Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Gm25258-201ENSMUST00000083049 107 ntBASIC3.07□□□□□ -1.92
Col28a1Q2UY11 Gm24535-201ENSMUST00000083140 107 ntBASIC3.07□□□□□ -1.92
Col28a1Q2UY11 Gm23845-201ENSMUST00000083834 152 ntBASIC3.07□□□□□ -1.92
Col28a1Q2UY11 Gm22352-201ENSMUST00000083917 107 ntBASIC3.07□□□□□ -1.92
Col28a1Q2UY11 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Col28a1Q2UY11 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Col28a1Q2UY11 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Col28a1Q2UY11 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
Col28a1Q2UY11 Gm14421-201ENSMUST00000121755 1958 ntBASIC3.07□□□□□ -1.92
Col28a1Q2UY11 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.07□□□□□ -1.92
Col28a1Q2UY11 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.06□□□□□ -1.92
Col28a1Q2UY11 Gm23577-201ENSMUST00000103950 110 ntBASIC3.06□□□□□ -1.92
Col28a1Q2UY11 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
Col28a1Q2UY11 Gm14880-201ENSMUST00000117581 292 ntBASIC3.06□□□□□ -1.92
Col28a1Q2UY11 Gm13396-201ENSMUST00000120617 271 ntBASIC3.06□□□□□ -1.92
Col28a1Q2UY11 Gm14841-201ENSMUST00000121067 758 ntBASIC3.06□□□□□ -1.92
Col28a1Q2UY11 Gm22482-201ENSMUST00000122563 359 ntBASIC3.06□□□□□ -1.92
Col28a1Q2UY11 Gm13901-201ENSMUST00000137252 468 ntBASIC3.06□□□□□ -1.92
Col28a1Q2UY11 Gm26149-201ENSMUST00000157432 108 ntBASIC3.06□□□□□ -1.92
Col28a1Q2UY11 Gm24213-201ENSMUST00000158255 258 ntBASIC3.06□□□□□ -1.92
Col28a1Q2UY11 Gm22114-201ENSMUST00000177756 107 ntBASIC3.06□□□□□ -1.92
Col28a1Q2UY11 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC3.06□□□□□ -1.92
Col28a1Q2UY11 Mir6917-201ENSMUST00000184111 61 ntBASIC3.06□□□□□ -1.92
Col28a1Q2UY11 Mir8096-201ENSMUST00000184526 127 ntBASIC3.06□□□□□ -1.92
Col28a1Q2UY11 Gm27624-201ENSMUST00000185047 177 ntBASIC3.06□□□□□ -1.92
Col28a1Q2UY11 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC3.06□□□□□ -1.92
Col28a1Q2UY11 Gm6105-201ENSMUST00000200580 624 ntBASIC3.06□□□□□ -1.92
Col28a1Q2UY11 Gm43899-201ENSMUST00000203675 246 ntBASIC3.06□□□□□ -1.92
Col28a1Q2UY11 Gm43932-201ENSMUST00000204499 52 ntBASIC3.06□□□□□ -1.92
Col28a1Q2UY11 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
Col28a1Q2UY11 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC3.06□□□□□ -1.92
Col28a1Q2UY11 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Col28a1Q2UY11 AC130829.3-201ENSMUST00000222735 154 ntBASIC3.06□□□□□ -1.92
Col28a1Q2UY11 AC127371.1-202ENSMUST00000228923 306 ntBASIC3.06□□□□□ -1.92
Col28a1Q2UY11 Gm4987-201ENSMUST00000078326 408 ntBASIC3.06□□□□□ -1.92
Col28a1Q2UY11 Gm22997-201ENSMUST00000082845 107 ntBASIC3.06□□□□□ -1.92
Col28a1Q2UY11 Gm26055-201ENSMUST00000083038 107 ntBASIC3.06□□□□□ -1.92
Col28a1Q2UY11 Gm26329-201ENSMUST00000093723 110 ntBASIC3.06□□□□□ -1.92
Col28a1Q2UY11 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Col28a1Q2UY11 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Col28a1Q2UY11 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Col28a1Q2UY11 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Col28a1Q2UY11 AC164297.1-201ENSMUST00000224484 1561 ntBASIC3.05□□□□□ -1.92
Col28a1Q2UY11 Gm28634-201ENSMUST00000191087 2613 ntBASIC3.05□□□□□ -1.92
Col28a1Q2UY11 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Col28a1Q2UY11 AA413626-201ENSMUST00000121125 494 ntBASIC3.05□□□□□ -1.92
Col28a1Q2UY11 n-R5s192-201ENSMUST00000122577 119 ntBASIC3.05□□□□□ -1.92
Col28a1Q2UY11 Gm26027-201ENSMUST00000122725 268 ntBASIC3.05□□□□□ -1.92
Col28a1Q2UY11 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC3.05□□□□□ -1.92
Col28a1Q2UY11 Gm26088-201ENSMUST00000157896 131 ntBASIC3.05□□□□□ -1.92
Col28a1Q2UY11 Gm22257-201ENSMUST00000158687 301 ntBASIC3.05□□□□□ -1.92
Col28a1Q2UY11 Gm17072-201ENSMUST00000166673 658 ntBASIC3.05□□□□□ -1.92
Col28a1Q2UY11 Gm22348-201ENSMUST00000178674 79 ntBASIC3.05□□□□□ -1.92
Col28a1Q2UY11 Gm28534-201ENSMUST00000187744 676 ntBASIC3.05□□□□□ -1.92
Col28a1Q2UY11 Gm44391-201ENSMUST00000198490 93 ntBASIC3.05□□□□□ -1.92
Col28a1Q2UY11 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Col28a1Q2UY11 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC3.05□□□□□ -1.92
Col28a1Q2UY11 Gm45101-201ENSMUST00000208327 232 ntBASIC3.05□□□□□ -1.92
Col28a1Q2UY11 Gm45879-201ENSMUST00000212521 392 ntBASIC3.05□□□□□ -1.92
Col28a1Q2UY11 AC160863.1-201ENSMUST00000218412 317 ntBASIC3.05□□□□□ -1.92
Col28a1Q2UY11 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Col28a1Q2UY11 Gm37879-201ENSMUST00000193112 1995 ntBASIC3.05□□□□□ -1.92
Col28a1Q2UY11 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Col28a1Q2UY11 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
Col28a1Q2UY11 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Col28a1Q2UY11 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Col28a1Q2UY11 Gm23142-201ENSMUST00000101848 105 ntBASIC3.04□□□□□ -1.92
Col28a1Q2UY11 Gm26240-201ENSMUST00000101893 105 ntBASIC3.04□□□□□ -1.92
Col28a1Q2UY11 Gm24951-201ENSMUST00000102182 109 ntBASIC3.04□□□□□ -1.92
Col28a1Q2UY11 Gm11429-201ENSMUST00000119089 144 ntBASIC3.04□□□□□ -1.92
Col28a1Q2UY11 Gm13873-201ENSMUST00000119208 427 ntBASIC3.04□□□□□ -1.92
Col28a1Q2UY11 Gm7308-201ENSMUST00000121087 447 ntBASIC3.04□□□□□ -1.92
Col28a1Q2UY11 Gm6762-201ENSMUST00000121769 289 ntBASIC3.04□□□□□ -1.92
Col28a1Q2UY11 Gm14694-201ENSMUST00000121856 282 ntBASIC3.04□□□□□ -1.92
Col28a1Q2UY11 Gm12956-201ENSMUST00000122184 414 ntBASIC3.04□□□□□ -1.92
Col28a1Q2UY11 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC3.04□□□□□ -1.92
Col28a1Q2UY11 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
Col28a1Q2UY11 Gm23000-201ENSMUST00000157083 139 ntBASIC3.04□□□□□ -1.92
Col28a1Q2UY11 Gm23829-201ENSMUST00000157392 270 ntBASIC3.04□□□□□ -1.92
Col28a1Q2UY11 Gm22598-201ENSMUST00000157600 127 ntBASIC3.04□□□□□ -1.92
Col28a1Q2UY11 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Col28a1Q2UY11 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC3.04□□□□□ -1.92
Col28a1Q2UY11 Gm20660-201ENSMUST00000177515 289 ntBASIC3.04□□□□□ -1.92
Col28a1Q2UY11 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC3.04□□□□□ -1.92
Col28a1Q2UY11 Gm32340-201ENSMUST00000192883 259 ntBASIC3.04□□□□□ -1.92
Col28a1Q2UY11 Gm18453-201ENSMUST00000208000 626 ntBASIC3.04□□□□□ -1.92
Col28a1Q2UY11 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC3.04□□□□□ -1.92
Col28a1Q2UY11 Gm45772-201ENSMUST00000212961 240 ntBASIC3.04□□□□□ -1.92
Col28a1Q2UY11 AC124772.1-201ENSMUST00000221325 151 ntBASIC3.04□□□□□ -1.92
Col28a1Q2UY11 AC140477.1-201ENSMUST00000222354 246 ntBASIC3.04□□□□□ -1.92
Col28a1Q2UY11 Gm22571-201ENSMUST00000082984 70 ntBASIC3.04□□□□□ -1.92
Col28a1Q2UY11 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Col28a1Q2UY11 AC122850.1-201ENSMUST00000220380 5690 ntBASIC3.04□□□□□ -1.92
Col28a1Q2UY11 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Col28a1Q2UY11 Gm17976-201ENSMUST00000184037 1909 ntBASIC3.03□□□□□ -1.92
Col28a1Q2UY11 Gm45038-201ENSMUST00000207537 3838 ntBASIC3.03□□□□□ -1.92
Col28a1Q2UY11 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Col28a1Q2UY11 Gm25308-201ENSMUST00000104171 158 ntBASIC3.03□□□□□ -1.92
Col28a1Q2UY11 Gm14657-201ENSMUST00000117461 302 ntBASIC3.03□□□□□ -1.92
Col28a1Q2UY11 Gm11935-201ENSMUST00000118608 399 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms