Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC3.95□□□□□ -1.78
Trim28Q62318 n-R5s50-201ENSMUST00000083168 111 ntBASIC3.95□□□□□ -1.78
Trim28Q62318 Gm23845-201ENSMUST00000083834 152 ntBASIC3.95□□□□□ -1.78
Trim28Q62318 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Trim28Q62318 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.95□□□□□ -1.78
Trim28Q62318 Gm43896-201ENSMUST00000203440 2032 ntBASIC3.94□□□□□ -1.78
Trim28Q62318 Mir881-201ENSMUST00000104844 78 ntBASIC3.94□□□□□ -1.78
Trim28Q62318 Gm13314-201ENSMUST00000118742 335 ntBASIC3.94□□□□□ -1.78
Trim28Q62318 Gm14841-201ENSMUST00000121067 758 ntBASIC3.94□□□□□ -1.78
Trim28Q62318 Gm16021-201ENSMUST00000121176 219 ntBASIC3.94□□□□□ -1.78
Trim28Q62318 Trav20-201ENSMUST00000142754 347 ntBASIC3.94□□□□□ -1.78
Trim28Q62318 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
Trim28Q62318 Mir6916-201ENSMUST00000184514 63 ntBASIC3.94□□□□□ -1.78
Trim28Q62318 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC3.94□□□□□ -1.78
Trim28Q62318 Gm33654-201ENSMUST00000221704 215 ntBASIC3.94□□□□□ -1.78
Trim28Q62318 AC124537.1-201ENSMUST00000222890 159 ntBASIC3.94□□□□□ -1.78
Trim28Q62318 LOC667541-201ENSMUST00000223408 278 ntBASIC3.94□□□□□ -1.78
Trim28Q62318 Gm10092-201ENSMUST00000077110 180 ntBASIC3.94□□□□□ -1.78
Trim28Q62318 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
Trim28Q62318 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Trim28Q62318 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC3.94□□□□□ -1.78
Trim28Q62318 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
Trim28Q62318 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC3.94□□□□□ -1.78
Trim28Q62318 AC137842.3-201ENSMUST00000228855 2397 ntBASIC3.94□□□□□ -1.78
Trim28Q62318 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Trim28Q62318 Gm24546-201ENSMUST00000158652 102 ntBASIC3.93□□□□□ -1.78
Trim28Q62318 Gm23152-201ENSMUST00000175322 116 ntBASIC3.93□□□□□ -1.78
Trim28Q62318 Gm21893-201ENSMUST00000179119 397 ntBASIC3.93□□□□□ -1.78
Trim28Q62318 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC3.93□□□□□ -1.78
Trim28Q62318 Gm37338-201ENSMUST00000191986 127 ntBASIC3.93□□□□□ -1.78
Trim28Q62318 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC3.93□□□□□ -1.78
Trim28Q62318 Gm8940-201ENSMUST00000212585 219 ntBASIC3.93□□□□□ -1.78
Trim28Q62318 AC163357.1-201ENSMUST00000220847 233 ntBASIC3.93□□□□□ -1.78
Trim28Q62318 AC129541.1-201ENSMUST00000226940 523 ntBASIC3.93□□□□□ -1.78
Trim28Q62318 Gm26454-201ENSMUST00000082682 107 ntBASIC3.93□□□□□ -1.78
Trim28Q62318 Gm22304-201ENSMUST00000082688 129 ntBASIC3.93□□□□□ -1.78
Trim28Q62318 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
Trim28Q62318 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Trim28Q62318 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Trim28Q62318 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Trim28Q62318 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
Trim28Q62318 Gm3584-201ENSMUST00000173822 2565 ntBASIC3.92□□□□□ -1.78
Trim28Q62318 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
Trim28Q62318 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Trim28Q62318 Gm2066-201ENSMUST00000118046 389 ntBASIC3.92□□□□□ -1.78
Trim28Q62318 Gm15807-201ENSMUST00000119880 1128 ntBASIC3.92□□□□□ -1.78
Trim28Q62318 Gm12956-201ENSMUST00000122184 414 ntBASIC3.92□□□□□ -1.78
Trim28Q62318 Gm22141-201ENSMUST00000157403 277 ntBASIC3.92□□□□□ -1.78
Trim28Q62318 Gm22769-201ENSMUST00000158367 98 ntBASIC3.92□□□□□ -1.78
Trim28Q62318 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Trim28Q62318 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC3.92□□□□□ -1.78
Trim28Q62318 Gm22108-201ENSMUST00000177961 106 ntBASIC3.92□□□□□ -1.78
Trim28Q62318 Gm24798-201ENSMUST00000179334 106 ntBASIC3.92□□□□□ -1.78
Trim28Q62318 Mir6336-201ENSMUST00000183581 130 ntBASIC3.92□□□□□ -1.78
Trim28Q62318 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC3.92□□□□□ -1.78
Trim28Q62318 AC152979.1-201ENSMUST00000218214 289 ntBASIC3.92□□□□□ -1.78
Trim28Q62318 AC153646.2-201ENSMUST00000220516 109 ntBASIC3.92□□□□□ -1.78
Trim28Q62318 AC147545.1-201ENSMUST00000227528 108 ntBASIC3.92□□□□□ -1.78
Trim28Q62318 Gm22744-201ENSMUST00000083444 65 ntBASIC3.92□□□□□ -1.78
Trim28Q62318 Gm24817-201ENSMUST00000093672 105 ntBASIC3.92□□□□□ -1.78
Trim28Q62318 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Trim28Q62318 Gm14880-201ENSMUST00000117581 292 ntBASIC3.91□□□□□ -1.78
Trim28Q62318 Gm25390-201ENSMUST00000157341 103 ntBASIC3.91□□□□□ -1.78
Trim28Q62318 Gm23120-201ENSMUST00000157654 287 ntBASIC3.91□□□□□ -1.78
Trim28Q62318 Gm26088-201ENSMUST00000157896 131 ntBASIC3.91□□□□□ -1.78
Trim28Q62318 Gm22891-201ENSMUST00000158641 164 ntBASIC3.91□□□□□ -1.78
Trim28Q62318 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC3.91□□□□□ -1.78
Trim28Q62318 Gm23725-201ENSMUST00000177876 107 ntBASIC3.91□□□□□ -1.78
Trim28Q62318 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Trim28Q62318 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
Trim28Q62318 Gm37817-201ENSMUST00000195276 434 ntBASIC3.91□□□□□ -1.78
Trim28Q62318 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC3.91□□□□□ -1.78
Trim28Q62318 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC3.91□□□□□ -1.78
Trim28Q62318 Gm45380-201ENSMUST00000210465 315 ntBASIC3.91□□□□□ -1.78
Trim28Q62318 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Trim28Q62318 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Trim28Q62318 AC140477.1-201ENSMUST00000222354 246 ntBASIC3.91□□□□□ -1.78
Trim28Q62318 Gm24045-201ENSMUST00000083113 98 ntBASIC3.91□□□□□ -1.78
Trim28Q62318 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Trim28Q62318 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Trim28Q62318 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
Trim28Q62318 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
Trim28Q62318 Mir499-201ENSMUST00000102357 79 ntBASIC3.9□□□□□ -1.79
Trim28Q62318 Gm25407-201ENSMUST00000104102 134 ntBASIC3.9□□□□□ -1.79
Trim28Q62318 Gm13329-201ENSMUST00000117063 265 ntBASIC3.9□□□□□ -1.79
Trim28Q62318 Gm15037-201ENSMUST00000120358 259 ntBASIC3.9□□□□□ -1.79
Trim28Q62318 Gm11849-201ENSMUST00000121293 261 ntBASIC3.9□□□□□ -1.79
Trim28Q62318 Gm12779-201ENSMUST00000121496 143 ntBASIC3.9□□□□□ -1.79
Trim28Q62318 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC3.9□□□□□ -1.79
Trim28Q62318 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC3.9□□□□□ -1.79
Trim28Q62318 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC3.9□□□□□ -1.79
Trim28Q62318 Gm23234-201ENSMUST00000157304 134 ntBASIC3.9□□□□□ -1.79
Trim28Q62318 Gm25666-201ENSMUST00000157702 107 ntBASIC3.9□□□□□ -1.79
Trim28Q62318 Gm17166-201ENSMUST00000172006 431 ntBASIC3.9□□□□□ -1.79
Trim28Q62318 Gm25360-201ENSMUST00000178786 191 ntBASIC3.9□□□□□ -1.79
Trim28Q62318 Gm24968-201ENSMUST00000179817 107 ntBASIC3.9□□□□□ -1.79
Trim28Q62318 Gm38076-201ENSMUST00000193889 450 ntBASIC3.9□□□□□ -1.79
Trim28Q62318 Gm38060-201ENSMUST00000194822 464 ntBASIC3.9□□□□□ -1.79
Trim28Q62318 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC3.9□□□□□ -1.79
Trim28Q62318 Gm44526-201ENSMUST00000204664 121 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms