Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm23702-201ENSMUST00000158840 130 ntBASIC4.01□□□□□ -1.77
Sh3rf1Q69ZI1 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC4.01□□□□□ -1.77
Sh3rf1Q69ZI1 Gm24308-201ENSMUST00000177773 114 ntBASIC4.01□□□□□ -1.77
Sh3rf1Q69ZI1 Gm24799-201ENSMUST00000178431 79 ntBASIC4.01□□□□□ -1.77
Sh3rf1Q69ZI1 Gm25935-201ENSMUST00000178746 107 ntBASIC4.01□□□□□ -1.77
Sh3rf1Q69ZI1 Gm27899-201ENSMUST00000184715 64 ntBASIC4.01□□□□□ -1.77
Sh3rf1Q69ZI1 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC4.01□□□□□ -1.77
Sh3rf1Q69ZI1 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC4.01□□□□□ -1.77
Sh3rf1Q69ZI1 Gm45420-201ENSMUST00000211243 425 ntBASIC4.01□□□□□ -1.77
Sh3rf1Q69ZI1 Gm5358-201ENSMUST00000212814 353 ntBASIC4.01□□□□□ -1.77
Sh3rf1Q69ZI1 AC173345.2-201ENSMUST00000222795 153 ntBASIC4.01□□□□□ -1.77
Sh3rf1Q69ZI1 AC183092.1-201ENSMUST00000224301 153 ntBASIC4.01□□□□□ -1.77
Sh3rf1Q69ZI1 Gm23722-201ENSMUST00000083002 130 ntBASIC4.01□□□□□ -1.77
Sh3rf1Q69ZI1 Mir133a-2-201ENSMUST00000083526 104 ntBASIC4.01□□□□□ -1.77
Sh3rf1Q69ZI1 Gm22868-201ENSMUST00000083955 164 ntBASIC4.01□□□□□ -1.77
Sh3rf1Q69ZI1 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC4.01□□□□□ -1.77
Sh3rf1Q69ZI1 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Sh3rf1Q69ZI1 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Sh3rf1Q69ZI1 AC124346.2-201ENSMUST00000217986 5083 ntBASIC4.01□□□□□ -1.77
Sh3rf1Q69ZI1 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Sh3rf1Q69ZI1 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Sh3rf1Q69ZI1 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Sh3rf1Q69ZI1 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Sh3rf1Q69ZI1 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC4□□□□□ -1.77
Sh3rf1Q69ZI1 Olfr694-204ENSMUST00000216895 4853 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Sh3rf1Q69ZI1 Mir466b-3-201ENSMUST00000103806 81 ntBASIC4□□□□□ -1.77
Sh3rf1Q69ZI1 Gm25169-201ENSMUST00000104190 129 ntBASIC4□□□□□ -1.77
Sh3rf1Q69ZI1 Gm8666-201ENSMUST00000117517 292 ntBASIC4□□□□□ -1.77
Sh3rf1Q69ZI1 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC4□□□□□ -1.77
Sh3rf1Q69ZI1 Gm12252-201ENSMUST00000119517 219 ntBASIC4□□□□□ -1.77
Sh3rf1Q69ZI1 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC4□□□□□ -1.77
Sh3rf1Q69ZI1 Gm23753-201ENSMUST00000157575 149 ntBASIC4□□□□□ -1.77
Sh3rf1Q69ZI1 Mir6345-201ENSMUST00000184286 128 ntBASIC4□□□□□ -1.77
Sh3rf1Q69ZI1 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC4□□□□□ -1.77
Sh3rf1Q69ZI1 Gm38088-201ENSMUST00000195829 241 ntBASIC4□□□□□ -1.77
Sh3rf1Q69ZI1 Gm43853-201ENSMUST00000197162 301 ntBASIC4□□□□□ -1.77
Sh3rf1Q69ZI1 Gm36259-201ENSMUST00000197340 392 ntBASIC4□□□□□ -1.77
Sh3rf1Q69ZI1 AC138401.2-201ENSMUST00000220461 365 ntBASIC4□□□□□ -1.77
Sh3rf1Q69ZI1 Mir21a-201ENSMUST00000083521 92 ntBASIC4□□□□□ -1.77
Sh3rf1Q69ZI1 Mir384-201ENSMUST00000083565 88 ntBASIC4□□□□□ -1.77
Sh3rf1Q69ZI1 Gm23042-201ENSMUST00000083866 101 ntBASIC4□□□□□ -1.77
Sh3rf1Q69ZI1 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Sh3rf1Q69ZI1 Gm37848-201ENSMUST00000195288 3103 ntBASIC4□□□□□ -1.77
Sh3rf1Q69ZI1 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
Sh3rf1Q69ZI1 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Sh3rf1Q69ZI1 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Sh3rf1Q69ZI1 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Sh3rf1Q69ZI1 Gm13868-201ENSMUST00000122411 294 ntBASIC3.99□□□□□ -1.77
Sh3rf1Q69ZI1 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC3.99□□□□□ -1.77
Sh3rf1Q69ZI1 Gm22314-201ENSMUST00000158007 281 ntBASIC3.99□□□□□ -1.77
Sh3rf1Q69ZI1 Gm24552-201ENSMUST00000158646 103 ntBASIC3.99□□□□□ -1.77
Sh3rf1Q69ZI1 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC3.99□□□□□ -1.77
Sh3rf1Q69ZI1 Gm22699-201ENSMUST00000175376 105 ntBASIC3.99□□□□□ -1.77
Sh3rf1Q69ZI1 Mir7047-201ENSMUST00000184595 64 ntBASIC3.99□□□□□ -1.77
Sh3rf1Q69ZI1 Gm28267-201ENSMUST00000191093 265 ntBASIC3.99□□□□□ -1.77
Sh3rf1Q69ZI1 Mir7682-201ENSMUST00000198467 58 ntBASIC3.99□□□□□ -1.77
Sh3rf1Q69ZI1 Gm8820-201ENSMUST00000204077 571 ntBASIC3.99□□□□□ -1.77
Sh3rf1Q69ZI1 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC3.99□□□□□ -1.77
Sh3rf1Q69ZI1 Gm45553-201ENSMUST00000209929 507 ntBASIC3.99□□□□□ -1.77
Sh3rf1Q69ZI1 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Sh3rf1Q69ZI1 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Sh3rf1Q69ZI1 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
Sh3rf1Q69ZI1 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Sh3rf1Q69ZI1 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Sh3rf1Q69ZI1 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Sh3rf1Q69ZI1 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Sh3rf1Q69ZI1 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Sh3rf1Q69ZI1 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Sh3rf1Q69ZI1 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Sh3rf1Q69ZI1 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC3.98□□□□□ -1.77
Sh3rf1Q69ZI1 Gm13992-201ENSMUST00000120558 156 ntBASIC3.98□□□□□ -1.77
Sh3rf1Q69ZI1 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC3.98□□□□□ -1.77
Sh3rf1Q69ZI1 Gm26275-201ENSMUST00000157101 268 ntBASIC3.98□□□□□ -1.77
Sh3rf1Q69ZI1 Gm24505-201ENSMUST00000157682 126 ntBASIC3.98□□□□□ -1.77
Sh3rf1Q69ZI1 Gm25494-201ENSMUST00000158143 100 ntBASIC3.98□□□□□ -1.77
Sh3rf1Q69ZI1 Gm17186-201ENSMUST00000171742 456 ntBASIC3.98□□□□□ -1.77
Sh3rf1Q69ZI1 Gm23415-201ENSMUST00000175519 83 ntBASIC3.98□□□□□ -1.77
Sh3rf1Q69ZI1 Gm26097-201ENSMUST00000179642 93 ntBASIC3.98□□□□□ -1.77
Sh3rf1Q69ZI1 Gm27761-201ENSMUST00000184091 131 ntBASIC3.98□□□□□ -1.77
Sh3rf1Q69ZI1 Gm28344-201ENSMUST00000185704 279 ntBASIC3.98□□□□□ -1.77
Sh3rf1Q69ZI1 Gm29574-201ENSMUST00000186226 696 ntBASIC3.98□□□□□ -1.77
Sh3rf1Q69ZI1 Gm44594-201ENSMUST00000208982 407 ntBASIC3.98□□□□□ -1.77
Sh3rf1Q69ZI1 CT010444.1-201ENSMUST00000219963 3845 ntBASIC3.98□□□□□ -1.77
Sh3rf1Q69ZI1 Gm9174-201ENSMUST00000078149 255 ntBASIC3.98□□□□□ -1.77
Sh3rf1Q69ZI1 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Sh3rf1Q69ZI1 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Sh3rf1Q69ZI1 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC3.98□□□□□ -1.77
Sh3rf1Q69ZI1 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
Sh3rf1Q69ZI1 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC3.97□□□□□ -1.77
Sh3rf1Q69ZI1 Gm37626-201ENSMUST00000194332 4563 ntBASIC3.97□□□□□ -1.77
Sh3rf1Q69ZI1 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
Sh3rf1Q69ZI1 Gm45264-201ENSMUST00000210090 3995 ntBASIC3.97□□□□□ -1.77
Sh3rf1Q69ZI1 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Sh3rf1Q69ZI1 Gm26075-201ENSMUST00000104062 121 ntBASIC3.97□□□□□ -1.77
Sh3rf1Q69ZI1 Gm24831-201ENSMUST00000116778 126 ntBASIC3.97□□□□□ -1.77
Sh3rf1Q69ZI1 Gm13314-201ENSMUST00000118742 335 ntBASIC3.97□□□□□ -1.77
Sh3rf1Q69ZI1 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC3.97□□□□□ -1.77
Sh3rf1Q69ZI1 Gm16327-201ENSMUST00000137146 228 ntBASIC3.97□□□□□ -1.77
Sh3rf1Q69ZI1 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC3.97□□□□□ -1.77
Sh3rf1Q69ZI1 Gm25967-201ENSMUST00000157168 147 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 101.7 ms