Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
Trav3-3Q5R1C3 AC134917.1-201ENSMUST00000220517 1449 ntBASIC1.56□□□□□ -2.16
Trav3-3Q5R1C3 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Trav3-3Q5R1C3 Gm22831-201ENSMUST00000102473 109 ntBASIC1.55□□□□□ -2.16
Trav3-3Q5R1C3 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
Trav3-3Q5R1C3 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Trav3-3Q5R1C3 Gm12393-201ENSMUST00000117084 848 ntBASIC1.55□□□□□ -2.16
Trav3-3Q5R1C3 Gm12897-201ENSMUST00000120341 250 ntBASIC1.55□□□□□ -2.16
Trav3-3Q5R1C3 Gm14215-201ENSMUST00000120578 221 ntBASIC1.55□□□□□ -2.16
Trav3-3Q5R1C3 Gm14551-201ENSMUST00000120802 256 ntBASIC1.55□□□□□ -2.16
Trav3-3Q5R1C3 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC1.55□□□□□ -2.16
Trav3-3Q5R1C3 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
Trav3-3Q5R1C3 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC1.55□□□□□ -2.16
Trav3-3Q5R1C3 Gm22076-201ENSMUST00000158601 84 ntBASIC1.55□□□□□ -2.16
Trav3-3Q5R1C3 Gm24837-201ENSMUST00000158683 81 ntBASIC1.55□□□□□ -2.16
Trav3-3Q5R1C3 Mir3075-201ENSMUST00000175340 85 ntBASIC1.55□□□□□ -2.16
Trav3-3Q5R1C3 Gm25748-201ENSMUST00000175487 70 ntBASIC1.55□□□□□ -2.16
Trav3-3Q5R1C3 Gm25020-201ENSMUST00000178071 107 ntBASIC1.55□□□□□ -2.16
Trav3-3Q5R1C3 Gm9022-202ENSMUST00000183285 483 ntBASIC1.55□□□□□ -2.16
Trav3-3Q5R1C3 Mir7578-201ENSMUST00000183455 82 ntBASIC1.55□□□□□ -2.16
Trav3-3Q5R1C3 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC1.55□□□□□ -2.16
Trav3-3Q5R1C3 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC1.55□□□□□ -2.16
Trav3-3Q5R1C3 Gm44083-201ENSMUST00000203114 337 ntBASIC1.55□□□□□ -2.16
Trav3-3Q5R1C3 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Trav3-3Q5R1C3 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC1.55□□□□□ -2.16
Trav3-3Q5R1C3 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC1.55□□□□□ -2.16
Trav3-3Q5R1C3 Gm22620-201ENSMUST00000082700 133 ntBASIC1.55□□□□□ -2.16
Trav3-3Q5R1C3 Gm24045-201ENSMUST00000083113 98 ntBASIC1.55□□□□□ -2.16
Trav3-3Q5R1C3 Gm24412-201ENSMUST00000083426 109 ntBASIC1.55□□□□□ -2.16
Trav3-3Q5R1C3 Mir128-1-201ENSMUST00000083586 70 ntBASIC1.55□□□□□ -2.16
Trav3-3Q5R1C3 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
Trav3-3Q5R1C3 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Trav3-3Q5R1C3 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Trav3-3Q5R1C3 Gm42635-201ENSMUST00000200266 2571 ntBASIC1.54□□□□□ -2.16
Trav3-3Q5R1C3 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
Trav3-3Q5R1C3 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
Trav3-3Q5R1C3 Gm23803-201ENSMUST00000104610 132 ntBASIC1.54□□□□□ -2.16
Trav3-3Q5R1C3 Gm22843-201ENSMUST00000157710 134 ntBASIC1.54□□□□□ -2.16
Trav3-3Q5R1C3 Gm22668-201ENSMUST00000158716 260 ntBASIC1.54□□□□□ -2.16
Trav3-3Q5R1C3 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC1.54□□□□□ -2.16
Trav3-3Q5R1C3 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
Trav3-3Q5R1C3 Gm21978-201ENSMUST00000179696 377 ntBASIC1.54□□□□□ -2.16
Trav3-3Q5R1C3 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
Trav3-3Q5R1C3 Gm27532-201ENSMUST00000183726 113 ntBASIC1.54□□□□□ -2.16
Trav3-3Q5R1C3 Mir7658-201ENSMUST00000184043 57 ntBASIC1.54□□□□□ -2.16
Trav3-3Q5R1C3 Gm43510-201ENSMUST00000197922 353 ntBASIC1.54□□□□□ -2.16
Trav3-3Q5R1C3 Gm45252-201ENSMUST00000211579 397 ntBASIC1.54□□□□□ -2.16
Trav3-3Q5R1C3 Gm45754-201ENSMUST00000212380 279 ntBASIC1.54□□□□□ -2.16
Trav3-3Q5R1C3 Gm18774-201ENSMUST00000218269 601 ntBASIC1.54□□□□□ -2.16
Trav3-3Q5R1C3 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC1.54□□□□□ -2.16
Trav3-3Q5R1C3 Gm24151-201ENSMUST00000082758 141 ntBASIC1.54□□□□□ -2.16
Trav3-3Q5R1C3 Gm25698-201ENSMUST00000082897 107 ntBASIC1.54□□□□□ -2.16
Trav3-3Q5R1C3 Mir463-201ENSMUST00000093570 75 ntBASIC1.54□□□□□ -2.16
Trav3-3Q5R1C3 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC1.54□□□□□ -2.16
Trav3-3Q5R1C3 AL645643.1-201ENSMUST00000222438 3897 ntBASIC1.54□□□□□ -2.16
Trav3-3Q5R1C3 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
Trav3-3Q5R1C3 Gm12598-201ENSMUST00000117333 830 ntBASIC1.53□□□□□ -2.16
Trav3-3Q5R1C3 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC1.53□□□□□ -2.16
Trav3-3Q5R1C3 Gm12793-201ENSMUST00000119268 292 ntBASIC1.53□□□□□ -2.16
Trav3-3Q5R1C3 Gm14638-201ENSMUST00000121338 216 ntBASIC1.53□□□□□ -2.16
Trav3-3Q5R1C3 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC1.53□□□□□ -2.16
Trav3-3Q5R1C3 Gm24937-201ENSMUST00000122597 134 ntBASIC1.53□□□□□ -2.16
Trav3-3Q5R1C3 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC1.53□□□□□ -2.16
Trav3-3Q5R1C3 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC1.53□□□□□ -2.16
Trav3-3Q5R1C3 Gm26102-201ENSMUST00000157251 284 ntBASIC1.53□□□□□ -2.16
Trav3-3Q5R1C3 Gm22603-201ENSMUST00000157603 96 ntBASIC1.53□□□□□ -2.16
Trav3-3Q5R1C3 Gm22538-201ENSMUST00000158169 299 ntBASIC1.53□□□□□ -2.16
Trav3-3Q5R1C3 Ear-ps4-201ENSMUST00000166834 450 ntBASIC1.53□□□□□ -2.16
Trav3-3Q5R1C3 Gm22192-201ENSMUST00000175128 85 ntBASIC1.53□□□□□ -2.16
Trav3-3Q5R1C3 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Trav3-3Q5R1C3 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Trav3-3Q5R1C3 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Trav3-3Q5R1C3 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Trav3-3Q5R1C3 Snord116l12-201ENSMUST00000179816 94 ntBASIC1.53□□□□□ -2.16
Trav3-3Q5R1C3 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Trav3-3Q5R1C3 Gm27511-201ENSMUST00000183502 127 ntBASIC1.53□□□□□ -2.16
Trav3-3Q5R1C3 Gm27878-201ENSMUST00000184000 106 ntBASIC1.53□□□□□ -2.16
Trav3-3Q5R1C3 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
Trav3-3Q5R1C3 Gm17771-201ENSMUST00000194477 1147 ntBASIC1.53□□□□□ -2.16
Trav3-3Q5R1C3 Gm37353-201ENSMUST00000194497 313 ntBASIC1.53□□□□□ -2.16
Trav3-3Q5R1C3 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC1.53□□□□□ -2.16
Trav3-3Q5R1C3 Mir6925-201ENSMUST00000197857 70 ntBASIC1.53□□□□□ -2.16
Trav3-3Q5R1C3 Gm45071-201ENSMUST00000205353 571 ntBASIC1.53□□□□□ -2.16
Trav3-3Q5R1C3 AC158598.1-201ENSMUST00000214349 3847 ntBASIC1.53□□□□□ -2.16
Trav3-3Q5R1C3 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC1.53□□□□□ -2.16
Trav3-3Q5R1C3 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC1.53□□□□□ -2.16
Trav3-3Q5R1C3 AC170810.3-201ENSMUST00000226177 374 ntBASIC1.53□□□□□ -2.16
Trav3-3Q5R1C3 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Trav3-3Q5R1C3 AC166344.2-201ENSMUST00000226747 374 ntBASIC1.53□□□□□ -2.16
Trav3-3Q5R1C3 AC120553.1-201ENSMUST00000227313 260 ntBASIC1.53□□□□□ -2.16
Trav3-3Q5R1C3 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Trav3-3Q5R1C3 Gm25632-201ENSMUST00000083112 85 ntBASIC1.53□□□□□ -2.16
Trav3-3Q5R1C3 Gm26265-201ENSMUST00000083277 135 ntBASIC1.53□□□□□ -2.16
Trav3-3Q5R1C3 Mir10a-201ENSMUST00000083585 110 ntBASIC1.53□□□□□ -2.16
Trav3-3Q5R1C3 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
Trav3-3Q5R1C3 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
Trav3-3Q5R1C3 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC1.52□□□□□ -2.17
Trav3-3Q5R1C3 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Trav3-3Q5R1C3 Gm42942-201ENSMUST00000196086 1328 ntBASIC1.52□□□□□ -2.17
Trav3-3Q5R1C3 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms