□□ -1.72
Prpf40bQ80W14 Gm7329-201ENSMUST00000185915 210 ntBASIC4.31□□□□□ -1.72
Prpf40bQ80W14 Gm29104-201ENSMUST00000186304 222 ntBASIC4.31□□□□□ -1.72
Prpf40bQ80W14 Gm37417-201ENSMUST00000195257 454 ntBASIC4.31□□□□□ -1.72
Prpf40bQ80W14 Mir7682-201ENSMUST00000198467 58 ntBASIC4.31□□□□□ -1.72
Prpf40bQ80W14 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Prpf40bQ80W14 AC140785.1-201ENSMUST00000217782 383 ntBASIC4.31□□□□□ -1.72
Prpf40bQ80W14 AC154262.1-201ENSMUST00000225976 286 ntBASIC4.31□□□□□ -1.72
Prpf40bQ80W14 Gm10161-201ENSMUST00000091506 204 ntBASIC4.31□□□□□ -1.72
Prpf40bQ80W14 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
Prpf40bQ80W14 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
Prpf40bQ80W14 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC4.31□□□□□ -1.72
Prpf40bQ80W14 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Prpf40bQ80W14 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Prpf40bQ80W14 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Prpf40bQ80W14 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Prpf40bQ80W14 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Prpf40bQ80W14 Gm23609-201ENSMUST00000104542 127 ntBASIC4.3□□□□□ -1.72
Prpf40bQ80W14 Gm15896-201ENSMUST00000118045 440 ntBASIC4.3□□□□□ -1.72
Prpf40bQ80W14 Gm11566-201ENSMUST00000118550 203 ntBASIC4.3□□□□□ -1.72
Prpf40bQ80W14 Gm13831-201ENSMUST00000118764 302 ntBASIC4.3□□□□□ -1.72
Prpf40bQ80W14 Gm11819-201ENSMUST00000122192 372 ntBASIC4.3□□□□□ -1.72
Prpf40bQ80W14 Gm22984-201ENSMUST00000122751 122 ntBASIC4.3□□□□□ -1.72
Prpf40bQ80W14 Gm22310-201ENSMUST00000157509 116 ntBASIC4.3□□□□□ -1.72
Prpf40bQ80W14 Gm29657-201ENSMUST00000189807 342 ntBASIC4.3□□□□□ -1.72
Prpf40bQ80W14 AC138401.2-201ENSMUST00000220461 365 ntBASIC4.3□□□□□ -1.72
Prpf40bQ80W14 AC159885.1-201ENSMUST00000222221 199 ntBASIC4.3□□□□□ -1.72
Prpf40bQ80W14 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Prpf40bQ80W14 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Prpf40bQ80W14 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Prpf40bQ80W14 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Prpf40bQ80W14 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Prpf40bQ80W14 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Prpf40bQ80W14 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Prpf40bQ80W14 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Prpf40bQ80W14 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Prpf40bQ80W14 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
Prpf40bQ80W14 Gm12902-201ENSMUST00000118389 322 ntBASIC4.29□□□□□ -1.72
Prpf40bQ80W14 Gm11704-201ENSMUST00000120031 214 ntBASIC4.29□□□□□ -1.72
Prpf40bQ80W14 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC4.29□□□□□ -1.72
Prpf40bQ80W14 Gm23602-201ENSMUST00000157258 132 ntBASIC4.29□□□□□ -1.72
Prpf40bQ80W14 Gm22145-201ENSMUST00000157396 148 ntBASIC4.29□□□□□ -1.72
Prpf40bQ80W14 Gm26028-201ENSMUST00000158660 294 ntBASIC4.29□□□□□ -1.72
Prpf40bQ80W14 Gm19123-201ENSMUST00000190716 651 ntBASIC4.29□□□□□ -1.72
Prpf40bQ80W14 Gm37361-201ENSMUST00000194345 132 ntBASIC4.29□□□□□ -1.72
Prpf40bQ80W14 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Prpf40bQ80W14 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Prpf40bQ80W14 Gm22062-201ENSMUST00000082563 107 ntBASIC4.29□□□□□ -1.72
Prpf40bQ80W14 Mir133a-1-201ENSMUST00000083465 68 ntBASIC4.29□□□□□ -1.72
Prpf40bQ80W14 Gm25896-201ENSMUST00000083713 136 ntBASIC4.29□□□□□ -1.72
Prpf40bQ80W14 Gm10033-201ENSMUST00000072427 1813 ntBASIC4.29□□□□□ -1.72
Prpf40bQ80W14 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Prpf40bQ80W14 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Prpf40bQ80W14 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC4.29□□□□□ -1.72
Prpf40bQ80W14 Gm18609-201ENSMUST00000203370 3601 ntBASIC4.29□□□□□ -1.72
Prpf40bQ80W14 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
Prpf40bQ80W14 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Prpf40bQ80W14 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
Prpf40bQ80W14 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Prpf40bQ80W14 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC4.28□□□□□ -1.72
Prpf40bQ80W14 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Prpf40bQ80W14 Gm37742-201ENSMUST00000193263 3979 ntBASIC4.28□□□□□ -1.72
Prpf40bQ80W14 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Prpf40bQ80W14 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Prpf40bQ80W14 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Prpf40bQ80W14 Gm13714-201ENSMUST00000117313 221 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 121.7 ms