Protein–RNA interactions for Protein: Q3U4B1

Ssbp4, Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4Q3U4B1 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Ssbp4Q3U4B1 Gm24264-201ENSMUST00000179835 94 ntBASIC2.49□□□□□ -2.01
Ssbp4Q3U4B1 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Ssbp4Q3U4B1 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC2.49□□□□□ -2.01
Ssbp4Q3U4B1 Gm44063-201ENSMUST00000203307 376 ntBASIC2.49□□□□□ -2.01
Ssbp4Q3U4B1 Gm43955-201ENSMUST00000204332 142 ntBASIC2.49□□□□□ -2.01
Ssbp4Q3U4B1 Gm44858-201ENSMUST00000207360 154 ntBASIC2.49□□□□□ -2.01
Ssbp4Q3U4B1 AC124772.1-201ENSMUST00000221325 151 ntBASIC2.49□□□□□ -2.01
Ssbp4Q3U4B1 Gm24764-201ENSMUST00000083686 199 ntBASIC2.49□□□□□ -2.01
Ssbp4Q3U4B1 Gm25937-201ENSMUST00000083912 107 ntBASIC2.49□□□□□ -2.01
Ssbp4Q3U4B1 Gm25207-201ENSMUST00000093745 107 ntBASIC2.49□□□□□ -2.01
Ssbp4Q3U4B1 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
Ssbp4Q3U4B1 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Ssbp4Q3U4B1 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
Ssbp4Q3U4B1 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Ssbp4Q3U4B1 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Ssbp4Q3U4B1 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC2.49□□□□□ -2.01
Ssbp4Q3U4B1 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC2.49□□□□□ -2.01
Ssbp4Q3U4B1 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Ssbp4Q3U4B1 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Ssbp4Q3U4B1 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Ssbp4Q3U4B1 Gm11456-201ENSMUST00000121070 256 ntBASIC2.48□□□□□ -2.01
Ssbp4Q3U4B1 Gm8121-201ENSMUST00000153583 499 ntBASIC2.48□□□□□ -2.01
Ssbp4Q3U4B1 Gm23000-201ENSMUST00000157083 139 ntBASIC2.48□□□□□ -2.01
Ssbp4Q3U4B1 Gm26149-201ENSMUST00000157432 108 ntBASIC2.48□□□□□ -2.01
Ssbp4Q3U4B1 Gm22611-201ENSMUST00000158288 150 ntBASIC2.48□□□□□ -2.01
Ssbp4Q3U4B1 Gm22435-201ENSMUST00000158552 128 ntBASIC2.48□□□□□ -2.01
Ssbp4Q3U4B1 Gm16232-201ENSMUST00000162856 167 ntBASIC2.48□□□□□ -2.01
Ssbp4Q3U4B1 Gm27527-201ENSMUST00000183903 99 ntBASIC2.48□□□□□ -2.01
Ssbp4Q3U4B1 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Ssbp4Q3U4B1 Ighv2-8-201ENSMUST00000193935 262 ntBASIC2.48□□□□□ -2.01
Ssbp4Q3U4B1 Ighv1-32-201ENSMUST00000195149 351 ntBASIC2.48□□□□□ -2.01
Ssbp4Q3U4B1 Gm18551-201ENSMUST00000195594 642 ntBASIC2.48□□□□□ -2.01
Ssbp4Q3U4B1 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC2.48□□□□□ -2.01
Ssbp4Q3U4B1 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC2.48□□□□□ -2.01
Ssbp4Q3U4B1 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC2.48□□□□□ -2.01
Ssbp4Q3U4B1 Gm7422-201ENSMUST00000220115 640 ntBASIC2.48□□□□□ -2.01
Ssbp4Q3U4B1 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC2.48□□□□□ -2.01
Ssbp4Q3U4B1 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Ssbp4Q3U4B1 Mir184-201ENSMUST00000083662 69 ntBASIC2.48□□□□□ -2.01
Ssbp4Q3U4B1 Gm26164-201ENSMUST00000083793 104 ntBASIC2.48□□□□□ -2.01
Ssbp4Q3U4B1 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Ssbp4Q3U4B1 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Ssbp4Q3U4B1 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Ssbp4Q3U4B1 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC2.47□□□□□ -2.01
Ssbp4Q3U4B1 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC2.47□□□□□ -2.01
Ssbp4Q3U4B1 Gm14919-201ENSMUST00000120839 390 ntBASIC2.47□□□□□ -2.01
Ssbp4Q3U4B1 Gm14841-201ENSMUST00000121067 758 ntBASIC2.47□□□□□ -2.01
Ssbp4Q3U4B1 Gm7209-201ENSMUST00000122339 333 ntBASIC2.47□□□□□ -2.01
Ssbp4Q3U4B1 Gm24385-201ENSMUST00000122694 350 ntBASIC2.47□□□□□ -2.01
Ssbp4Q3U4B1 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
Ssbp4Q3U4B1 Gm6956-201ENSMUST00000134724 546 ntBASIC2.47□□□□□ -2.01
Ssbp4Q3U4B1 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC2.47□□□□□ -2.01
Ssbp4Q3U4B1 Gm8580-201ENSMUST00000160295 464 ntBASIC2.47□□□□□ -2.01
Ssbp4Q3U4B1 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC2.47□□□□□ -2.01
Ssbp4Q3U4B1 Gm20698-201ENSMUST00000175657 233 ntBASIC2.47□□□□□ -2.01
Ssbp4Q3U4B1 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC2.47□□□□□ -2.01
Ssbp4Q3U4B1 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
Ssbp4Q3U4B1 Gm42647-201ENSMUST00000195939 459 ntBASIC2.47□□□□□ -2.01
Ssbp4Q3U4B1 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC2.47□□□□□ -2.01
Ssbp4Q3U4B1 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC2.47□□□□□ -2.01
Ssbp4Q3U4B1 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC2.47□□□□□ -2.01
Ssbp4Q3U4B1 Gm44446-201ENSMUST00000204864 255 ntBASIC2.47□□□□□ -2.01
Ssbp4Q3U4B1 AC167721.1-201ENSMUST00000217088 279 ntBASIC2.47□□□□□ -2.01
Ssbp4Q3U4B1 Gm33654-201ENSMUST00000221704 215 ntBASIC2.47□□□□□ -2.01
Ssbp4Q3U4B1 Gm21937-201ENSMUST00000222825 218 ntBASIC2.47□□□□□ -2.01
Ssbp4Q3U4B1 AC130477.2-201ENSMUST00000228158 274 ntBASIC2.47□□□□□ -2.01
Ssbp4Q3U4B1 AC127371.1-202ENSMUST00000228923 306 ntBASIC2.47□□□□□ -2.01
Ssbp4Q3U4B1 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
Ssbp4Q3U4B1 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
Ssbp4Q3U4B1 Gm36944-201ENSMUST00000192257 2759 ntBASIC2.47□□□□□ -2.01
Ssbp4Q3U4B1 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Ssbp4Q3U4B1 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.01
Ssbp4Q3U4B1 Gm42659-201ENSMUST00000196955 1754 ntBASIC2.46□□□□□ -2.02
Ssbp4Q3U4B1 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
Ssbp4Q3U4B1 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC2.46□□□□□ -2.02
Ssbp4Q3U4B1 Gm22936-201ENSMUST00000103955 126 ntBASIC2.46□□□□□ -2.02
Ssbp4Q3U4B1 Gm13343-201ENSMUST00000116474 105 ntBASIC2.46□□□□□ -2.02
Ssbp4Q3U4B1 Gm12235-201ENSMUST00000118596 170 ntBASIC2.46□□□□□ -2.02
Ssbp4Q3U4B1 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC2.46□□□□□ -2.02
Ssbp4Q3U4B1 Gm15986-201ENSMUST00000122153 400 ntBASIC2.46□□□□□ -2.02
Ssbp4Q3U4B1 Gm25945-201ENSMUST00000122484 135 ntBASIC2.46□□□□□ -2.02
Ssbp4Q3U4B1 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC2.46□□□□□ -2.02
Ssbp4Q3U4B1 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC2.46□□□□□ -2.02
Ssbp4Q3U4B1 Gm23579-201ENSMUST00000158528 103 ntBASIC2.46□□□□□ -2.02
Ssbp4Q3U4B1 Gm26468-201ENSMUST00000158644 106 ntBASIC2.46□□□□□ -2.02
Ssbp4Q3U4B1 Gm8114-201ENSMUST00000172225 484 ntBASIC2.46□□□□□ -2.02
Ssbp4Q3U4B1 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
Ssbp4Q3U4B1 Mir5123-201ENSMUST00000177794 83 ntBASIC2.46□□□□□ -2.02
Ssbp4Q3U4B1 Mir6386-201ENSMUST00000183558 104 ntBASIC2.46□□□□□ -2.02
Ssbp4Q3U4B1 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC2.46□□□□□ -2.02
Ssbp4Q3U4B1 Mir6335-201ENSMUST00000184081 98 ntBASIC2.46□□□□□ -2.02
Ssbp4Q3U4B1 Mir7081-201ENSMUST00000184490 75 ntBASIC2.46□□□□□ -2.02
Ssbp4Q3U4B1 Gm28058-201ENSMUST00000186421 264 ntBASIC2.46□□□□□ -2.02
Ssbp4Q3U4B1 Mir6375-201ENSMUST00000197176 95 ntBASIC2.46□□□□□ -2.02
Ssbp4Q3U4B1 Gm44083-201ENSMUST00000203114 337 ntBASIC2.46□□□□□ -2.02
Ssbp4Q3U4B1 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC2.46□□□□□ -2.02
Ssbp4Q3U4B1 Gm44520-201ENSMUST00000205447 802 ntBASIC2.46□□□□□ -2.02
Ssbp4Q3U4B1 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC2.46□□□□□ -2.02
Ssbp4Q3U4B1 Olfr1285-201ENSMUST00000208523 903 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms