Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm25131-201ENSMUST00000082653 151 ntBASIC1.81□□□□□ -2.12
Upf3bQ3ULL6 Gm25788-201ENSMUST00000082721 131 ntBASIC1.81□□□□□ -2.12
Upf3bQ3ULL6 Gm22723-201ENSMUST00000083820 129 ntBASIC1.81□□□□□ -2.12
Upf3bQ3ULL6 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC1.81□□□□□ -2.12
Upf3bQ3ULL6 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC1.81□□□□□ -2.12
Upf3bQ3ULL6 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Upf3bQ3ULL6 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
Upf3bQ3ULL6 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Upf3bQ3ULL6 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Upf3bQ3ULL6 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.8□□□□□ -2.12
Upf3bQ3ULL6 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Upf3bQ3ULL6 Mdga2-203ENSMUST00000113942 423 ntBASIC1.8□□□□□ -2.12
Upf3bQ3ULL6 Gm23118-201ENSMUST00000122657 187 ntBASIC1.8□□□□□ -2.12
Upf3bQ3ULL6 Gm22073-201ENSMUST00000122668 189 ntBASIC1.8□□□□□ -2.12
Upf3bQ3ULL6 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC1.8□□□□□ -2.12
Upf3bQ3ULL6 Gm23078-201ENSMUST00000157848 148 ntBASIC1.8□□□□□ -2.12
Upf3bQ3ULL6 Gm24394-201ENSMUST00000158141 123 ntBASIC1.8□□□□□ -2.12
Upf3bQ3ULL6 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC1.8□□□□□ -2.12
Upf3bQ3ULL6 AC135292.1-201ENSMUST00000227665 204 ntBASIC1.8□□□□□ -2.12
Upf3bQ3ULL6 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Upf3bQ3ULL6 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Upf3bQ3ULL6 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Upf3bQ3ULL6 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Upf3bQ3ULL6 Gm19194-201ENSMUST00000192015 3774 ntBASIC1.79□□□□□ -2.12
Upf3bQ3ULL6 Gm24582-201ENSMUST00000103967 103 ntBASIC1.79□□□□□ -2.12
Upf3bQ3ULL6 Gm23951-201ENSMUST00000104029 132 ntBASIC1.79□□□□□ -2.12
Upf3bQ3ULL6 Gm13903-201ENSMUST00000120945 193 ntBASIC1.79□□□□□ -2.12
Upf3bQ3ULL6 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
Upf3bQ3ULL6 Gm22665-201ENSMUST00000158720 275 ntBASIC1.79□□□□□ -2.12
Upf3bQ3ULL6 Snord116l14-201ENSMUST00000179875 94 ntBASIC1.79□□□□□ -2.12
Upf3bQ3ULL6 Mir7017-201ENSMUST00000184894 62 ntBASIC1.79□□□□□ -2.12
Upf3bQ3ULL6 Gm38154-201ENSMUST00000195444 340 ntBASIC1.79□□□□□ -2.12
Upf3bQ3ULL6 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC1.79□□□□□ -2.12
Upf3bQ3ULL6 Gm45386-201ENSMUST00000210194 218 ntBASIC1.79□□□□□ -2.12
Upf3bQ3ULL6 Gm45240-201ENSMUST00000211437 674 ntBASIC1.79□□□□□ -2.12
Upf3bQ3ULL6 AC157017.1-201ENSMUST00000220148 364 ntBASIC1.79□□□□□ -2.12
Upf3bQ3ULL6 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
Upf3bQ3ULL6 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC1.79□□□□□ -2.12
Upf3bQ3ULL6 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
Upf3bQ3ULL6 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC1.79□□□□□ -2.12
Upf3bQ3ULL6 Gm37903-201ENSMUST00000192122 2381 ntBASIC1.79□□□□□ -2.12
Upf3bQ3ULL6 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC1.79□□□□□ -2.12
Upf3bQ3ULL6 Gm37602-201ENSMUST00000195187 3310 ntBASIC1.79□□□□□ -2.12
Upf3bQ3ULL6 AC162910.1-201ENSMUST00000221219 1723 ntBASIC1.78□□□□□ -2.12
Upf3bQ3ULL6 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
Upf3bQ3ULL6 Gm23744-201ENSMUST00000104231 149 ntBASIC1.78□□□□□ -2.12
Upf3bQ3ULL6 Gm14558-201ENSMUST00000117458 381 ntBASIC1.78□□□□□ -2.12
Upf3bQ3ULL6 Gm15175-201ENSMUST00000117629 132 ntBASIC1.78□□□□□ -2.12
Upf3bQ3ULL6 Gm13432-201ENSMUST00000118861 241 ntBASIC1.78□□□□□ -2.12
Upf3bQ3ULL6 Gm15061-201ENSMUST00000121076 1046 ntBASIC1.78□□□□□ -2.12
Upf3bQ3ULL6 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
Upf3bQ3ULL6 Mir1942-201ENSMUST00000157274 63 ntBASIC1.78□□□□□ -2.12
Upf3bQ3ULL6 Gm23713-201ENSMUST00000157353 70 ntBASIC1.78□□□□□ -2.12
Upf3bQ3ULL6 Gm22099-201ENSMUST00000157925 123 ntBASIC1.78□□□□□ -2.12
Upf3bQ3ULL6 Gm22615-201ENSMUST00000158102 70 ntBASIC1.78□□□□□ -2.12
Upf3bQ3ULL6 Gm22389-201ENSMUST00000158193 301 ntBASIC1.78□□□□□ -2.12
Upf3bQ3ULL6 Snord11-201ENSMUST00000158468 84 ntBASIC1.78□□□□□ -2.12
Upf3bQ3ULL6 Gm25711-201ENSMUST00000158633 128 ntBASIC1.78□□□□□ -2.12
Upf3bQ3ULL6 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
Upf3bQ3ULL6 Gm37579-201ENSMUST00000194291 142 ntBASIC1.78□□□□□ -2.12
Upf3bQ3ULL6 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.78□□□□□ -2.12
Upf3bQ3ULL6 Olfr1285-201ENSMUST00000208523 903 ntBASIC1.78□□□□□ -2.12
Upf3bQ3ULL6 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC1.78□□□□□ -2.12
Upf3bQ3ULL6 Gm23246-201ENSMUST00000083371 67 ntBASIC1.78□□□□□ -2.12
Upf3bQ3ULL6 Mir350-201ENSMUST00000083639 99 ntBASIC1.78□□□□□ -2.12
Upf3bQ3ULL6 Gm23010-201ENSMUST00000104151 126 ntBASIC1.77□□□□□ -2.13
Upf3bQ3ULL6 Gm7164-201ENSMUST00000117503 450 ntBASIC1.77□□□□□ -2.13
Upf3bQ3ULL6 Gm15211-201ENSMUST00000118932 528 ntBASIC1.77□□□□□ -2.13
Upf3bQ3ULL6 Gm6587-201ENSMUST00000120219 613 ntBASIC1.77□□□□□ -2.13
Upf3bQ3ULL6 Gm14428-201ENSMUST00000120408 822 ntBASIC1.77□□□□□ -2.13
Upf3bQ3ULL6 Gm26157-201ENSMUST00000158974 126 ntBASIC1.77□□□□□ -2.13
Upf3bQ3ULL6 Gm8114-201ENSMUST00000172225 484 ntBASIC1.77□□□□□ -2.13
Upf3bQ3ULL6 Gm42805-201ENSMUST00000196158 276 ntBASIC1.77□□□□□ -2.13
Upf3bQ3ULL6 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC1.77□□□□□ -2.13
Upf3bQ3ULL6 Gm9236-201ENSMUST00000196892 587 ntBASIC1.77□□□□□ -2.13
Upf3bQ3ULL6 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC1.77□□□□□ -2.13
Upf3bQ3ULL6 Gm44254-201ENSMUST00000204184 322 ntBASIC1.77□□□□□ -2.13
Upf3bQ3ULL6 Gm45296-201ENSMUST00000209625 205 ntBASIC1.77□□□□□ -2.13
Upf3bQ3ULL6 AC164629.1-201ENSMUST00000220250 1113 ntBASIC1.77□□□□□ -2.13
Upf3bQ3ULL6 AC165106.2-201ENSMUST00000226749 97 ntBASIC1.77□□□□□ -2.13
Upf3bQ3ULL6 Gm22810-201ENSMUST00000082741 158 ntBASIC1.77□□□□□ -2.13
Upf3bQ3ULL6 Gm23454-201ENSMUST00000083332 133 ntBASIC1.77□□□□□ -2.13
Upf3bQ3ULL6 Gm24412-201ENSMUST00000083426 109 ntBASIC1.77□□□□□ -2.13
Upf3bQ3ULL6 Mir107-201ENSMUST00000083660 87 ntBASIC1.77□□□□□ -2.13
Upf3bQ3ULL6 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
Upf3bQ3ULL6 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
Upf3bQ3ULL6 Gm42942-201ENSMUST00000196086 1328 ntBASIC1.76□□□□□ -2.13
Upf3bQ3ULL6 Gm26396-201ENSMUST00000104093 132 ntBASIC1.76□□□□□ -2.13
Upf3bQ3ULL6 Gm13439-201ENSMUST00000117541 409 ntBASIC1.76□□□□□ -2.13
Upf3bQ3ULL6 Gm15067-201ENSMUST00000119534 156 ntBASIC1.76□□□□□ -2.13
Upf3bQ3ULL6 Gm15281-201ENSMUST00000125181 351 ntBASIC1.76□□□□□ -2.13
Upf3bQ3ULL6 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC1.76□□□□□ -2.13
Upf3bQ3ULL6 Gm22603-201ENSMUST00000157603 96 ntBASIC1.76□□□□□ -2.13
Upf3bQ3ULL6 Gm17085-201ENSMUST00000165425 502 ntBASIC1.76□□□□□ -2.13
Upf3bQ3ULL6 Gm2930-201ENSMUST00000170403 474 ntBASIC1.76□□□□□ -2.13
Upf3bQ3ULL6 Gm18358-201ENSMUST00000173179 1277 ntBASIC1.76□□□□□ -2.13
Upf3bQ3ULL6 Gm24713-201ENSMUST00000178850 107 ntBASIC1.76□□□□□ -2.13
Upf3bQ3ULL6 Gm24464-201ENSMUST00000179697 107 ntBASIC1.76□□□□□ -2.13
Upf3bQ3ULL6 Gm25448-201ENSMUST00000180065 107 ntBASIC1.76□□□□□ -2.13
Upf3bQ3ULL6 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 139.7 ms