Protein–RNA interactions for Protein: Q6H1V1

Best3, Bestrophin-3, mousemouse

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best3Q6H1V1 Gm44473-201ENSMUST00000204039 152 ntBASIC4.26□□□□□ -1.73
Best3Q6H1V1 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC4.26□□□□□ -1.73
Best3Q6H1V1 Gm46138-201ENSMUST00000215294 426 ntBASIC4.26□□□□□ -1.73
Best3Q6H1V1 AC123533.1-201ENSMUST00000227782 446 ntBASIC4.26□□□□□ -1.73
Best3Q6H1V1 Gm26497-201ENSMUST00000083146 107 ntBASIC4.26□□□□□ -1.73
Best3Q6H1V1 Mir28a-201ENSMUST00000083560 86 ntBASIC4.26□□□□□ -1.73
Best3Q6H1V1 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Best3Q6H1V1 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Best3Q6H1V1 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Best3Q6H1V1 Gm45461-201ENSMUST00000211726 4535 ntBASIC4.25□□□□□ -1.73
Best3Q6H1V1 Gm10484-201ENSMUST00000196372 4759 ntBASIC4.25□□□□□ -1.73
Best3Q6H1V1 Gm24282-201ENSMUST00000104232 66 ntBASIC4.25□□□□□ -1.73
Best3Q6H1V1 Gm14816-201ENSMUST00000117174 294 ntBASIC4.25□□□□□ -1.73
Best3Q6H1V1 Gm22956-201ENSMUST00000122520 80 ntBASIC4.25□□□□□ -1.73
Best3Q6H1V1 Gm26020-201ENSMUST00000122729 183 ntBASIC4.25□□□□□ -1.73
Best3Q6H1V1 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC4.25□□□□□ -1.73
Best3Q6H1V1 Gm22108-201ENSMUST00000177961 106 ntBASIC4.25□□□□□ -1.73
Best3Q6H1V1 Gm4479-201ENSMUST00000178807 171 ntBASIC4.25□□□□□ -1.73
Best3Q6H1V1 Gm24798-201ENSMUST00000179334 106 ntBASIC4.25□□□□□ -1.73
Best3Q6H1V1 Gm27747-201ENSMUST00000184707 85 ntBASIC4.25□□□□□ -1.73
Best3Q6H1V1 Gm28257-201ENSMUST00000185244 463 ntBASIC4.25□□□□□ -1.73
Best3Q6H1V1 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Best3Q6H1V1 Gm2719-201ENSMUST00000191929 444 ntBASIC4.25□□□□□ -1.73
Best3Q6H1V1 Igkv15-102-201ENSMUST00000197885 287 ntBASIC4.25□□□□□ -1.73
Best3Q6H1V1 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC4.25□□□□□ -1.73
Best3Q6H1V1 AC155923.1-201ENSMUST00000215676 356 ntBASIC4.25□□□□□ -1.73
Best3Q6H1V1 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Best3Q6H1V1 Gm10298-201ENSMUST00000074801 265 ntBASIC4.25□□□□□ -1.73
Best3Q6H1V1 Gm24316-201ENSMUST00000083041 107 ntBASIC4.25□□□□□ -1.73
Best3Q6H1V1 AF357428-201ENSMUST00000083815 69 ntBASIC4.25□□□□□ -1.73
Best3Q6H1V1 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Best3Q6H1V1 Gm15102-201ENSMUST00000118740 1502 ntBASIC4.25□□□□□ -1.73
Best3Q6H1V1 Gm42993-201ENSMUST00000196856 7325 ntBASIC4.25□□□□□ -1.73
Best3Q6H1V1 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Best3Q6H1V1 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Best3Q6H1V1 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
Best3Q6H1V1 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Best3Q6H1V1 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Best3Q6H1V1 Gm42888-201ENSMUST00000202425 4361 ntBASIC4.24□□□□□ -1.73
Best3Q6H1V1 Gm26100-201ENSMUST00000157245 127 ntBASIC4.24□□□□□ -1.73
Best3Q6H1V1 Gm26028-201ENSMUST00000158660 294 ntBASIC4.24□□□□□ -1.73
Best3Q6H1V1 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC4.24□□□□□ -1.73
Best3Q6H1V1 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC4.24□□□□□ -1.73
Best3Q6H1V1 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Best3Q6H1V1 Gm44600-201ENSMUST00000208540 111 ntBASIC4.24□□□□□ -1.73
Best3Q6H1V1 AC105958.2-201ENSMUST00000214167 191 ntBASIC4.24□□□□□ -1.73
Best3Q6H1V1 AC165106.2-201ENSMUST00000226749 97 ntBASIC4.24□□□□□ -1.73
Best3Q6H1V1 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC4.24□□□□□ -1.73
Best3Q6H1V1 Gm23723-201ENSMUST00000082996 132 ntBASIC4.24□□□□□ -1.73
Best3Q6H1V1 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC4.24□□□□□ -1.73
Best3Q6H1V1 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Best3Q6H1V1 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
Best3Q6H1V1 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Best3Q6H1V1 Olfr112-201ENSMUST00000085548 3103 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Best3Q6H1V1 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Best3Q6H1V1 Gm23697-201ENSMUST00000103897 110 ntBASIC4.23□□□□□ -1.73
Best3Q6H1V1 Gm15377-201ENSMUST00000119594 246 ntBASIC4.23□□□□□ -1.73
Best3Q6H1V1 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC4.23□□□□□ -1.73
Best3Q6H1V1 Gm22447-201ENSMUST00000158155 92 ntBASIC4.23□□□□□ -1.73
Best3Q6H1V1 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Best3Q6H1V1 Gm23152-201ENSMUST00000175322 116 ntBASIC4.23□□□□□ -1.73
Best3Q6H1V1 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC4.23□□□□□ -1.73
Best3Q6H1V1 Gm27374-201ENSMUST00000183660 81 ntBASIC4.23□□□□□ -1.73
Best3Q6H1V1 Gm18357-201ENSMUST00000188184 580 ntBASIC4.23□□□□□ -1.73
Best3Q6H1V1 Gm28924-201ENSMUST00000190012 241 ntBASIC4.23□□□□□ -1.73
Best3Q6H1V1 Gm36946-201ENSMUST00000192706 435 ntBASIC4.23□□□□□ -1.73
Best3Q6H1V1 Gm44337-201ENSMUST00000196553 114 ntBASIC4.23□□□□□ -1.73
Best3Q6H1V1 Gm23370-202ENSMUST00000197008 129 ntBASIC4.23□□□□□ -1.73
Best3Q6H1V1 Gm2829-201ENSMUST00000213121 499 ntBASIC4.23□□□□□ -1.73
Best3Q6H1V1 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC4.23□□□□□ -1.73
Best3Q6H1V1 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Best3Q6H1V1 Gm23727-201ENSMUST00000083352 164 ntBASIC4.23□□□□□ -1.73
Best3Q6H1V1 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Best3Q6H1V1 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Best3Q6H1V1 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
Best3Q6H1V1 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Best3Q6H1V1 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Best3Q6H1V1 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Best3Q6H1V1 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Best3Q6H1V1 Gm42481-201ENSMUST00000196822 2178 ntBASIC4.22□□□□□ -1.73
Best3Q6H1V1 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC4.22□□□□□ -1.73
Best3Q6H1V1 Gm26145-201ENSMUST00000104476 127 ntBASIC4.22□□□□□ -1.73
Best3Q6H1V1 Gm15526-201ENSMUST00000112504 204 ntBASIC4.22□□□□□ -1.73
Best3Q6H1V1 Gm12793-201ENSMUST00000119268 292 ntBASIC4.22□□□□□ -1.73
Best3Q6H1V1 Gm23232-201ENSMUST00000157300 105 ntBASIC4.22□□□□□ -1.73
Best3Q6H1V1 Gm23331-201ENSMUST00000157423 108 ntBASIC4.22□□□□□ -1.73
Best3Q6H1V1 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC4.22□□□□□ -1.73
Best3Q6H1V1 Mir7661-201ENSMUST00000197023 61 ntBASIC4.22□□□□□ -1.73
Best3Q6H1V1 Gm9377-201ENSMUST00000207227 623 ntBASIC4.22□□□□□ -1.73
Best3Q6H1V1 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC4.22□□□□□ -1.73
Best3Q6H1V1 AC158606.1-201ENSMUST00000220078 325 ntBASIC4.22□□□□□ -1.73
Best3Q6H1V1 Rny1-201ENSMUST00000083767 112 ntBASIC4.22□□□□□ -1.73
Best3Q6H1V1 Gm42447-201ENSMUST00000200102 2903 ntBASIC4.22□□□□□ -1.73
Best3Q6H1V1 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Best3Q6H1V1 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC4.22□□□□□ -1.73
Best3Q6H1V1 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
Best3Q6H1V1 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Best3Q6H1V1 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
Best3Q6H1V1 Gm7853-201ENSMUST00000100708 478 ntBASIC4.21□□□□□ -1.74
Best3Q6H1V1 Gm24909-201ENSMUST00000157290 280 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms